CuGenDBv2

Gene ID	Moc04g03960
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	chr4:2493735..2496435
RNA-Seq Expression	Moc04g03960
Synteny	Moc04g03960
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

2.3e-91

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F+NAS IIGRLQ+LQD KN+GSLSG+DGIV+ALLAKQMESLQL+FSSI+KTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPS+EDCLNGLMLLC MHR+EY+LKES+VSALP+LFWKA NH AQDLSSL QLL+DQPNI+KEEVEFVFDTILV+EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

XP_022136277.1 uncharacterized protein At5g43822 isoform X1 [Momordica charantia]

1.4e-104

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

XP_022136278.1 uncharacterized protein At5g43822 isoform X2 [Momordica charantia]

2.6e-98

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV

XP_022136279.1 uncharacterized protein At5g43822 isoform X3 [Momordica charantia]

7.2e-101

98.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA   SAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

2.3e-91

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F NAS IIGRLQ+LQD  NYGSLSG+DGIVDALLAKQMESLQL FSSI KTMEELGN+VRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQL+KGGSNQPS KQLQQRVGLKPS+EDCLNGL LLCDMHR+EYHLKES+VSALP+LFWK  NHSAQDLSSLQQLL+DQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

1.1e-91

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F+NAS IIGRLQ+LQD KN+GSLSG+DGIV+ALLAKQMESLQL+FSSI+KTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPS+EDCLNGLMLLC MHR+EY+LKES+VSALP+LFWKA NH AQDLSSL QLL+DQPNI+KEEVEFVFDTILV+EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

A0A6J1C3W3 uncharacterized protein At5g43822 isoform X3

3.5e-101

98.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA   SAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

A0A6J1C552 uncharacterized protein At5g43822 isoform X1

6.8e-105

100

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

A0A6J1C781 uncharacterized protein At5g43822 isoform X2

1.2e-98

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV
        GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEV

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

1.1e-91

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F NAS IIGRLQ+LQD  NYGSLSG+DGIVDALLAKQMESLQL FSSI KTMEELGN+VRSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA
        GKQL+KGGSNQPS KQLQQRVGLKPS+EDCLNGL LLCDMHR+EYHLKES+VSALP+LFWK  NHSAQDLSSLQQLL+DQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

5.5e-43

47.24

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQV  +SLFRNAS II RLQ +Q+  +YG+L  + GI DA++ +QM  L+    S++  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVE
        G QL +  S++   +++++R+G+KP I DCL GL +L DMH++EYHLK S++S L  L  K    S  DL++LQ L++DQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

3.9e-44

47.24

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQV  +SLFRNAS II RLQ +Q+  +YG+L  + GI DA++ +QM  L+    S++  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVE
        G QL +  S++   +++++R+G+KP I DCL GL +L DMH++EYHLK S++S L  L  K    S  DL++LQ L++DQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVE

Sequences

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CDS sequence

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ATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGAAAGTTTAAGGACGAAATGGATCGCTGGGACGAGCTCCAAGTTTGCTTAATTTCGCTGTTCAGAAAC
GCTTCCTTCATCATCGGGAGGTTGCAGATGCTTCAAGACTCTAAGAATTATGGCAGTCTGTCCGGCATAGATGGCATTGTAGACGCGCTATTGGCGAAGCAGATG
GAATCCTTGCAACTTAATTTCTCGTCTATTGAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGATCGATGGAGAAGATTTATCGTGATGGGAAGCAATTAGTC
AAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAGCAAAGAGTTGGTTTAAAACCCAGTATTGAAGATTGCTTGAATGGGTTAATGCTTCTATGCGACATG
CACCGCACTGAGTACCATCTTAAAGAATCTGTGGTCTCAGCACTTCCCAAACTTTTCTGGAAAGCCAGTAATCACAGTGCCCAAGATCTCAGTTCCTTGCAGCAA
CTTTTGATAGATCAGCCTAACATCCAGAAAGAGGAAGTTGAATTCGTCTTTGATACCATACTGGTCGTGGAAGCCTAG

mRNA sequence

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Protein sequence

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MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLV
KGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

Moc04g03960 (gene) of Bitter gourd (OHB3-1) v2 genome