; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g03710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g03710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type domain-containing protein
Genome locationchr4:2338578..2338964
RNA-Seq ExpressionMoc04g03710
SyntenyMoc04g03710
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4291060.1 unnamed protein product [Prunus armeniaca]1.3e-2346.21Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG------EMEEEICSVCLVEFVGEDSVSQL
        MI L + +  +SMA I F+TC  IPL +++ A+  ++G +   T +    +   C   LPV RF++LQ  G      E  EE CS+CLVEF  ED VSQL
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG------EMEEEICSVCLVEFVGEDSVSQL

Query:  HKCGHRFHLECIENWLHRDHFTCPLCRSFLFT
         KCGH FH++CIE W+ R HFTCP+CRS  F+
Subjt:  HKCGHRFHLECIENWLHRDHFTCPLCRSFLFT

KAG4984696.1 hypothetical protein JHK87_029445 [Glycine soja]5.1e-2351.33Show/hide
Query:  IVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG--EMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRD
        IVF+TC+LIPL +L+ A+ +M+            M+ P   + LPV RFE+L+     E +EEICS+CLVE+ GED+VS+L +CGH FHL CIE W+ R+
Subjt:  IVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG--EMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRD

Query:  HFTCPLCRSFLFT
         F+CPLCRSFLF+
Subjt:  HFTCPLCRSFLFT

TKY50666.1 RING-H2 finger protein ATL18 [Spatholobus suberectus]3.0e-2347.06Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIG-ILLGRTYQPLTMDVP---PCEAKLPVFRFEELQHR----GE--MEEEICSVCLVEFVGEDS
        MISL + R  + +  IVF+TC+LIP  +L+ A+ +M G +++  +Y+   M      P    LPV R+E+L+      GE    +EICS+CLVE+ GED+
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIG-ILLGRTYQPLTMDVP---PCEAKLPVFRFEELQHR----GE--MEEEICSVCLVEFVGEDS

Query:  VSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT
        VS+L +CGH FHL CIE W+HR+ F+CPLCRSFLF+
Subjt:  VSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT

VVA26628.1 PREDICTED: AP-1 complex subunit [Prunus dulcis]1.3e-2346.27Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQ-PLTMDVPPC-EAKLPVFRFEELQHRGEME------EEICSVCLVEFVGEDSVS
        MI L + +  +SMA I F+TC  IPL +++ A+  ++G +   T Q     D   C +  LPV RF++LQ  G +       EE CS+CLVEF  ED VS
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQ-PLTMDVPPC-EAKLPVFRFEELQHRGEME------EEICSVCLVEFVGEDSVS

Query:  QLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT
        QL KCGH FH++CIE W+ R HFTCP+CRS  F+
Subjt:  QLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT

XP_022762435.1 RING-H2 finger protein ATL18-like [Durio zibethinus]1.2e-2447.83Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAK---LPVFRFEELQ--------HRGEMEEEICSVCLVEFVGED
        MISL      +S A ++F+TCV IP  +L+ A+  ++G +      P       C+     LPV RFE+L+          GE  EE+CS+CLVEF  ED
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAK---LPVFRFEELQ--------HRGEMEEEICSVCLVEFVGED

Query:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS
         VSQLHKCGH FH+ CIE WL RD FTCPLCRSFLF +
Subjt:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS

TrEMBL top hitse value%identityAlignment
A0A0A0K513 RING-type domain-containing protein4.3e-3664.06Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHR
        MI +AL RG +SMA IVF TCV IPL +L+ AI +M  IL GRT Q LT    PCE KL V RFEELQ     EEEICSVCL EF  E  VSQLH+C H 
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHR

