; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g00960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g00960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionsmall ubiquitin-related modifier 1-like
Genome locationchr4:659506..659984
RNA-Seq ExpressionMoc04g00960
SyntenyMoc04g00960
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148070.1 small ubiquitin-related modifier 1-like [Momordica charantia]2.1e-51100Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC
        MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC

Query:  GFL
        GFL
Subjt:  GFL

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]2.7e-2766.32Show/hide
Query:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Subjt:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]3.2e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]5.5e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        RE  TRKPE+EP  +YVN+KVNGQDGSEVYFR+ K+TQL +LM +YC+RQ  +   +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]3.1e-3174.73Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        EE+ RKPES+PD EYVN+KVNGQDGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLLDGH I G QT E+LE++DGDEIDAM HHGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

TrEMBL top hitse value%identityAlignment
A0A565CRL3 Small ubiquitin-related modifier8.3e-2254.55Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN
        MS  +E  +KP  E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++L+++DGDEIDAM H  GGGGAN
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN

A0A5A7V249 Small ubiquitin-related modifier 11.5e-2667.37Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHH-GGGGGA
        EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   +AFL+DGH I G QT E+L L+DGDEIDAM HH GGGGGA
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHH-GGGGGA

A0A6J1D1W9 small ubiquitin-related modifier 1-like1.0e-51100Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC
        MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANC

Query:  GFL
        GFL
Subjt:  GFL

A0A6J1GLF8 Small ubiquitin-related modifier1.3e-2766.32Show/hide
Query:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Subjt:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X21.6e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt32.9e-1643.18Show/hide
Query:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        T + + +P  E++N+KV GQD +EV+F+++K T+  KLM  YC RQG+    + FL+DG  I  +QTP +L+++DGD+I+A+    GG
Subjt:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

P55852 Small ubiquitin-related modifier 11.8e-2150.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

P55857 Small ubiquitin-related modifier 13.6e-2253.12Show/hide
Query:  MSKREESTRKPE-SEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        MS   E  +KP   E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++LE++DGDEIDAM H  GG
Subjt:  MSKREESTRKPE-SEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q7ZTK7 Small ubiquitin-related modifier 2-A2.8e-1446.15Show/hide
Query:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        +++N+KV GQDGS V F+++++T L KLM +YC+RQG   R + F  DG  I    TP QLE++D D ID      GG
Subjt:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q9FLP6 Small ubiquitin-related modifier 24.7e-2251.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN
        MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG  N
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.3e-2250.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

AT5G55160.1 small ubiquitin-like modifier 23.3e-2351.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN
        MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG  N
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN

AT5G55160.2 small ubiquitin-like modifier 22.0e-2045.54Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEID
        MS   E  +KP+      ++N+KV GQ             DG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEID
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEID

Query:  AMNHHGGGGGAN
        AM H  GGG  N
Subjt:  AMNHHGGGGGAN

AT5G55170.1 small ubiquitin-like modifier 32.4e-1343.33Show/hide
Query:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN
        KP  +    +V +KV  QDG EV F+ +K   LKKLM  YC R+G      AF+ +G  I G +TP++L+++DGD IDA     GG  AN
Subjt:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGAN

AT5G55856.1 Ubiquitin-like superfamily protein7.7e-1240.26Show/hide
Query:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        ++ +KV  QD   VYFR+++  +L+K+M +Y  + G +   + FL DG+ I  NQTP +L L+D DEI+A     GG
Subjt:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCG
AAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGA
CCCCGGAGCAGCTGGAGCTGAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCGAACTGCGGTTTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGTTTATTTCAGGGTTCG
AAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACATCACCGGAAACCAGA
CCCCGGAGCAGCTGGAGCTGAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCGAACTGCGGTTTCCTCTGA
Protein sequenceShow/hide protein sequence
MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGANCGFL