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Moc04g06280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g06280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCytochrome b6-f complex subunit 7
Genome locationchr4:4315875..4316261
RNA-Seq ExpressionMoc04g06280
SyntenyMoc04g06280
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]4.1e-4990.62Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLS AMSTAAPIAAGSRR QR  NVHYITGLNSFGGLKAHNNVVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

XP_022136275.1 uncharacterized protein LOC111008007 [Momordica charantia]1.8e-60100Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVLVGVAVGFVLLRIEAYVEETE
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]5.9e-4888.98Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA
        ATASATLSPA+STAAPIAAGSRR QR+ NVHYITGLNSFGGLKAHNN+ SLGLP+C D SFA IVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAA
Subjt:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRIEAYVEETE
        IINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  IINGLVLVGVAVGFVLLRIEAYVEETE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]2.3e-4788.19Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA
        ATASATLSP +STAAPIAAGSRR QR+ NVHYITGLNSFGGLKAHNN+ SLGLP+C D SFA IVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAA
Subjt:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRIEAYVEETE
        IINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  IINGLVLVGVAVGFVLLRIEAYVEETE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]1.6e-4889.06Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLSPAM TAAPIAAGSRR QR  NVHYITGLNSFGGLKAHNNVVSLGLP+C D SFA I+SSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein1.6e-4685.94Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLS AMS+AAPI+AGSRR QR  N H+I+GLNSF GLKAHNNVVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

A0A1S3C0U4 uncharacterized protein LOC1034952012.0e-4990.62Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLS AMSTAAPIAAGSRR QR  NVHYITGLNSFGGLKAHNNVVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

A0A6J1C3G5 uncharacterized protein LOC1110080078.6e-61100Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
        MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEAYVEETE
        AIINGLVLVGVAVGFVLLRIEAYVEETE
Subjt:  AIINGLVLVGVAVGFVLLRIEAYVEETE

A0A6J1GND2 uncharacterized protein LOC1114555031.6e-4686.61Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA
        AT SATLSP +STAAPIAAGSRR QR+ NVHYITGLNSF GLKAHNN+ SLGLP+C D SFA IVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAA
Subjt:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRIEAYVEETE
        IINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  IINGLVLVGVAVGFVLLRIEAYVEETE

A0A6J1I5T0 uncharacterized protein LOC1114709412.9e-4888.98Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA
        ATASATLSPA+STAAPIAAGSRR QR+ NVHYITGLNSFGGLKAHNN+ SLGLP+C D SFA IVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAA
Subjt:  ATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRIEAYVEETE
        IINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  IINGLVLVGVAVGFVLLRIEAYVEETE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)1.8e-0783.33Show/hide
Query:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRIEAYVEE
        NAA EIFRIAA++NGL LVGVA+GFVLLRIEA VEE
Subjt:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRIEAYVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative1.2e-2556.15Show/hide
Query:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR
        MATA+A    + + +  ++ +G  + +    V YITGLNS+GGLKA NN VVS+G PLC +  FA +V SL      KG+  G GGALS+TCNA GEIF+
Subjt:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR

Query:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE
        IAAI+N L LVGVAVGFVLLRIE  VEE E
Subjt:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative1.2e-2556.15Show/hide
Query:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR
        MATA+A    + + +  ++ +G  + +    V YITGLNS+GGLKA NN VVS+G PLC +  FA +V SL      KG+  G GGALS+TCNA GEIF+
Subjt:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR

Query:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE
        IAAI+N L LVGVAVGFVLLRIE  VEE E
Subjt:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative4.4e-0936.92Show/hide
Query:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR
        MATA+A    + + +  ++ +G  + +    V YITGLNS+GGLKA NN VVS+G PLC +  FA +V SLK                            
Subjt:  MATASATLSPAMSTAAPIA-AGSRRSQRHHNVHYITGLNSFGGLKAHNN-VVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFR

Query:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE
                   G  VGFVLLRIE  VEE E
Subjt:  IAAIINGLVLVGVAVGFVLLRIEAYVEETE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGAGCCAGAGGCACCACAATGTCCACTACATCACTGGCCT
CAACTCCTTTGGTGGGCTGAAGGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCCTGTGCCCTGACCACTCCTTTGCAAAAATTGTGAGTTCTTTGAAATATCCATCAA
AAGGAAAGGGCAAAAATGGCGGCGGCGGCGGCGCCCTGTCCTCCACCTGTAATGCCGCCGGTGAGATTTTCAGGATTGCGGCCATTATCAATGGGCTGGTTCTTGTGGGA
GTGGCTGTTGGGTTTGTTCTTCTCCGGATTGAGGCATATGTGGAGGAGACAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGAGCCAGAGGCACCACAATGTCCACTACATCACTGGCCT
CAACTCCTTTGGTGGGCTGAAGGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCCTGTGCCCTGACCACTCCTTTGCAAAAATTGTGAGTTCTTTGAAATATCCATCAA
AAGGAAAGGGCAAAAATGGCGGCGGCGGCGGCGCCCTGTCCTCCACCTGTAATGCCGCCGGTGAGATTTTCAGGATTGCGGCCATTATCAATGGGCTGGTTCTTGTGGGA
GTGGCTGTTGGGTTTGTTCTTCTCCGGATTGAGGCATATGTGGAGGAGACAGAGTGA
Protein sequenceShow/hide protein sequence
MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDHSFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAAIINGLVLVG
VAVGFVLLRIEAYVEETE