Query:  FHLECIENWLHRDHFTCPLCRSFLFTSL
        FHLECIE+WL R+ FTCPLCRSF+F  L
Subjt:  FHLECIENWLHRDHFTCPLCRSFLFTSL

A0A445IUE5 RING-H2 finger protein ATL18 (Fragment)2.5e-2351.33Show/hide
Query:  IVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG--EMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRD
        IVF+TC+LIPL +L+ A+ +M+            M+ P   + LPV RFE+L+     E +EEICS+CLVE+ GED+VS+L +CGH FHL CIE W+ R+
Subjt:  IVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG--EMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRD

Query:  HFTCPLCRSFLFT
         F+CPLCRSFLF+
Subjt:  HFTCPLCRSFLFT

A0A5E4FLS0 PREDICTED: AP-1 complex subunit6.5e-2446.27Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQ-PLTMDVPPC-EAKLPVFRFEELQHRGEME------EEICSVCLVEFVGEDSVS
        MI L + +  +SMA I F+TC  IPL +++ A+  ++G +   T Q     D   C +  LPV RF++LQ  G +       EE CS+CLVEF  ED VS
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQ-PLTMDVPPC-EAKLPVFRFEELQHRGEME------EEICSVCLVEFVGEDSVS

Query:  QLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT
        QL KCGH FH++CIE W+ R HFTCP+CRS  F+
Subjt:  QLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFT

A0A6J5VPD4 RING-type domain-containing protein6.5e-2446.21Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG------EMEEEICSVCLVEFVGEDSVSQL
        MI L + +  +SMA I F+TC  IPL +++ A+  ++G +   T +    +   C   LPV RF++LQ  G      E  EE CS+CLVEF  ED VSQL
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRG------EMEEEICSVCLVEFVGEDSVSQL

Query:  HKCGHRFHLECIENWLHRDHFTCPLCRSFLFT
         KCGH FH++CIE W+ R HFTCP+CRS  F+
Subjt:  HKCGHRFHLECIENWLHRDHFTCPLCRSFLFT

A0A6P6AC29 RING-H2 finger protein ATL18-like5.8e-2547.83Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAK---LPVFRFEELQ--------HRGEMEEEICSVCLVEFVGED
        MISL      +S A ++F+TCV IP  +L+ A+  ++G +      P       C+     LPV RFE+L+          GE  EE+CS+CLVEF  ED
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAK---LPVFRFEELQ--------HRGEMEEEICSVCLVEFVGED

Query:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS
         VSQLHKCGH FH+ CIE WL RD FTCPLCRSFLF +
Subjt:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL646.0e-1147.69Show/hide
Query:  KLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS
        K+P+F +         E+E CSVCL EF  ED    L KCGH FH++CI+ W  R   TCPLCR+
Subjt:  KLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS

Q9LZJ6 RING-H2 finger protein ATL51.3e-1044.29Show/hide
Query:  PPCEAKLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS
        P    K+P+F +    H   +EE  CSVCL EF  +D    L KCGH FH++CI+ W  R   +CPLCR+
Subjt:  PPCEAKLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS

Q9SRQ8 RING-H2 finger protein ATL511.0e-1043.48Show/hide
Query:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS
        + V+++ ++   G +E   CSVCL EF   +S+  L KC H FH+ CI+ WL + H  CPLCR+F+ TS
Subjt:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS

Q9SZL4 RING-H2 finger protein ATL181.0e-1840.74Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIG----------NMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEI-CSVCLVEFVGED
        MIS+   R P+  A IVF+TCV IPL RL+   G          N++G++ G                             E EEEI C +CLVEF  ED
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIG----------NMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEI-CSVCLVEFVGED

Query:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFL
        +V+ L +C H FH+ CIE WL R H TCPLCRSF+
Subjt:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFL

Q9XF92 Brassinosteroid-responsive RING protein 12.9e-1350Show/hide
Query:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS
        LPV +FEEL + GE   E C+VCL EF GE  +  L  C H FH  C++ W+  D  TCPLCR+
Subjt:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein7.3e-1232.73Show/hide
Query:  LIPLRRLQTAIGNMIGILLGRTYQPLTMDVPP----CEAKLPVFRFEELQHRGEMEEE----ICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDH
        ++ +  L+  + ++  I+   T   + +D  P       ++ + +F+ L    E EEE     C VCL  F  E+ VS+L  C H FH  C++NW   +H
Subjt:  LIPLRRLQTAIGNMIGILLGRTYQPLTMDVPP----CEAKLPVFRFEELQHRGEMEEE----ICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDH

