CuGenDBv2

Gene ID	Moc04g06780
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	30S ribosomal protein S7, chloroplastic
Genome location	chr4:4757123..4759754
RNA-Seq Expression	Moc04g06780
Synteny	Moc04g06780
Gene Ontology terms	GO:0005840 - ribosome (cellular component) GO:0009536 - plastid (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ARD04974.1 ribosomal protein S7 [Sibbaldia retusa]

2.6e-12

54.76

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQD
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  + I R    +  +S +
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQD

QFQ48935.1 ribosomal protein S7 [Phyllagathis rotundifolia]

3.4e-12

55.42

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  GL +  +  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

QWY86651.1 ribosomal protein S7 [Prioria balsamifera]

1.5e-12

64.86

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+    T +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

YP_009916954.1 ribosomal protein S7 [Primula pellucida]

2.0e-12

49.02

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Query:  HLLYH---SVSWEL---PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDV
        H+L H   S+++++     KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+S++ +  G  ++ +  ++ L+D 
Subjt:  HLLYH---SVSWEL---PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDV

Query:  SQ
        ++
Subjt:  SQ

YP_009940001.1 ribosomal protein S7 [Phalaenopsis mannii]

3.4e-12

56.63

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT      +  L+ ++ +  G  +  R  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

TrEMBL top hits

e value

%identity

Alignment

A0A1V0J8H9 Ribosomal protein S7

1.3e-12

54.76

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQD
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  + I R    +  +S +
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQD

A0A2H4E6V7 30S ribosomal protein S7, chloroplastic

2.1e-12

56.63

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  R  ++ LLD ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

A0A5P8H2B2 30S ribosomal protein S7, chloroplastic

1.6e-12

55.42

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  GL +  +  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

A0A7G0XC77 30S ribosomal protein S7, chloroplastic

9.6e-13

49.02

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Query:  HLLYH---SVSWEL---PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDV
        H+L H   S+++++     KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+S++ +  G  ++ +  ++ L+D 
Subjt:  HLLYH---SVSWEL---PQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDV

Query:  SQ
        ++
Subjt:  SQ

A0A7L7SIW6 30S ribosomal protein S7, chloroplastic

1.6e-12

56.63

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ TT      +  L+ ++ +  G  +  R  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

SwissProt top hits

e value

%identity

Alignment

Q0ZIV9 30S ribosomal protein S7, chloroplastic

9.9e-15

50.53

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Query:  LLYHSVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        ++Y SV      KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  +  ++ L+D ++
Subjt:  LLYHSVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

Q6EM62 30S ribosomal protein S7, chloroplastic

9.9e-15

63.51

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Q6EM87 30S ribosomal protein S7, chloroplastic

1.3e-14

54.22

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L++++ +  G  +  +  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

Q6EMA2 30S ribosomal protein S7, chloroplastic

9.9e-15

50.53

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Query:  LLYHSVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        +LY +V      KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L++++ +  G  +  +  ++ L+D ++
Subjt:  LLYHSVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

Q9GFN2 30S ribosomal protein S7, chloroplastic

9.9e-15

63.51

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00900.1 Ribosomal protein S7p/S5e family protein

1.6e-15

54.22

Show/hide

Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  +  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

ATCG01240.1 ribosomal protein S7

1.6e-15

54.22

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Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  +  ++ L+D ++
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIRRQNQRLLDVSQ

Sequences

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CDS sequence

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ATGAGGCAGCTTACAGGGACGGTTACACGATACGTTTGGCATATATGCCCCATGCCCTCCAAACAGTACGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGATCTTC
ACGACACCTCCTCTACCATAGTGTGAGCTGGGAGTTGCCCCAGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAA
CTCTCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATGCCGACCACTATATCAACCACTACGATATTGGGCTCTTTAATGAGT
TCCACGAACCAGAACCACGGGCTAAAACTTACGATTCGAAGACAAAATCAGAGACTACTAGACGTCTCGCAAGACTGCTCCCTGTGTTTTTGGATGTATGGCGATACATT
GAATCTACCTGTTGGGCAATTTGGGATGACTGAAATTCTGCACTTCATGGATGGCAGTTATCCCCCTCTGAAATTAAAGGGGAATGGATTAACACCTATATTGGCAATTT
TTTGGAAGCGCAAAATAATACTGCATGTCGGGAGGATTCGACTGGTCTGGGATGTATTATCCGTGATTCCTCTAGTGCACTCGTGGCCGCAAAATCTTTACGTCTATAAT
GGCAGAAATTCGTGGGATATTGGAAGGCTTGTGGCTTTCAATTTCTATGGATTGCCTCCGCATTGA

mRNA sequence

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Protein sequence

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MRQLTGTVTRYVWHICPMPSKQYGSLSARTAHTPRSSRHLLYHSVSWELPQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMS
STNQNHGLKLTIRRQNQRLLDVSQDCSLCFWMYGDTLNLPVGQFGMTEILHFMDGSYPPLKLKGNGLTPILAIFWKRKIILHVGRIRLVWDVLSVIPLVHSWPQNLYVYN
GRNSWDIGRLVAFNFYGLPPH

Moc04g06780 (gene) of Bitter gourd (OHB3-1) v2 genome