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Moc04g02420 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g02420
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionVascular-related unknown protein 1
Genome locationchr4:1490845..1494117
RNA-Seq ExpressionMoc04g02420
SyntenyMoc04g02420
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455422.1 PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]5.5e-3352.33Show/hide
Query:  NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLT
        N +A P    S    +S  G  E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  DD N   N+  P        +VG V + D PK      K T
Subjt:  NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLT

Query:  RTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD
        RTQKIF+ DDSL+DTATSP+HSPKV DLKV+T   N +FDDH  I     GS   MG  YS  EK V +A     +++GLCL PFSMLL+Y +
Subjt:  RTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD

XP_011658705.1 vascular-related unknown protein 1 [Cucumis sativus]5.5e-3352.04Show/hide
Query:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFK
        ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  DD N   N+  P+       ++G V + D PK      
Subjt:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFK

Query:  KLTRTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD
        K TRTQKIF+ DDSL+DTATSP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     +++GLCLFPFSMLL+Y +
Subjt:  KLTRTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]7.8e-96100Show/hide
Query:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI
        MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI
Subjt:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI

Query:  FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
        FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
Subjt:  FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]7.0e-2057.03Show/hide
Query:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR

Query:  TQKIFQDDSLEDTATSPVHSPKVADLKV
        TQ+IF DDSLEDTATSPV +PKVADL V
Subjt:  TQKIFQDDSLEDTATSPVHSPKVADLKV

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]4.5e-3551.03Show/hide
Query:  MEKN------KDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPT-----LCSVGEVFLDSPKKLI
        MEKN       D+PP    ++++A +  G  E+EESGWTDYLEDYFSS     E S+LCSSIGSCS   N   N+ +P         +G++  D P KL 
Subjt:  MEKN------KDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPT-----LCSVGEVFLDSPKKLI

Query:  CFKKLTRTQKIFQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD
         FKK TRTQKIF+DDSL+DTATSP+HSPKVADLKVKT H N +FD    + GS   +G  YS+ E GV ++     +++GLCLFP SMLL+Y +
Subjt:  CFKKLTRTQKIFQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein2.7e-3352.04Show/hide
Query:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFK
        ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  DD N   N+  P+       ++G V + D PK      
Subjt:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFK

Query:  KLTRTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD
        K TRTQKIF+ DDSL+DTATSP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     +++GLCLFPFSMLL+Y +
Subjt:  KLTRTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD

A0A1S3C0F7 uncharacterized protein LOC1034955852.7e-3352.33Show/hide
Query:  NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLT
        N +A P    S    +S  G  E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  DD N   N+  P        +VG V + D PK      K T
Subjt:  NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLT

Query:  RTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD
        RTQKIF+ DDSL+DTATSP+HSPKV DLKV+T   N +FDDH  I     GS   MG  YS  EK V +A     +++GLCL PFSMLL+Y +
Subjt:  RTQKIFQ-DDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQD

A0A6J1C2S1 uncharacterized protein LOC1110079243.8e-96100Show/hide
Query:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI
        MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI
Subjt:  MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKI

Query:  FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
        FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
Subjt:  FQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ

A0A6J1ESI7 Uncharacterized protein3.4e-2057.03Show/hide
Query:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR

Query:  TQKIFQDDSLEDTATSPVHSPKVADLKV
        TQ+IF DDSLEDTATSPV +PKVADL V
Subjt:  TQKIFQDDSLEDTATSPVHSPKVADLKV

A0A6J1JN61 Uncharacterized protein1.7e-1957.03Show/hide
Query:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR
        +KN    P  E S++AA    G  E EESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N L+P  CSVGEV LD+P KL    K T 
Subjt:  EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCSDD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTR

Query:  TQKIFQDDSLEDTATSPVHSPKVADLKV
        TQ IF DDSLEDTATSPV +PKVAD  V
Subjt:  TQKIFQDDSLEDTATSPVHSPKVADLKV

SwissProt top hitse value%identityAlignment
Q9LSZ3 Vascular-related unknown protein 12.6e-0931.22Show/hide
Query:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV
        GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S      G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV
Subjt:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV

