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Moc04g02730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g02730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBeta-adaptin-like protein
Genome locationchr4:1723411..1723958
RNA-Seq ExpressionMoc04g02730
SyntenyMoc04g02730
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030131 - clathrin adaptor complex (cellular component)
GO:0030276 - clathrin binding (molecular function)
InterPro domainsIPR009028 - Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR012295 - TBP domain superfamily
IPR015151 - Beta-adaptin appendage, C-terminal subdomain
IPR026739 - AP complex subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042741.1 beta-adaptin-like protein B [Cucumis melo var. makuwa]3.6e-5285.47Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPAIV+ NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP L+ELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLK+
Subjt:  VEMAPLFFETLETLLKE

KAG7036027.1 Beta-adaptin-like protein C, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-5284.62Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPA+ + NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCA+KTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

XP_008437309.1 PREDICTED: beta-adaptin-like protein B [Cucumis melo]3.6e-5285.47Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPAIV+ NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP L+ELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLK+
Subjt:  VEMAPLFFETLETLLKE

XP_022157680.1 beta-adaptin-like protein B [Momordica charantia]2.5e-5388.89Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MHVFFTEDGRMER NFLETWRSLPDSNEVS+DFPAIV+NN+E+VLDRLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
         +MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

XP_023534773.1 beta-adaptin-like protein B [Cucurbita pepo subsp. pepo]6.2e-5284.62Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPA+ + NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCA+KTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

TrEMBL top hitse value%identityAlignment
A0A1S3ATD0 Beta-adaptin-like protein1.8e-5285.47Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPAIV+ NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP L+ELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLK+
Subjt:  VEMAPLFFETLETLLKE

A0A5A7TME9 Beta-adaptin-like protein1.8e-5285.47Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPAIV+ NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP L+ELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLK+
Subjt:  VEMAPLFFETLETLLKE

A0A6J1DTS4 Beta-adaptin-like protein1.2e-5388.89Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MHVFFTEDGRMER NFLETWRSLPDSNEVS+DFPAIV+NN+E+VLDRLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCAIKTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
         +MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

A0A6J1H2F3 Beta-adaptin-like protein3.0e-5284.62Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNEVS+DFPA+ + NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCA+KTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

A0A6J1JZ69 Beta-adaptin-like protein3.9e-5283.76Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        MH+FFT+DGRMER NFLETWRSLPDSNE+S+DFPA+ + NVEAVL+RLAATNMFFIAKRKH N DVFYFSTKIPRGIP LVELTTV+GS GLKCA+KTPN
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLKE
        ++MAPLFFE LETLLKE
Subjt:  VEMAPLFFETLETLLKE

SwissProt top hitse value%identityAlignment
O35643 AP-1 complex subunit beta-11.6e-1335.29Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIK
        +HV F EDG+M+R  FL TW+ + + NE     RD P     N EA  ++L ++N+F +AKR     D+ Y S K+  GI +L EL    G+     ++K
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIK

Query:  TPNVEMAPLFFETLETLLK
            E++   ++  ET+LK
Subjt:  TPNVEMAPLFFETLETLLK

O81742 Beta-adaptin-like protein C6.0e-4265.52Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        ++  F+EDGRMERG FLETW+SLPDSNEV ++FP I + +VE+ LD LAA+NMFFIAKRK+GN DV Y S K+PRGIP L+ELT ++G  GLKCA+KTP 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLK
         E+APLFFE +E L K
Subjt:  VEMAPLFFETLETLLK

P52303 AP-1 complex subunit beta-11.2e-1336.13Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIK
        +HV F EDG+M+R  FL TW+ +P+ NE     RD P     N EA   +L ++N+F +AKR     D+ Y S K+  GI +L EL    G+     ++K
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIK

