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Moc04g03080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g03080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionrho GDP-dissociation inhibitor 1-like
Genome locationchr4:1938695..1940854
RNA-Seq ExpressionMoc04g03080
SyntenyMoc04g03080
Gene Ontology termsGO:0007266 - Rho protein signal transduction (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005094 - Rho GDP-dissociation inhibitor activity (molecular function)
InterPro domainsIPR000406 - Rho protein GDP-dissociation inhibitor
IPR014756 - Immunoglobulin E-set
IPR024792 - Rho GDP-dissociation inhibitor domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589120.1 Rho GDP-dissociation inhibitor 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4662.65Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL
        K +DDESLRRWKEQLLG+VDLEN+ ET+EPDVKILSLS+VS ERPDLVLPIPDDGNPKGL                            T T++ K   K+
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL

Query:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
           K  L    PQ+E+YTH+MPE+TTPSGMFARGSYSARSKF++DDNKCYLEINYT DIRK+W AT
Subjt:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

XP_004144533.1 rho GDP-dissociation inhibitor 1 [Cucumis sativus]1.9e-4864.85Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLGAVDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLE YTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

XP_008455513.1 PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo]5.5e-4864.24Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLG VDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLE YTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

XP_023529782.1 rho GDP-dissociation inhibitor 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-4662.05Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL
        K +DDESLRRWKEQLLG+VDLEN+ ET+EPDVKILSLS+VS ERPDLVLPIPDDGNPKGL                            T T++ K   K+
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL

Query:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
           K  L    PQ+E+YTH+MPE+TTPSGMFARGSY+ARSKF++DDNKCYLEINYT DIRK+W AT
Subjt:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

XP_038886942.1 rho GDP-dissociation inhibitor 1-like [Benincasa hispida]6.5e-4965.45Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLGAVDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLEAYTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

TrEMBL top hitse value%identityAlignment
A0A0A0K6K3 Uncharacterized protein9.1e-4964.85Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLGAVDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLE YTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

A0A1S3C0N1 rho GDP-dissociation inhibitor 1-like2.7e-4864.24Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLG VDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLE YTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

A0A5D3BSV8 Rho GDP-dissociation inhibitor 1-like2.7e-4864.24Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQLLG VDLEN+ ET+EP+VKILSLS+VS ERPDLVLPIP+DGNPKGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQLE YTH+MPEDTTPSGMFARGSYSARSKFL+DDNKCYLEINYT DIRKDWAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

A0A6J1ERZ8 rho GDP-dissociation inhibitor 1-like4.2e-4662.05Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL
        K +DDESLRRWKEQLLG+VDLEN+ ET+EPDVKILSLS+VS ERPDLVLPIPDDGNPKGL                            T T++ K   K+
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL

Query:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
           K  L    PQ+E+YTH+M E+TTPSGMFARGSYSARSKF++DDNKCYLEINYT DIRK+W AT
Subjt:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

A0A6J1HZE3 rho GDP-dissociation inhibitor 1-like isoform X24.2e-4661.82Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT
        K +DDESLRRWKEQL+G VDLEN+ ETVEP+VKILSLS+V+ ERPDLVLPIP+DGN KGL      G   S                          K+ 
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGKLVS--------------------------KLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT
          K  L    PQ+EAYTH+MPEDTTPSGMFARGSYSARSKF++DDNKCYLEINYT DIRK+WAAT
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT

SwissProt top hitse value%identityAlignment
P19803 Rho GDP-dissociation inhibitor 12.9e-0728.22Show/hide
Query:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--
        +DDESLR++KE LLG V +  SA+   P+V +  L+LV    P   L +   G+ +     +   K                +VS +   +      V  
Subjt:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--

Query:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
                   P+ E Y  + P +  P GM ARGSY+ +S+F +DD   +L   +   I+K+W
Subjt:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

P52565 Rho GDP-dissociation inhibitor 12.6e-0829.45Show/hide
Query:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--
        +DDESLR++KE LLG V +  SA+   P+V +  L+LV    P   L +   G+ +     +   K                +VS +   +      V  
Subjt:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--

Query:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
                   P+ E Y  + P +  P GM ARGSYS +S+F +DD   +L   +   I+KDW
Subjt:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

Q4R4J0 Rho GDP-dissociation inhibitor 12.6e-0829.45Show/hide
Query:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--
        +DDESLR++KE LLG V +  SA+   P+V +  L+LV    P   L +   G+ +     +   K                +VS +   +      V  
Subjt:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGLCTPTLFGK----------------LVSKLTPPKRCLELSV--

Query:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
                   P+ E Y  + P +  P GM ARGSYS +S+F +DD   +L   +   I+KDW
Subjt:  -----------PQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

Q95UQ1 Putative rho GDP-dissociation inhibitor 12.2e-0730Show/hide
Query:  LKFQD--DESLRRWKEQLLGA------------------VDLENSAETVEP-DVKILSLSLVSQE---------RPDLVLPIPDDGNPKGLCTPTLFGKL
        LK QD  DE+L+R+KE LLG                   + +E   +T+ P D K L   + ++          +  L   I  D       T T++ K 
Subjt:  LKFQD--DESLRRWKEQLLGA------------------VDLENSAETVEP-DVKILSLSLVSQE---------RPDLVLPIPDDGNPKGLCTPTLFGKL

Query:  VSKLTPPKRCLELSVPQLEAYTHIMPE---DTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
        + K++  K  L    PQ  A++   P    +  PSGM ARGSY+A+  F +DDN+ +L + Y   I+ DW
Subjt:  VSKLTPPKRCLELSVPQLEAYTHIMPE---DTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

