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Moc04g01280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g01280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-CH-type domain-containing protein
Genome locationchr4:861518..861904
RNA-Seq ExpressionMoc04g01280
SyntenyMoc04g01280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051877.1 putative E3 ubiquitin ligase SUD1 [Cucumis melo var. makuwa]7.8e-4067.88Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE
        MI+Q+EGSSG  + +E  T+ A P RP+EAK V GG     V+ + EN   KRHGEE       ES  NCIIDIKS+GESVD EDSSEEKVCRICHL SE
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE

Query:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        H+SI SDLI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

XP_008463280.1 PREDICTED: probable E3 ubiquitin ligase SUD1 [Cucumis melo]7.8e-4067.88Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE
        MI+Q+EGSSG  + +E  T+ A P RP+EAK V GG     V+ + EN   KRHGEE       ES  NCIIDIKS+GESVD EDSSEEKVCRICHL SE
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE

Query:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        H+SI SDLI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

XP_011653704.1 probable E3 ubiquitin ligase SUD1 isoform X1 [Cucumis sativus]5.0e-3965.94Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE------SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSS
        MI+Q+EGSSG  + DE  T++A P RP+EAK V GG     V+ + EN   KRHG E        ESH NCIIDIK++GESVD EDSSEEKVCRICHL S
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE------SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSS

Query:  EHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        E++SI S+LI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  EHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

XP_022147939.1 uncharacterized protein LOC111016745 [Momordica charantia]7.5e-67100Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI
        MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI

Query:  QLGCRCKDELGISHRDCAEIWFMHRGNR
        QLGCRCKDELGISHRDCAEIWFMHRGNR
Subjt:  QLGCRCKDELGISHRDCAEIWFMHRGNR

XP_038887762.1 probable E3 ubiquitin ligase SUD1 [Benincasa hispida]8.9e-4471.32Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQN--HNENEAGKRHGEESK------ESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEH
        MIKQDEGSSG  + +ES T+ A P RP EAK V GG  +N  H   E GKRHGEE +      ES+ NCIIDIKS+G S+DGEDSSEEKVCRICHLSSEH
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQN--HNENEAGKRHGEESK------ESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEH

Query:  QSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        +SI SDLI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  QSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

TrEMBL top hitse value%identityAlignment
A0A0A0LUV6 RING-CH-type domain-containing protein2.4e-3965.94Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE------SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSS
        MI+Q+EGSSG  + DE  T++A P RP+EAK V GG     V+ + EN   KRHG E        ESH NCIIDIK++GESVD EDSSEEKVCRICHL S
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE------SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSS

Query:  EHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        E++SI S+LI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  EHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

A0A1S3CJ88 probable E3 ubiquitin ligase SUD13.8e-4067.88Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE
        MI+Q+EGSSG  + +E  T+ A P RP+EAK V GG     V+ + EN   KRHGEE       ES  NCIIDIKS+GESVD EDSSEEKVCRICHL SE
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE

Query:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        H+SI SDLI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

A0A5D3D2W7 Putative E3 ubiquitin ligase SUD13.8e-4067.88Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE
        MI+Q+EGSSG  + +E  T+ A P RP+EAK V GG     V+ + EN   KRHGEE       ES  NCIIDIKS+GESVD EDSSEEKVCRICHL SE
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE-----SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSE

Query:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        H+SI SDLI LGC CKDELGISHRDCAEIWFMHRGNR
Subjt:  HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

A0A6J1D2I2 uncharacterized protein LOC1110167453.6e-67100Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI
        MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI

Query:  QLGCRCKDELGISHRDCAEIWFMHRGNR
        QLGCRCKDELGISHRDCAEIWFMHRGNR
Subjt:  QLGCRCKDELGISHRDCAEIWFMHRGNR

A0A6J1ESF7 uncharacterized protein LOC111437147 isoform X12.8e-3560.94Show/hide
Query:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI
        MI+Q+EGSS T + DE   V+  P RP+EAKEV       H     G        ESHH CIIDIKS+GES+D  +SS EKVCRICHLSS+ +S++SDL+
Subjt:  MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLI

Query:  QLGCRCKDELGISHRDCAEIWFMHRGNR
         LGCRCK ELG+SHRDCAEIWFMHRGNR
Subjt:  QLGCRCKDELGISHRDCAEIWFMHRGNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein2.4e-1034.26Show/hide
Query:  QEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEH--------QSIASDLIQLGCRCKDELGISHRDCAE
        +E  +    V  N  E++  K    ++KE H    ID+   G          E++CRICH  S+         +S++ +LI++GC+CK+ELG++H  CAE
Subjt:  QEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEH--------QSIASDLIQLGCRCKDELGISHRDCAE

Query:  IWFMHRGN
         WF  RGN
Subjt:  IWFMHRGN

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein4.0e-1044.44Show/hide
Query:  SGESVDGEDSS--EEKVCRICHLSSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        S   +D +D++   EK CRICHL  E  +     I+LGC CKD+L ++HR CAE WF  +G++
Subjt:  SGESVDGEDSS--EEKVCRICHLSSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

AT5G01070.1 RING/FYVE/PHD zinc finger superfamily protein2.0e-0945.07Show/hide
Query:  IDIKSSGESVDGED--SSEEKVCRICHL---SSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        +D ++  ESV       S EK CRICHL   SS H+    D + LGC CKD+LG  H+ CA+ WF  +GN+
Subjt:  IDIKSSGESVDGED--SSEEKVCRICHL---SSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein2.0e-0945.07Show/hide
Query:  IDIKSSGESVDGED--SSEEKVCRICHL---SSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR
        +D ++  ESV       S EK CRICHL   SS H+    D + LGC CKD+LG  H+ CA+ WF  +GN+
Subjt:  IDIKSSGESVDGED--SSEEKVCRICHL---SSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNR

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein5.8e-0945.28Show/hide
Query:  SSEEKVCRICHLSSEHQSIASDL-IQLGCRCKDELGISHRDCAEIWFMHRGNR
        S  E+ CRICH+S +  ++ S + I+LGC CK +L  +H+ CAE WF  +GN+
Subjt:  SSEEKVCRICHLSSEHQSIASDL-IQLGCRCKDELGISHRDCAEIWFMHRGNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAACAAGATGAAGGATCAAGCGGGACACCAAATCGAGATGAATCTGTGACAGTTCTTGCATTGCCACCGAGACCTCAAGAAGCAAAAGAAGTAACCGGAGGGGT
GGTGCAGAACCACAATGAGAATGAGGCTGGCAAGAGGCATGGAGAGGAATCGAAAGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATG
GTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTC
GGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAACAAGATGAAGGATCAAGCGGGACACCAAATCGAGATGAATCTGTGACAGTTCTTGCATTGCCACCGAGACCTCAAGAAGCAAAAGAAGTAACCGGAGGGGT
GGTGCAGAACCACAATGAGAATGAGGCTGGCAAGAGGCATGGAGAGGAATCGAAAGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATG
GTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTC
GGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGGTAA
Protein sequenceShow/hide protein sequence
MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLIQLGCRCKDEL
GISHRDCAEIWFMHRGNR