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Moc04g05940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g05940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr4:4053772..4054454
RNA-Seq ExpressionMoc04g05940
SyntenyMoc04g05940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.0e-1842.24Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I+ W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDGI
        R++R FI E+   +G+
Subjt:  RKRRGFISEVVSLDGI

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.3e-1642.61Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        G+SF++ L  LA  I +W ++   +    K   I+EI +ID+ E   S        R +LK DLS I L EA+  +Q+CKR+WV EGDEN+SFFHK+CTA
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDG
        R+++  IS++++  G
Subjt:  RKRRGFISEVVSLDG

KAA0045138.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.6e-1743.64Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I  W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEV
        R++R FI E+
Subjt:  RKRRGFISEV

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-1943.97Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        G+SFI+ L  LA  I  W++  LN  A+ K +II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++CTA
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDGI
        R++R FI E+   +G+
Subjt:  RKRRGFISEVVSLDGI

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.0e-1842.61Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I  W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDG
        R++R FI E+   +G
Subjt:  RKRRGFISEVVSLDG

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein6.3e-1742.61Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        G+SF++ L  LA  I +W ++   +    K   I+EI +ID+ E   S        R +LK DLS I L EA+  +Q+CKR+WV EGDEN+SFFHK+CTA
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDG
        R+++  IS++++  G
Subjt:  RKRRGFISEVVSLDG

A0A5A7TQI1 LINE-1 retrotransposable element ORF2 protein1.3e-1743.64Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I  W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEV
        R++R FI E+
Subjt:  RKRRGFISEV

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein8.0e-2043.97Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        G+SFI+ L  LA  I  W++  LN  A+ K +II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++CTA
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDGI
        R++R FI E+   +G+
Subjt:  RKRRGFISEVVSLDGI

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein4.4e-1842.61Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I  W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDG
        R++R FI E+   +G
Subjt:  RKRRGFISEVVSLDG

A0A5D3BUZ3 LINE-1 retrotransposable element ORF2 protein2.0e-1842.24Show/hide
Query:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA
        GFSFI+ L  LA  I+ W++  L+ L   K  II E+  ID+KE        +   R +LK DLS + LKE++   QR K++W+ EGDEN+SFFH++C++
Subjt:  GFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDENTSFFHKVCTA

Query:  RKRRGFISEVVSLDGI
        R++R FI E+   +G+
Subjt:  RKRRGFISEVVSLDGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAATTTAATGCCTTCATCGATGATGCAAATCTTGTTGATCCGTTTTTGACTAACGGTTTCTCATTCATTAAGCATCTGTCCTTGTTAGCACGAGAGATTCACTC
CTGGAGACAGAATTCTCTCAACCAGCTAGCCACACGCAAAGCCACAATTATAGAAGAAATATCTGAGATAGACAGAAAAGAGGAAGCCAACTCCTTTGACTCTTCTGATC
ATCTTATCCGTCGGTCATTAAAAGGAGATCTTAGTGCTATTGTCCTAAAGGAAGCTAGACGTATGAGTCAGAGATGCAAGCGCATGTGGGTTATGGAAGGGGATGAGAAC
ACTTCGTTCTTTCACAAGGTCTGTACAGCTCGCAAACGAAGAGGATTCATATCTGAAGTCGTATCCCTGGATGGGATTAGCCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAATTTAATGCCTTCATCGATGATGCAAATCTTGTTGATCCGTTTTTGACTAACGGTTTCTCATTCATTAAGCATCTGTCCTTGTTAGCACGAGAGATTCACTC
CTGGAGACAGAATTCTCTCAACCAGCTAGCCACACGCAAAGCCACAATTATAGAAGAAATATCTGAGATAGACAGAAAAGAGGAAGCCAACTCCTTTGACTCTTCTGATC
ATCTTATCCGTCGGTCATTAAAAGGAGATCTTAGTGCTATTGTCCTAAAGGAAGCTAGACGTATGAGTCAGAGATGCAAGCGCATGTGGGTTATGGAAGGGGATGAGAAC
ACTTCGTTCTTTCACAAGGTCTGTACAGCTCGCAAACGAAGAGGATTCATATCTGAAGTCGTATCCCTGGATGGGATTAGCCTGTAA
Protein sequenceShow/hide protein sequence
MQKFNAFIDDANLVDPFLTNGFSFIKHLSLLAREIHSWRQNSLNQLATRKATIIEEISEIDRKEEANSFDSSDHLIRRSLKGDLSAIVLKEARRMSQRCKRMWVMEGDEN
TSFFHKVCTARKRRGFISEVVSLDGISL