Q9SFC6 Rho GDP-dissociation inhibitor 15.7e-4052.12Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL
        K +DDESLR+WKEQLLG+VD+ N  ET++P+V+I SL+++S  RPD+VL +P++GNPKG+                            T T++ K   K+
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL

Query:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAA
           K  L    PQLE Y H+MPE+TTPSGMFARGSYSAR+KFL+DDNKCYLEINY+ DIRK+W A
Subjt:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAA

Arabidopsis top hitse value%identityAlignment
AT1G12070.1 Immunoglobulin E-set superfamily protein2.4e-3346.95Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNP----------------------------KGLCTPTLFGKLVSK
        K +DDESLRRWKEQLLG+VDLE   ET +P VKIL+L++ S +R D+VL IP++G P                             GL       K   K
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNP----------------------------KGLCTPTLFGKLVSK

Query:  LTPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
        +   K  L    PQ E YTH+M E+T PSG+  RGSYS +SKF++DDN+CYLE NYT DIRK+W
Subjt:  LTPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

AT1G62450.1 Immunoglobulin E-set superfamily protein3.6e-3751.85Show/hide
Query:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDG--NPK--------------------------GLCTPTLFGKLVSKLT
        +DDESLRRWKEQLLG VDLE+  ET +P VKIL L++ S +R ++VL IP+DG  NPK                          GL       K   K+ 
Subjt:  QDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDG--NPK--------------------------GLCTPTLFGKLVSKLT

Query:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW
          K  L    PQ E+Y H+MPE+ TPSGMFARGSYSAR+KF++DDNKCYLEINYT DIRK W
Subjt:  PPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDW

AT3G07880.1 Immunoglobulin E-set superfamily protein4.1e-4152.12Show/hide
Query:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL
        K +DDESLR+WKEQLLG+VD+ N  ET++P+V+I SL+++S  RPD+VL +P++GNPKG+                            T T++ K   K+
Subjt:  KFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDLVLPIPDDGNPKGL---------------------------CTPTLFGKLVSKL

Query:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAA
           K  L    PQLE Y H+MPE+TTPSGMFARGSYSAR+KFL+DDNKCYLEINY+ DIRK+W A
Subjt:  TPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCGTTTGCCGATTTCGGATCACCACACAACTTTTTCTCCCTCTTTTTCCAGTCTTCGAAACCCGAAACCAGAGCTAAATTCTCTTCTGGGGTTTCTTACTACGG
AAATGTTGATAATTTAGAGCTTCCTTATGTTCTGATTCATGGGGCGTGGTCGATTTTTCTTTGTTTTGGTGTAACCCTTAAATTTCAAGATGATGAGAGTCTGAGGAGGT
GGAAAGAGCAGCTTCTTGGGGCTGTGGATTTAGAAAATTCTGCAGAAACTGTTGAGCCAGATGTGAAGATTCTTAGTTTGTCATTAGTGTCCCAAGAGAGACCGGACTTG
GTTCTTCCAATTCCCGACGACGGTAATCCGAAAGGGTTGTGTACACCAACACTGTTTGGAAAACTGGTGTCAAAGTTGACACCTCCAAAGAGATGCTTGGAACTTTCAGT
CCCCCAGCTAGAGGCCTACACTCATATAATGCCTGAGGACACCACGCCCTCCGGCATGTTCGCTCGTGGATCATATTCAGCAAGATCTAAGTTTCTTAATGATGATAACA
AGTGTTACTTGGAAATTAACTACACATCTGATATCAGAAAGGACTGGGCTGCAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCGTTTGCCGATTTCGGATCACCACACAACTTTTTCTCCCTCTTTTTCCAGTCTTCGAAACCCGAAACCAGAGCTAAATTCTCTTCTGGGGTTTCTTACTACGG
AAATGTTGATAATTTAGAGCTTCCTTATGTTCTGATTCATGGGGCGTGGTCGATTTTTCTTTGTTTTGGTGTAACCCTTAAATTTCAAGATGATGAGAGTCTGAGGAGGT
GGAAAGAGCAGCTTCTTGGGGCTGTGGATTTAGAAAATTCTGCAGAAACTGTTGAGCCAGATGTGAAGATTCTTAGTTTGTCATTAGTGTCCCAAGAGAGACCGGACTTG
GTTCTTCCAATTCCCGACGACGGTAATCCGAAAGGGTTGTGTACACCAACACTGTTTGGAAAACTGGTGTCAAAGTTGACACCTCCAAAGAGATGCTTGGAACTTTCAGT
CCCCCAGCTAGAGGCCTACACTCATATAATGCCTGAGGACACCACGCCCTCCGGCATGTTCGCTCGTGGATCATATTCAGCAAGATCTAAGTTTCTTAATGATGATAACA
AGTGTTACTTGGAAATTAACTACACATCTGATATCAGAAAGGACTGGGCTGCAACATAA
Protein sequenceShow/hide protein sequence
MLPFADFGSPHNFFSLFFQSSKPETRAKFSSGVSYYGNVDNLELPYVLIHGAWSIFLCFGVTLKFQDDESLRRWKEQLLGAVDLENSAETVEPDVKILSLSLVSQERPDL
VLPIPDDGNPKGLCTPTLFGKLVSKLTPPKRCLELSVPQLEAYTHIMPEDTTPSGMFARGSYSARSKFLNDDNKCYLEINYTSDIRKDWAAT