Query:  FTCPLCRSFL
         TCPLCRS L
Subjt:  FTCPLCRSFL

AT2G47560.1 RING/U-box superfamily protein4.3e-1247.69Show/hide
Query:  KLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS
        K+P+F +         E+E CSVCL EF  ED    L KCGH FH++CI+ W  R   TCPLCR+
Subjt:  KLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS

AT3G03550.1 RING/U-box superfamily protein7.3e-1243.48Show/hide
Query:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS
        + V+++ ++   G +E   CSVCL EF   +S+  L KC H FH+ CI+ WL + H  CPLCR+F+ TS
Subjt:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFLFTS

AT3G61460.1 brassinosteroid-responsive RING-H22.1e-1450Show/hide
Query:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS
        LPV +FEEL + GE   E C+VCL EF GE  +  L  C H FH  C++ W+  D  TCPLCR+
Subjt:  LPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWLHRDHFTCPLCRS

AT4G38140.1 RING/U-box superfamily protein7.3e-2040.74Show/hide
Query:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIG----------NMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEI-CSVCLVEFVGED
        MIS+   R P+  A IVF+TCV IPL RL+   G          N++G++ G                             E EEEI C +CLVEF  ED
Subjt:  MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIG----------NMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEI-CSVCLVEFVGED

Query:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFL
        +V+ L +C H FH+ CIE WL R H TCPLCRSF+
Subjt:  SVSQLHKCGHRFHLECIENWLHRDHFTCPLCRSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCTTGGCGCTCGGTCGGGGTCCGGTGAGCATGGCTGTCATTGTCTTCTTCACTTGTGTATTAATCCCTCTGCGTCGACTGCAGACAGCGATCGGGAACATGAT
TGGCATTCTGTTGGGCAGGACGTATCAACCGCTTACAATGGATGTGCCACCGTGCGAGGCAAAGCTCCCCGTTTTCAGGTTCGAAGAGCTGCAGCACAGGGGCGAAATGG
AGGAGGAGATTTGCTCGGTTTGCCTGGTCGAGTTCGTCGGAGAAGATTCTGTGAGCCAGTTGCATAAATGTGGCCATCGTTTCCATCTTGAATGTATTGAAAATTGGCTC
CATAGAGATCACTTCACCTGCCCTCTCTGCAGATCCTTCCTCTTCACTTCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGCTTGGCGCTCGGTCGGGGTCCGGTGAGCATGGCTGTCATTGTCTTCTTCACTTGTGTATTAATCCCTCTGCGTCGACTGCAGACAGCGATCGGGAACATGAT
TGGCATTCTGTTGGGCAGGACGTATCAACCGCTTACAATGGATGTGCCACCGTGCGAGGCAAAGCTCCCCGTTTTCAGGTTCGAAGAGCTGCAGCACAGGGGCGAAATGG
AGGAGGAGATTTGCTCGGTTTGCCTGGTCGAGTTCGTCGGAGAAGATTCTGTGAGCCAGTTGCATAAATGTGGCCATCGTTTCCATCTTGAATGTATTGAAAATTGGCTC
CATAGAGATCACTTCACCTGCCCTCTCTGCAGATCCTTCCTCTTCACTTCACTGTAA
Protein sequenceShow/hide protein sequence
MISLALGRGPVSMAVIVFFTCVLIPLRRLQTAIGNMIGILLGRTYQPLTMDVPPCEAKLPVFRFEELQHRGEMEEEICSVCLVEFVGEDSVSQLHKCGHRFHLECIENWL
HRDHFTCPLCRSFLFTSL