CuGenDBv2

Gene ID	Moc04g01740
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Epidermal patterning factor-like protein
Genome location	chr4:1117371..1117752
RNA-Seq Expression	Moc04g01740
Synteny	Moc04g01740
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0010375 - stomatal complex patterning (biological process) GO:2000122 - negative regulation of stomatal complex development (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6572355.1 Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-29

66.97

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQ-------KQKTAAAG-----TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCM
        MK S WF ++  IAF +FP PISS+ ISHQNS+         + AA G     TV VAGS LPDCSHAC SCSPCRLVMISFVCA++QEAETCPMAYRCM
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQ-------KQKTAAAG-----TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCM

Query:  CNNKSYPVP
        CNNKSYP+P
Subjt:  CNNKSYPVP

XP_004136818.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus]

8.3e-26

60.34

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Query:  LLVIAFSIFPPPISSRPISHQNSQ--------------------KQKTA--------AAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETC
        +L IAF +F  PISSR IS QNS+                    K+K A           TV VAGS LPDCSHACGSCSPCRLVMISFVCA++QEAETC
Subjt:  LLVIAFSIFPPPISSRPISHQNSQ--------------------KQKTA--------AAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETC

Query:  PMAYRCMCNNKSYPVP
        PMAYRCMCNNKSYPVP
Subjt:  PMAYRCMCNNKSYPVP

XP_022148033.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Momordica charantia]

2.0e-48

100

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

XP_022953138.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita moschata]

1.7e-31

72.73

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAG--TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        MK S WF ++  IAF +FP PISS+ ISHQNSQ+      G  TV VAGS LPDCSHAC SCSPCRLVMISFVCA++QEAETCPMAYRCMCNNKSYP+P
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAG--TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

XP_038888568.1 protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]

4.0e-28

60.83

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNS------------------QKQKTAAAG-----TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQE
        M  S WF +L  IAF +FP PISSR IS +NS                    +K A  G     TV VAGS LPDCSHACGSCSPCRLVMISFVCA++QE
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNS------------------QKQKTAAAG-----TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQE

Query:  AETCPMAYRCMCNNKSYPVP
        AETCPMAYRCMCNNKSYP+P
Subjt:  AETCPMAYRCMCNNKSYPVP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5P8 Epidermal patterning factor-like protein

4.0e-26

60.34

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Query:  LLVIAFSIFPPPISSRPISHQNSQ--------------------KQKTA--------AAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETC
        +L IAF +F  PISSR IS QNS+                    K+K A           TV VAGS LPDCSHACGSCSPCRLVMISFVCA++QEAETC
Subjt:  LLVIAFSIFPPPISSRPISHQNSQ--------------------KQKTA--------AAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETC

Query:  PMAYRCMCNNKSYPVP
        PMAYRCMCNNKSYPVP
Subjt:  PMAYRCMCNNKSYPVP

A0A6J1D2Y3 Epidermal patterning factor-like protein

9.8e-49

100

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

A0A6J1ESJ9 Epidermal patterning factor-like protein

9.9e-25

57.02

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Query:  LLVIAFSIFPPPISSRPISHQNSQK-------------------------QKTAAAG--------TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQ
        L+ IAF +FP PISSR IS  NS++                          K  AA         TV VAGS LPDCSHACGSCSPCRLVMISFVCA + 
Subjt:  LLVIAFSIFPPPISSRPISHQNSQK-------------------------QKTAAAG--------TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQ

Query:  EAETCPMAYRCMCNNKSYPVP
        EAETCPMAYRCMCNNKSYPVP
Subjt:  EAETCPMAYRCMCNNKSYPVP

A0A6J1GMI9 Epidermal patterning factor-like protein

8.3e-32

72.73

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Query:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAG--TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        MK S WF ++  IAF +FP PISS+ ISHQNSQ+      G  TV VAGS LPDCSHAC SCSPCRLVMISFVCA++QEAETCPMAYRCMCNNKSYP+P
Subjt:  MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAG--TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

A0A6J1JEL1 Epidermal patterning factor-like protein

4.4e-25

60.18

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Query:  LLVIAFSIFPPPISSRPISHQNSQK---QKTAAAG----------------------TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMA
        L+ IAF +FP PISSR IS  NS++    K A                         TV VAGS LPDCSHACGSCSPCRLVMISFVCA + EAETCPMA
Subjt:  LLVIAFSIFPPPISSRPISHQNSQK---QKTAAAG----------------------TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMA

Query:  YRCMCNNKSYPVP
        YRCMCNNKSYPVP
Subjt:  YRCMCNNKSYPVP

SwissProt top hits

e value

%identity

Alignment

C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 7

1.3e-10

53.85

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Query:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        +GS +PDCS+ACG C PC+LV+IS  C+A   +E CP+ Y+C+C  K Y VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 2

1.7e-10

47.22

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Query:  QNSQKQKTAAAGTVAV----AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        Q   K++ +  G V +     GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  QNSQKQKTAAAGTVAV----AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 1

1.0e-26

70.37

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Query:  PISSRPISHQ----NSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        P SS P  H      + K++     TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  PISSRPISHQ----NSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Arabidopsis top hits

e value

%identity

Alignment

AT1G34245.1 Putative membrane lipoprotein

1.2e-11

47.22

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Query:  QNSQKQKTAAAGTVAV----AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        Q   K++ +  G V +     GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  QNSQKQKTAAAGTVAV----AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

AT1G71866.1 LOCATED IN: endomembrane system

9.5e-12

53.85

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Query:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        +GS +PDCS+ACG C PC+LV+IS  C+A   +E CP+ Y+C+C  K Y VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

AT2G20875.1 epidermal patterning factor 1

7.2e-28

70.37

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Query:  PISSRPISHQ----NSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        P SS P  H      + K++     TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  PISSRPISHQ----NSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Sequences

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CDS sequence

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ATGAAGGCTTCAGCTTGGTTTTGTCTACTCCTCGTCATTGCTTTCTCAATATTCCCACCACCCATTTCCTCCAGACCCATTTCCCACCAAAACTCACAGAAGCAGAAGAC
GGCGGCGGCGGGGACGGTTGCAGTGGCGGGGTCGAGATTGCCGGATTGCTCCCACGCGTGCGGCTCGTGCTCGCCGTGCAGGCTTGTGATGATCAGTTTCGTTTGTGCGG
CGGTGCAAGAGGCGGAGACATGTCCCATGGCTTACAGATGCATGTGTAATAACAAGTCATATCCTGTTCCTTAG

mRNA sequence

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Protein sequence

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MKASAWFCLLLVIAFSIFPPPISSRPISHQNSQKQKTAAAGTVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Moc04g01740 (gene) of Bitter gourd (OHB3-1) v2 genome