; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g03880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g03880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr4:2459205..2459951
RNA-Seq ExpressionMoc04g03880
SyntenyMoc04g03880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059605.1 hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa]4.7e-6176.69Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--
        MT +P R FLPT PLNDALP+S PD  S QTLRRRLSSISFKI PISSP+TSW  FRRSKSVSSMR+++ +SLRKWWDWGWSWILSRK+ FA+DLE+N  
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--

Query:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
          D+ETK+LGSN  CRGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

KAG7022775.1 hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-7286.84Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MT +PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

XP_022135907.1 uncharacterized protein LOC111007745 [Momordica charantia]7.4e-8398.68Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
        SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

XP_022928235.1 uncharacterized protein LOC111435129 [Cucurbita moschata]4.1e-7381.5Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MT +PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQIKVSEKKLPIPAMEDSGKRFG
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGIQ  V    L      DSGK  G
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQIKVSEKKLPIPAMEDSGKRFG

XP_038888269.1 uncharacterized protein LOC120078122 [Benincasa hispida]6.9e-7386.84Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        M  +PRRSFLPTRPLNDALPVS PDS QT+RRRLSSISFKIQPISSPV SWPFRRSKSVSSMR+++GSSLRKWWDWGWSWILSRKA F +DLE+ND+ETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
        +LGSNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

TrEMBL top hitse value%identityAlignment
A0A0A0K1L8 Uncharacterized protein1.4e-5873.62Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDE
        MT +P R FLPT PLNDALP+S P   S QTLRRRLSSISFKI PISSP+TSW F RSKS+SSMR+++ +SLRKWWDWGWSWILSRKA FA+DLE+ND++
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDE

Query:  -----TKSLGS--NCRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
             TK+LGS  + RGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  -----TKSLGS--NCRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

A0A2I4FBL9 uncharacterized protein LOC1089972846.4e-5673.29Show/hide
Query:  RSFLPTRPLNDALPVSHPDS-DQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSN
        RSF+P  P   ALPVS  DS +Q LRRRLSS+S KIQPI+SP TSW FRRSKSVSSM EY+GSS+R+WWDWGWSWILSRK  FAKDLE+N++E K LGS+
Subjt:  RSFLPTRPLNDALPVSHPDS-DQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSN

Query:  CRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGI
         +GSWRH+FYKVRSE RKL+ SD VGLPQT++YDS NYS+NFDDGI
Subjt:  CRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGI

A0A5A7V189 Uncharacterized protein2.3e-6176.69Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--
        MT +P R FLPT PLNDALP+S PD  S QTLRRRLSSISFKI PISSP+TSW  FRRSKSVSSMR+++ +SLRKWWDWGWSWILSRK+ FA+DLE+N  
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--

Query:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
          D+ETK+LGSN  CRGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

A0A6J1C433 uncharacterized protein LOC1110077453.6e-8398.68Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ
        SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDG++
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQ

A0A6J1ER56 uncharacterized protein LOC1114351292.0e-7381.5Show/hide
Query:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MT +PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQIKVSEKKLPIPAMEDSGKRFG
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGIQ  V    L      DSGK  G
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQIKVSEKKLPIPAMEDSGKRFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17300.1 unknown protein2.8e-2448Show/hide
Query:  ALPVSHPDSDQ--TLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAP-FAKDLEINDDETK-SLGSNCRGSWRHL
        +LP+S   +D+   LRRRLSS+S  +        S    RSKSVS M E  GSS+++WW+W WSWIL +K P F  DLE+N +ETK SLG+  RGS+ H+
Subjt:  ALPVSHPDSDQ--TLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAP-FAKDLEINDDETK-SLGSNCRGSWRHL

Query:  FYKVRSEFRKLMRSDRVGLPQTFKY
        F+K+RSE R+L+R     LP + K+
Subjt:  FYKVRSEFRKLMRSDRVGLPQTFKY

AT4G35320.1 unknown protein6.8e-2650.43Show/hide
Query:  DSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSWRHLFYKVRSEFRKL
        D    +RRRLSS+S  +    + + +  F RSKSVS+M E +GSS+++WW+WGWSWILSRK  F +DLE+N DE KS+GS  RGS  H+F+K+RS+ R  
Subjt:  DSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSWRHLFYKVRSEFRKL

Query:  M-RSDRVGLPQTFKY
        M  S    LP + KY
Subjt:  M-RSDRVGLPQTFKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCGTTCCGCGGCGGAGCTTTCTTCCGACGCGGCCTCTCAACGACGCGCTCCCCGTCTCGCATCCAGATTCCGATCAAACGCTACGCCGAAGGCTCTCTTCGAT
TTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTCACTTCCTGGCCGTTTCGTAGATCCAAATCGGTGTCCTCCATGCGCGAATACTCCGGCAGTTCGCTGAGGAAGTGGT
GGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTCCCTTCGCCAAAGATCTGGAGATTAACGACGATGAAACCAAATCTCTTGGATCTAATTGCAGAGGTAGTTGG
CGGCATCTTTTCTATAAGGTTAGGTCTGAGTTCCGGAAGCTTATGCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAGTACGATTCCGTCAATTACTCGAAGAATTT
CGACGACGGAATTCAGATCAAGGTTAGTGAAAAAAAGCTTCCGATTCCGGCAATGGAGGACTCTGGTAAACGATTTGGAAAATCAACCTGCTTCGAAATGCTCATTTCTT
CGTTCTTCGATCGATCGGAACTCAGAACACATTTAATTTGTTTGCTCGCCGGCCCTGAGGTGGAGAAGAACAGAGAAATTGCAGAGATCTTCGTCGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCGTTCCGCGGCGGAGCTTTCTTCCGACGCGGCCTCTCAACGACGCGCTCCCCGTCTCGCATCCAGATTCCGATCAAACGCTACGCCGAAGGCTCTCTTCGAT
TTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTCACTTCCTGGCCGTTTCGTAGATCCAAATCGGTGTCCTCCATGCGCGAATACTCCGGCAGTTCGCTGAGGAAGTGGT
GGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTCCCTTCGCCAAAGATCTGGAGATTAACGACGATGAAACCAAATCTCTTGGATCTAATTGCAGAGGTAGTTGG
CGGCATCTTTTCTATAAGGTTAGGTCTGAGTTCCGGAAGCTTATGCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAGTACGATTCCGTCAATTACTCGAAGAATTT
CGACGACGGAATTCAGATCAAGGTTAGTGAAAAAAAGCTTCCGATTCCGGCAATGGAGGACTCTGGTAAACGATTTGGAAAATCAACCTGCTTCGAAATGCTCATTTCTT
CGTTCTTCGATCGATCGGAACTCAGAACACATTTAATTTGTTTGCTCGCCGGCCCTGAGGTGGAGAAGAACAGAGAAATTGCAGAGATCTTCGTCGGAAATTAA
Protein sequenceShow/hide protein sequence
MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSW
RHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGIQIKVSEKKLPIPAMEDSGKRFGKSTCFEMLISSFFDRSELRTHLICLLAGPEVEKNREIAEIFVGN