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Moc04g03040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g03040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionglycine-rich protein 3 short isoform-like
Genome locationchr4:1914643..1915168
RNA-Seq ExpressionMoc04g03040
SyntenyMoc04g03040
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3455392.1 hypothetical protein FNV43_RR00015 [Rhamnella rubrinervis]6.2e-1858.4Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYG---GGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYG-GGRHCHHGC
        M SKAF+ LGLL A+VVL+SS+V+ARDL  ET   TD   +  +   + G G Y    GGY  GH   GGGYPGHGG  GGGYPG G  G GG  CH+GC
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYG---GGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYG-GGRHCHHGC

Query:  C--GYHG-SCGRCCSYAGEAVDVEP
        C  GY+G  C RCCSYAGEAVD EP
Subjt:  C--GYHG-SCGRCCSYAGEAVDVEP

KAG8369563.1 hypothetical protein BUALT_Bualt14G0026400 [Buddleja alternifolia]2.3e-2054.55Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKG-----ETVMETDG-VEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGG------
        M SKA + LGL  A V+L+SS+V ARDL       +T  ET+G V DAK      G G+YGGGY  G   YGGGYPG GG YGGGYPGRG YGG      
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKG-----ETVMETDG-VEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGG------

Query:  ----GRHCHHGCCG---YHGSCGRCCSYAGEAVDVEPQAKPHN
            G +C +GCCG   Y GSC RCCS+AGE  D + QAKPHN
Subjt:  ----GRHCHHGCCG---YHGSCGRCCSYAGEAVDVEPQAKPHN

PON59146.1 Glycine rich protein [Trema orientale]1.3e-1851.02Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDL----KGE------TVMETDGVEDAK----------DRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGY
        M SK F+LLGL  A+++L+SS+V ARDL     GE      +  E   V+DAK             Y  G G YGGGY  G   YGGGYPG  G YGGGY
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDL----KGE------TVMETDGVEDAK----------DRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGY

Query:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN
        PGRG YGG   C++GCC   Y+G  C RCCSYAGEAVD + +AKP N
Subjt:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN

XP_015881488.1 cold and drought-regulated protein CORA-like [Ziziphus jujuba]6.2e-1851.03Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGET-----VMETDGVEDAK-DRSYDRGHGHYG--GGYDRGHSRYG---GGYPGHGG-------HYGGGYPG
        M S+  I LGL+FAVV+ +SS+V+ARDL  +T     + E +G+ ++K   S + G G+ G  GGY+ G   Y    GGYPGHGG       H GGGYPG
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGET-----VMETDGVEDAK-DRSYDRGHGHYG--GGYDRGHSRYG---GGYPGHGG-------HYGGGYPG

Query:  RGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN
        R   GGG  C++GCC   YHG    RCCSYAGEAVD EP+AKPHN
Subjt:  RGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN

XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]1.1e-62100Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH
        MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH

Query:  GSCGRCCSYAGEAVDVEPQAKPHN
        GSCGRCCSYAGEAVDVEPQAKPHN
Subjt:  GSCGRCCSYAGEAVDVEPQAKPHN

TrEMBL top hitse value%identityAlignment
A0A2P5CDK7 Glycine rich protein6.1e-1951.02Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDL----KGE------TVMETDGVEDAK----------DRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGY
        M SK F+LLGL  A+++L+SS+V ARDL     GE      +  E   V+DAK             Y  G G YGGGY  G   YGGGYPG  G YGGGY
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDL----KGE------TVMETDGVEDAK----------DRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGY

Query:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN
        PGRG YGG   C++GCC   Y+G  C RCCSYAGEAVD + +AKP N
Subjt:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like5.2e-63100Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH
        MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYH

Query:  GSCGRCCSYAGEAVDVEPQAKPHN
        GSCGRCCSYAGEAVDVEPQAKPHN
Subjt:  GSCGRCCSYAGEAVDVEPQAKPHN

A0A6P3ZQ03 cold and drought-regulated protein CORA-like3.0e-1850.35Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVM-----ETDGVEDAK-DRSYDRGHGHYGGGYDRGHSRYG---GGYPGHG-------GHYGGGYPGRG
        M S+  I LGLLFAVV+L+SS+V+ARDL  +T       +T+G+ +AK    Y  G+    GGY+ G   Y    GGYPGHG       GH GGGYPGR 
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVM-----ETDGVEDAK-DRSYDRGHGHYGGGYDRGHSRYG---GGYPGHG-------GHYGGGYPGRG

Query:  RYGGGRHCHHGCCG---YHGSCGRCCSYAGEAVDVEPQAKPHN
          GGG  C++GCC    Y   C +CCSYAGEA D EP+AKPHN
Subjt:  RYGGGRHCHHGCCG---YHGSCGRCCSYAGEAVDVEPQAKPHN