Query:  HSPKVADLKVKTKHVNL---KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCLFPFSMLLHY
        +SPKV+      +H+     K +D+      MG+    G+  +    GG                      DL+ RGLC+ P SML ++
Subjt:  HSPKVADLKVKTKHVNL---KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCLFPFSMLLHY

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein1.2e-0638.68Show/hide
Query:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV
        GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S      G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV
Subjt:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV

Query:  HSPKVA
        +SPKV+
Subjt:  HSPKVA

AT3G21710.2 unknown protein1.8e-1031.22Show/hide
Query:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV
        GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S      G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV
Subjt:  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPV

Query:  HSPKVADLKVKTKHVNL---KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCLFPFSMLLHY
        +SPKV+      +H+     K +D+      MG+    G+  +    GG                      DL+ RGLC+ P SML ++
Subjt:  HSPKVADLKVKTKHVNL---KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCLFPFSMLLHY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACAAGGATGCGCCGCCGCTGGAAGAGCCCTCCGCCGCCGCCGCCAATTCCGGCGGAGGAGGAGGAGAAGAAGAAGAGAGCGGTTGGACGGATTACTTGGA
AGATTATTTCAGCTCCTCAGATATTGAGAGAGAGAAGAGTTTTTTGTGTTCGAGTATTGGGAGCTGTTCAGACGATGGCAATACGACGACCAATGTTTTAAGTCCAACGT
TGTGTTCTGTTGGGGAAGTTTTTTTGGATTCTCCTAAGAAGCTAATTTGTTTCAAGAAATTAACAAGAACCCAGAAGATTTTTCAAGATGATTCCTTGGAAGATACCGCT
ACTTCTCCTGTCCACAGTCCAAAAGTTGCTGATTTGAAAGTGAAAACAAAACATGTAAATCTGAAGTTTGATGATCACGCGATGATTCGTGGCTCCATGGGGAGCGATTA
CTCAGAGGGAGAAAAAGGTGTTTGTACAGCTGCTGGTGGAGACCTAAAGCAAAGAGGCCTTTGCTTGTTTCCTTTTTCCATGCTTCTTCATTACCAAGATTTCATGTGTG
GGGGTAAAACCAAGTGTCCTCTCCTGTTGAGATCAGCGCAAAACTCTTATGTTGAGATGCGTGTGTCCGAGCTTCGCGCTGAGGATGAAGAGACAATGGCCCAAGAACAG
AGTTCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAACAAGGATGCGCCGCCGCTGGAAGAGCCCTCCGCCGCCGCCGCCAATTCCGGCGGAGGAGGAGGAGAAGAAGAAGAGAGCGGTTGGACGGATTACTTGGA
AGATTATTTCAGCTCCTCAGATATTGAGAGAGAGAAGAGTTTTTTGTGTTCGAGTATTGGGAGCTGTTCAGACGATGGCAATACGACGACCAATGTTTTAAGTCCAACGT
TGTGTTCTGTTGGGGAAGTTTTTTTGGATTCTCCTAAGAAGCTAATTTGTTTCAAGAAATTAACAAGAACCCAGAAGATTTTTCAAGATGATTCCTTGGAAGATACCGCT
ACTTCTCCTGTCCACAGTCCAAAAGTTGCTGATTTGAAAGTGAAAACAAAACATGTAAATCTGAAGTTTGATGATCACGCGATGATTCGTGGCTCCATGGGGAGCGATTA
CTCAGAGGGAGAAAAAGGTGTTTGTACAGCTGCTGGTGGAGACCTAAAGCAAAGAGGCCTTTGCTTGTTTCCTTTTTCCATGCTTCTTCATTACCAAGATTTCATGTGTG
GGGGTAAAACCAAGTGTCCTCTCCTGTTGAGATCAGCGCAAAACTCTTATGTTGAGATGCGTGTGTCCGAGCTTCGCGCTGAGGATGAAGAGACAATGGCCCAAGAACAG
AGTTCAACTTAA
Protein sequenceShow/hide protein sequence
MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTA
TSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQDFMCGGKTKCPLLLRSAQNSYVEMRVSELRAEDEETMAQEQ
SST