; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g05720 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g05720
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr4:3891913..3894155
RNA-Seq ExpressionMoc04g05720
SyntenyMoc04g05720
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]2.7e-10284.23Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLA FSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK IE ADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSD WELKRQ+E+LIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]4.1e-9880.91Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAP+TF EVLQK KKVIDG 
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKI RG+SGK IEK DPKSKDKGSFSSGR EYR+AENGPTRSRPYERFTPTTIPI EILT IEESGMEKLLKRPEKL+   ERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSDCWELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

XP_022149419.1 uncharacterized protein LOC111017849 [Momordica charantia]1.1e-10384.65Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQF SRHYDKKTATHLATI+QKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK IEKADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTP TIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREHDHNTSDCWELKRQ+EDLIQDGYFKKFVGKP T S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

XP_022150613.1 uncharacterized protein LOC111018708, partial [Momordica charantia]1.3e-9981.33Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSR Y KKT THLATIRQKEG TLREYVTRFQEEQLK                       VKLGE+AP TFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RP+RKIGRG+SGK +E+ADPKSKDKGSFSSGRAEYR+AE+GPT+SRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSDCWELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]5.5e-10384.23Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK +E+ADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTPTTIPI EILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSD WELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088131.3e-10284.23Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLA FSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK IE ADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSD WELKRQ+E+LIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

A0A6J1CKB3 uncharacterized protein LOC1110120812.0e-9880.91Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAP+TF EVLQK KKVIDG 
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKI RG+SGK IEK DPKSKDKGSFSSGR EYR+AENGPTRSRPYERFTPTTIPI EILT IEESGMEKLLKRPEKL+   ERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSDCWELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

A0A6J1D701 uncharacterized protein LOC1110178495.4e-10484.65Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQF SRHYDKKTATHLATI+QKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK IEKADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTP TIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREHDHNTSDCWELKRQ+EDLIQDGYFKKFVGKP T S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

A0A6J1D9W7 uncharacterized protein LOC1110187086.2e-10081.33Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSR Y KKT THLATIRQKEG TLREYVTRFQEEQLK                       VKLGE+AP TFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RP+RKIGRG+SGK +E+ADPKSKDKGSFSSGRAEYR+AE+GPT+SRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSDCWELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

A0A6J1DS95 uncharacterized protein LOC1110234212.7e-10384.23Show/hide
Query:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ
        +S YSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK                       VKLGEEAPATFAEVLQKAKKVIDGQ
Subjt:  MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLK-----------------------VKLGEEAPATFAEVLQKAKKVIDGQ

Query:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY
        ELLRTKT RPERKIGRG+SGK +E+ADPKSKDKGSFSSGRAEYR+AENGPTRSRPYERFTPTTIPI EILTNIEESGMEKLLKRPEKL+GAPERR+KDKY
Subjt:  ELLRTKTDRPERKIGRGKSGKYIEKADPKSKDKGSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKY

Query:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS
        CRFHREH HNTSD WELKRQ+EDLIQDGYFKKFVGKPRT S
Subjt:  CRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGA
GACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAGCAATTGAAGGTGAAACTTGGAGAGGAGGCCCCGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCA
TCGATGGACAGGAGCTCCTCCGAACCAAAACCGACCGACCAGAACGAAAGATCGGCCGGGGCAAAAGTGGAAAATATATAGAAAAGGCAGATCCCAAGTCCAAGGACAAG
GGATCCTTTTCCAGCGGCCGAGCTGAGTATCGAAAGGCGGAGAACGGACCTACCAGGAGCCGACCTTACGAACGCTTCACCCCGACCACGATTCCAATTTCCGAGATCCT
AACGAACATCGAGGAGTCTGGAATGGAAAAACTACTCAAGCGTCCTGAGAAGCTTCAGGGAGCCCCGGAGAGGCGCAACAAGGACAAGTATTGCCGCTTCCATCGGGAGC
ACGACCATAACACGTCGGACTGCTGGGAGTTGAAGCGCCAAGTTGAGGATCTTATTCAAGATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGGTCGGTCCCC
GTCGAGATCTTAGATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCGCTCCAGAGTCTTCATGGATGGACCCGATTGCAGACTTCATTAGGGGCAATTCACC
ACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGAAGGGGCCGTTTGAGGTCAAGGGCATAGTCCGACCTGGGA
CGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACACATGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGA
GACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAGCAATTGAAGGTGAAACTTGGAGAGGAGGCCCCGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCA
TCGATGGACAGGAGCTCCTCCGAACCAAAACCGACCGACCAGAACGAAAGATCGGCCGGGGCAAAAGTGGAAAATATATAGAAAAGGCAGATCCCAAGTCCAAGGACAAG
GGATCCTTTTCCAGCGGCCGAGCTGAGTATCGAAAGGCGGAGAACGGACCTACCAGGAGCCGACCTTACGAACGCTTCACCCCGACCACGATTCCAATTTCCGAGATCCT
AACGAACATCGAGGAGTCTGGAATGGAAAAACTACTCAAGCGTCCTGAGAAGCTTCAGGGAGCCCCGGAGAGGCGCAACAAGGACAAGTATTGCCGCTTCCATCGGGAGC
ACGACCATAACACGTCGGACTGCTGGGAGTTGAAGCGCCAAGTTGAGGATCTTATTCAAGATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGGTCGGTCCCC
GTCGAGATCTTAGATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCGCTCCAGAGTCTTCATGGATGGACCCGATTGCAGACTTCATTAGGGGCAATTCACC
ACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGAAGGGGCCGTTTGAGGTCAAGGGCATAGTCCGACCTGGGA
CGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACACATGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MSAYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTDRPERKIGRGKSGKYIEKADPKSKDK
GSFSSGRAEYRKAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLQGAPERRNKDKYCRFHREHDHNTSDCWELKRQVEDLIQDGYFKKFVGKPRTRSVP
VEILDNPSISEPDLMEIGAPESSWMDPIADFIRGNSPQDPKERRKLARLQTHVGALDPTWKGPFEVKGIVRPGTYILADLKGDVLAHTWNAEHLKRYYP