A0A6P4A6R6 cold and drought-regulated protein CORA-like3.0e-1851.03Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGET-----VMETDGVEDAK-DRSYDRGHGHYG--GGYDRGHSRYG---GGYPGHGG-------HYGGGYPG
        M S+  I LGL+FAVV+ +SS+V+ARDL  +T     + E +G+ ++K   S + G G+ G  GGY+ G   Y    GGYPGHGG       H GGGYPG
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGET-----VMETDGVEDAK-DRSYDRGHGHYG--GGYDRGHSRYG---GGYPGHGG-------HYGGGYPG

Query:  RGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN
        R   GGG  C++GCC   YHG    RCCSYAGEAVD EP+AKPHN
Subjt:  RGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEPQAKPHN

V4U4R7 Uncharacterized protein4.3e-1749.65Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDL---------KGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYG----
        M SK F++LGLL ++V+L+SS+V ARDL          GE   ET+GV+DAK   Y+ G+G Y GG   G+    GGYPG G    GGYPGRG YG    
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDL---------KGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYG----

Query:  --GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVEPQAKPHN
          GG +C +GCC  GY+G   RCCSYAGEAV+ + +A+P N
Subjt:  --GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVEPQAKPHN

SwissProt top hitse value%identityAlignment
O22612 Dormancy-associated protein 23.5e-0847.37Show/hide
Query:  KAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHG-HYGGGYDRGHSRY---------GGGYPGHGGHYGGG---YPGRGRYGGGR
        KA ++LGLL A+V+L+SS+V+AR+L  E V ++D V DAK   Y RG G H GGGY  G   Y         GGGY G GG++ GG   + G G Y GG 
Subjt:  KAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHG-HYGGGYDRGHSRY---------GGGYPGHGGHYGGG---YPGRGRYGGGR

Query:  HCHHGCCGYHGSCG
          H+G  GYHG  G
Subjt:  HCHHGCCGYHGSCG

P23137 Glycine-rich protein1.9e-0943.85Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDL-KGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGG---RHCHHGC
        M SKAF+ LGL  A   L+SS+V A +L +    M+ DG E+  D     G+   GG                 G+YGG   GRGR GGG   R C +GC
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDL-KGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGG---RHCHHGC

Query:  C--GYHGSCGRCCSYAGEAVDVEPQAKPHN
        C  GY+G C RCCSYAGEA+D   +A+PHN
Subjt:  C--GYHGSCGRCCSYAGEAVDVEPQAKPHN

P37703 Glycine-rich protein DC9.11.1e-0645.27Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHY--GGGYDRGHSRY--GGGYPGHGGHY--GGGY-PGRGRY--GGGRH
        M SK F+LLGL  A  +L+SS+V AR+L  ET  +T+G  +     Y  G G Y  GGGY  G   Y  GGGY   GG Y  GGGY  G G Y  GGG H
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHY--GGGYDRGHSRY--GGGYPGHGGHY--GGGY-PGRGRY--GGGRH

Query:  ----------CHHGCCG--YHGSCGRCCSYAGEAVDVE---PQAKPHN
                   HHG  G  YH   GRCCS A EA  +E    Q KP N
Subjt:  ----------CHHGCCG--YHGSCGRCCSYAGEAVDVE---PQAKPHN

Q9SL15 Glycine-rich protein 32.7e-0843.45Show/hide
Query:  MNSKAFILLGLLFAVVVLLS-----SDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGG--YDRGHSRY---GGGYPGHGGHYGGG----YPGRGRY
        M SKA +LLG LFAV++++S     S  T      ETV            +Y+ G G+ GGG  Y  G   Y   GG Y G GG Y GG      G GRY
Subjt:  MNSKAFILLGLLFAVVVLLS-----SDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGG--YDRGHSRY---GGGYPGHGGHYGGG----YPGRGRY

Query:  --GGGR---------HCHHGCC--GYHGSCGRCCSYAGEAVDVEP
          GGGR         +C HGCC  GY+G C RCCSYAGEAV  +P
Subjt:  --GGGR---------HCHHGCC--GYHGSCGRCCSYAGEAVDVEP

Q9ZSJ6 Glycine-rich protein 3 short isoform4.9e-1046.88Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYP-GRGRY--------GGGRH
        M SK  +LLG LFA + ++S    A  +K E+       E  K   +  G G  GGG      RY GG  GHGGH GGGY  G GRY        GGG +
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYP-GRGRY--------GGGRH