Query:  TPNVEMAPLFFETLETLLK
            E++    +  ET+LK
Subjt:  TPNVEMAPLFFETLETLLK

Q10567 AP-1 complex subunit beta-12.6e-1335.25Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHG---LKC
        +H+ F EDG+M+R  FL TW+ +P+ NE     RD P     N EA   +L ++N+F +AKR     D+ Y S K+  GI +L EL    G+     L+ 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVS---RDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHG---LKC

Query:  AIKTPNVEMAPLFFETLETLLK
        ++K    E++   ++  ET+LK
Subjt:  AIKTPNVEMAPLFFETLETLLK

Q9SUS3 Beta-adaptin-like protein B1.6e-3963.79Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        +H  F EDGRMERG FLETWRSLPDSNEV ++FP I + +VE+ ++ L A NMFFIAKRK+GN DV Y S K PR +P L+ELT ++G  GLKCA+KTP 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLK
         E+APLFFE LE L K
Subjt:  VEMAPLFFETLETLLK

Arabidopsis top hitse value%identityAlignment
AT4G11380.1 Adaptin family protein1.2e-4063.79Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        +H  F EDGRMERG FLETWRSLPDSNEV ++FP I + +VE+ ++ L A NMFFIAKRK+GN DV Y S K PR +P L+ELT ++G  GLKCA+KTP 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLK
         E+APLFFE LE L K
Subjt:  VEMAPLFFETLETLLK

AT4G11380.2 Adaptin family protein1.2e-4063.79Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        +H  F EDGRMERG FLETWRSLPDSNEV ++FP I + +VE+ ++ L A NMFFIAKRK+GN DV Y S K PR +P L+ELT ++G  GLKCA+KTP 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLK
         E+APLFFE LE L K
Subjt:  VEMAPLFFETLETLLK

AT4G23460.1 Adaptin family protein4.3e-4365.52Show/hide
Query:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN
        ++  F+EDGRMERG FLETW+SLPDSNEV ++FP I + +VE+ LD LAA+NMFFIAKRK+GN DV Y S K+PRGIP L+ELT ++G  GLKCA+KTP 
Subjt:  MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPN

Query:  VEMAPLFFETLETLLK
         E+APLFFE +E L K
Subjt:  VEMAPLFFETLETLLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGTTTTCTTCACCGAAGACGGGAGGATGGAGCGTGGAAACTTTCTCGAGACTTGGAGGTCCCTTCCAGATTCAAATGAGGTTTCTAGAGATTTCCCCGCCATTGT
TGTAAACAATGTTGAGGCCGTTCTCGACCGACTGGCTGCAACGAACATGTTCTTCATTGCCAAAAGGAAGCACGGGAACCATGATGTATTCTACTTCTCTACTAAAATCC
CCAGAGGAATTCCTCTCTTGGTTGAACTTACCACAGTTCTGGGAAGCCATGGATTGAAATGCGCCATCAAAACTCCAAACGTTGAAATGGCACCACTCTTCTTCGAAACC
TTGGAGACCCTTCTCAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACGTTTTCTTCACCGAAGACGGGAGGATGGAGCGTGGAAACTTTCTCGAGACTTGGAGGTCCCTTCCAGATTCAAATGAGGTTTCTAGAGATTTCCCCGCCATTGT
TGTAAACAATGTTGAGGCCGTTCTCGACCGACTGGCTGCAACGAACATGTTCTTCATTGCCAAAAGGAAGCACGGGAACCATGATGTATTCTACTTCTCTACTAAAATCC
CCAGAGGAATTCCTCTCTTGGTTGAACTTACCACAGTTCTGGGAAGCCATGGATTGAAATGCGCCATCAAAACTCCAAACGTTGAAATGGCACCACTCTTCTTCGAAACC
TTGGAGACCCTTCTCAAGGAATGA
Protein sequenceShow/hide protein sequence
MHVFFTEDGRMERGNFLETWRSLPDSNEVSRDFPAIVVNNVEAVLDRLAATNMFFIAKRKHGNHDVFYFSTKIPRGIPLLVELTTVLGSHGLKCAIKTPNVEMAPLFFET
LETLLKE