; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g02470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g02470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description50S ribosomal protein L6
Genome locationchr4:1526897..1529943
RNA-Seq ExpressionMoc04g02470
SyntenyMoc04g02470
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]5.1e-11193.49Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

XP_022136314.1 50S ribosomal protein L6, chloroplastic [Momordica charantia]3.8e-122100Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_022930652.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita moschata]2.0e-11594.69Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_022988916.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita maxima]3.8e-11493.36Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_023530191.1 50S ribosomal protein L6, chloroplastic [Cucurbita pepo subsp. pepo]2.9e-11493.36Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS ST+PV HI  LR+TIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+D+GILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A1S3C0W5 50S ribosomal protein L6, chloroplastic2.5e-11193.49Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic1.8e-122100Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

A0A6J1ER61 50S ribosomal protein L6, chloroplastic isoform X29.7e-11694.69Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like2.1e-11093.95Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF++STMPV H G+LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A6J1JIK5 50S ribosomal protein L6, chloroplastic isoform X21.8e-11493.36Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L64.0e-5057.54Show/hide
Query:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK PI +P  V + ++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A+Q HGL RTL  NMV GVS+GFEKKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

B2ITP1 50S ribosomal protein L66.8e-5056.18Show/hide
Query:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK+PI +P+ V +A+ G ++ VKGP GELS      V + +E   IL V +  ETR +KQ+HGL RTL  NMV GVS+GF+++L++ GVGYRA L+G
Subjt:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK
        ++LVLN+G+SH V++  PDG+Q  VE  T + VSGYDK  +G  AA IR  RPPEPYKGKG++YA EVVRRK GK GK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK

B7KI01 50S ribosomal protein L61.2e-4955.31Show/hide
Query:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK+PI +P+ V + + G  + VKGP GEL    P  V +E +D G+LRV +  ++R A+Q HGL RTL  NMV GVS+GFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  EVVRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic7.0e-9576.55Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MAS+L   FQ    RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNV IAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
         VETRRA QMHGLFRTLTDNMVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKY+DE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic7.2e-9277.67Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        S+ +S FLG K   S S +PV  IG  RK+++CKESRIGKQPI VP+NV IA++GQDLKVKGPLGELSI YPREV +E+++SG LRV+KAVETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRA +EGKDL+L+LGFSHPVRMAIPD LQVKVEENT++TVSG DK  +GQFAA+IR WRPPEPYKGKGV+Y 
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family4.9e-9676.55Show/hide
Query:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK
        MAS+L   FQ    RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNV IAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK
Subjt:  MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKK

Query:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
         VETRRA QMHGLFRTLTDNMVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  AVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKY+DE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein1.5e-2047.96Show/hide
Query:  FEKKLQLVGVGYRAMLE--GKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK
        F + L++VGVGY+A  E  G+ L L LG+SH V +A+P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DEVV++K+GK  K
Subjt:  FEKKLQLVGVGYRAMLE--GKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACGCTAACCATCCCATTCCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCT
CTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAATCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTC
CTTTGGGAGAGCTCTCAATACTTTATCCAAGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATG
CATGGGCTTTTCAGGACGCTTACAGATAATATGGTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAA
AGACTTGGTATTAAATCTCGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATA
AATGTGCCATTGGTCAGTTTGCCGCTTCTATTAGACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGG
AAAGCAGGGAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACGCTAACCATCCCATTCCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCT
CTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAATCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTC
CTTTGGGAGAGCTCTCAATACTTTATCCAAGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATG
CATGGGCTTTTCAGGACGCTTACAGATAATATGGTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAA
AGACTTGGTATTAAATCTCGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATA
AATGTGCCATTGGTCAGTTTGCCGCTTCTATTAGACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGG
AAAGCAGGGAAGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQM
HGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEG
KAGKKK