Query:  CHHGCC--GYHGSCGRCCSYAGEAVDVE
        C HGCC  GYHG C RCCSYAGEAV  +
Subjt:  CHHGCC--GYHGSCGRCCSYAGEAVDVE

Arabidopsis top hitse value%identityAlignment
AT2G05380.1 glycine-rich protein 3 short isoform3.5e-1146.88Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYP-GRGRY--------GGGRH
        M SK  +LLG LFA + ++S    A  +K E+       E  K   +  G G  GGG      RY GG  GHGGH GGGY  G GRY        GGG +
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYP-GRGRY--------GGGRH

Query:  CHHGCC--GYHGSCGRCCSYAGEAVDVE
        C HGCC  GYHG C RCCSYAGEAV  +
Subjt:  CHHGCC--GYHGSCGRCCSYAGEAVDVE

AT2G05520.5 glycine-rich protein 33.9e-1044.72Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRY---GGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCC
        M SKA +LLG LFAV++++S    A        + ++  E  K     RG+G  GG Y+ G  RY   GG Y G GG  GGG        GG +C HGCC
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRY---GGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCC

Query:  --GYHGSCGRCCSYAGEAVDVEP
          GY+G C RCCSYAGEAV  +P
Subjt:  --GYHGSCGRCCSYAGEAVDVEP

AT2G05520.6 glycine-rich protein 36.6e-1045.53Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGG--YPGHGGHYGGGYPGRGRYG-GGRHCHHGCC
        M SKA +LLG LFAV++++S    A        + ++  E  K     RG+G  GG Y+ G    GGG  Y G GG Y GG   +G  G GG +C HGCC
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGG--YPGHGGHYGGGYPGRGRYG-GGRHCHHGCC

Query:  --GYHGSCGRCCSYAGEAVDVEP
          GY+G C RCCSYAGEAV  +P
Subjt:  --GYHGSCGRCCSYAGEAVDVEP

AT2G05530.1 Glycine-rich protein family4.2e-1245.24Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRH------CHH
        M SKA +L G LFAV+++++    A        ++++  E  +   Y+ GHG   GGY+      GGGY G GGH GGGY G G Y GG H      C +
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRH------CHH

Query:  GCC--GYHGSCGRCCSYAGEAVDVEP
        GCC  GYHG C RCCSYAGEAV  +P
Subjt:  GCC--GYHGSCGRCCSYAGEAVDVEP

AT2G05540.1 Glycine-rich protein family3.9e-1039.1Show/hide
Query:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRG-----------HGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGG
        M SKA + L L+  VV+L++S+V ARDL  ++  + +   D   ++   G            G YGG    G+   GGGY    G YG    G G  GGG
Subjt:  MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRG-----------HGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGG

Query:  RHCHHGCC--GYHGSCGRCCSYAGEAVDVEPQA
         +C +GCC  GY+G C RCC+YAG+AV  +PQ+
Subjt:  RHCHHGCC--GYHGSCGRCCSYAGEAVDVEPQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCAAGGCTTTCATCCTCCTCGGCCTTCTATTCGCCGTCGTCGTCCTCCTCTCCTCGGACGTCACGGCAAGAGACCTAAAAGGCGAAACCGTGATGGAGACCGA
CGGAGTAGAGGATGCCAAGGACCGGAGTTATGACCGTGGCCACGGTCATTATGGCGGAGGCTATGACAGAGGCCACAGTCGTTACGGTGGAGGCTACCCGGGACATGGCG
GCCACTATGGAGGAGGCTACCCGGGGCGTGGTCGTTATGGCGGTGGACGCCATTGCCACCACGGTTGCTGCGGTTACCACGGCAGTTGCGGGAGGTGCTGTAGCTATGCT
GGTGAGGCTGTTGATGTAGAACCCCAAGCCAAGCCTCACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCAAGGCTTTCATCCTCCTCGGCCTTCTATTCGCCGTCGTCGTCCTCCTCTCCTCGGACGTCACGGCAAGAGACCTAAAAGGCGAAACCGTGATGGAGACCGA
CGGAGTAGAGGATGCCAAGGACCGGAGTTATGACCGTGGCCACGGTCATTATGGCGGAGGCTATGACAGAGGCCACAGTCGTTACGGTGGAGGCTACCCGGGACATGGCG
GCCACTATGGAGGAGGCTACCCGGGGCGTGGTCGTTATGGCGGTGGACGCCATTGCCACCACGGTTGCTGCGGTTACCACGGCAGTTGCGGGAGGTGCTGTAGCTATGCT
GGTGAGGCTGTTGATGTAGAACCCCAAGCCAAGCCTCACAACTGA
Protein sequenceShow/hide protein sequence
MNSKAFILLGLLFAVVVLLSSDVTARDLKGETVMETDGVEDAKDRSYDRGHGHYGGGYDRGHSRYGGGYPGHGGHYGGGYPGRGRYGGGRHCHHGCCGYHGSCGRCCSYA
GEAVDVEPQAKPHN