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Moc04g07150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g07150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H protein
Genome locationchr4:5054656..5055474
RNA-Seq ExpressionMoc04g07150
SyntenyMoc04g07150
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067681.1 UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa]9.1e-1029.24Show/hide
Query:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN
        MD+ P+CP C +  ET    + GC  A ++W   LP+V+  G +    F D   +  ++L+P +  L  I CW  W+D N  +   VV DV  K  W+++
Subjt:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN

Query:  YAMELLTRRRKTNEAQKNL----------------PSLISSHNVNSPLLVEICAIREVVCLAERCIHVGRE
        Y    +     T+    N+                 +     ++NSPLL+E  AI+E + LA    H+G E
Subjt:  YAMELLTRRRKTNEAQKNL----------------PSLISSHNVNSPLLVEICAIREVVCLAERCIHVGRE

KAF7823736.1 putative ribonuclease H-like domain-containing protein [Senna tora]1.0e-0538.37Show/hide
Query:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIW-DISLPMVMGLGVDCNCSFIDRW-----ALWRENLTPKELPLAGIICWANWNDKN
        MDV P+CPIC  EDE+  HT +GC++ G IW   ++P V     DC   F++ W     A W  N          IIC+  WN +N
Subjt:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIW-DISLPMVMGLGVDCNCSFIDRW-----ALWRENLTPKELPLAGIICWANWNDKN

XP_022141766.1 uncharacterized protein LOC111012047 [Momordica charantia]7.9e-6267.2Show/hide
Query:  VMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNYAMELLTRRRKTNEAQKNLP-----------------
        +MGLGVDCNCSFIDRWALWRENLT +EL LAGIICWANWND+NQR NG  VADVHT+SDWITNYAMELLTRRRKTNEAQKNLP                 
Subjt:  VMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNYAMELLTRRRKTNEAQKNLP-----------------

Query:  --------------------------SLISSHNVNSPLLVEICAIREVVCLAERCIHVGREANKPTHFLMGEALHQNNPVLWLSDF
                                  +LISSHNVNSPLL EICAIRE V LAERCIHVGRE NKP HFL GEALHQN+ VLWLSDF
Subjt:  --------------------------SLISSHNVNSPLLVEICAIREVVCLAERCIHVGREANKPTHFLMGEALHQNNPVLWLSDF

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]2.4e-1034.26Show/hide
Query:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN
        +D  P C +C ++ ETTDH L  C +A ++W+I LP       D N S  D      E+L+  +  L G+  WA WND+N  +    + D   +SDWI  
Subjt:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN

Query:  YAMELLTR
        Y  +   R
Subjt:  YAMELLTR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.5e-1237.11Show/hide
Query:  PVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNY
        P C IC +  E+  H    C +A QIW    P +  L  + N SF++ W+   E L PK+L LA I  W  WND+N   +G+ V+ V  K +W+T +
Subjt:  PVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNY

TrEMBL top hitse value%identityAlignment
A0A5A7VQ24 Adenylate kinase4.4e-1029.24Show/hide
Query:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN
        MD+ P+CP C +  ET    + GC  A ++W   LP+V+  G +    F D   +  ++L+P +  L  I CW  W+D N  +   VV DV  K  W+++
Subjt:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN

Query:  YAMELLTRRRKTNEAQKNL----------------PSLISSHNVNSPLLVEICAIREVVCLAERCIHVGRE
        Y    +     T+    N+                 +     ++NSPLL+E  AI+E + LA    H+G E
Subjt:  YAMELLTRRRKTNEAQKNL----------------PSLISSHNVNSPLLVEICAIREVVCLAERCIHVGRE

A0A6J1CK80 uncharacterized protein LOC1110120473.8e-6267.2Show/hide
Query:  VMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNYAMELLTRRRKTNEAQKNLP-----------------
        +MGLGVDCNCSFIDRWALWRENLT +EL LAGIICWANWND+NQR NG  VADVHT+SDWITNYAMELLTRRRKTNEAQKNLP                 
Subjt:  VMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNYAMELLTRRRKTNEAQKNLP-----------------

Query:  --------------------------SLISSHNVNSPLLVEICAIREVVCLAERCIHVGREANKPTHFLMGEALHQNNPVLWLSDF
                                  +LISSHNVNSPLL EICAIRE V LAERCIHVGRE NKP HFL GEALHQN+ VLWLSDF
Subjt:  --------------------------SLISSHNVNSPLLVEICAIREVVCLAERCIHVGREANKPTHFLMGEALHQNNPVLWLSDF

A0A6J1CTE3 uncharacterized protein LOC1110145781.2e-1034.26Show/hide
Query:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN
        +D  P C +C ++ ETTDH L  C +A ++W+I LP       D N S  D      E+L+  +  L G+  WA WND+N  +    + D   +SDWI  
Subjt:  MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITN

Query:  YAMELLTR
        Y  +   R
Subjt:  YAMELLTR

A0A6J1DPU1 uncharacterized protein LOC1110224266.6e-0631.43Show/hide
Query:  QIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTK------SDW---ITNYAMELLTRRRKTNEAQ---
        QIW   LP    LG   N  +++RW+ W +NL+   L LA I CWA WND N   N + + +   K      + W        +++ T    + E     
Subjt:  QIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTK------SDW---ITNYAMELLTRRRKTNEAQ---

Query:  --------KNLPSLISSHNVNSPLLVEICAIREVVCLAER
                + + ++I  H V +PLL EI AIRE + LA R
Subjt:  --------KNLPSLISSHNVNSPLLVEICAIREVVCLAER

A0A6J1DX30 uncharacterized protein LOC1110248747.3e-1337.11Show/hide
Query:  PVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNY
        P C IC +  E+  H    C +A QIW    P +  L  + N SF++ W+   E L PK+L LA I  W  WND+N   +G+ V+ V  K +W+T +
Subjt:  PVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein8.0e-0430.49Show/hide
Query:  PVCPICLEEDETTDHTLVGCNKAGQIWDIS-LP----MVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQ
        P C  C +EDET+ H    C  A Q+W  S +P       G+ ++     +    L   N  P+   LA  I W  W  +NQ
Subjt:  PVCPICLEEDETTDHTLVGCNKAGQIWDIS-LP----MVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCTTCCCTGTTTGTCCTATTTGCCTTGAAGAGGATGAGACAACGGACCACACCTTAGTGGGTTGCAATAAGGCGGGCCAGATTTGGGACATTTCCCTTCCTAT
GGTGATGGGCCTTGGTGTCGATTGCAACTGCAGTTTCATTGATAGATGGGCGCTTTGGAGAGAAAACCTAACACCAAAGGAATTGCCTTTAGCGGGCATCATTTGTTGGG
CGAATTGGAATGACAAAAACCAAAGAAAAAATGGTGAAGTCGTTGCGGATGTTCACACAAAATCTGATTGGATCACAAATTATGCTATGGAGCTTTTAACTCGGAGAAGA
AAGACTAACGAGGCCCAGAAGAATTTACCTTCCTTAATTTCATCCCACAATGTGAATTCCCCTCTGTTGGTCGAAATTTGTGCTATTCGTGAAGTAGTTTGCCTAGCTGA
GAGATGTATACATGTCGGAAGAGAGGCTAACAAACCGACTCATTTCCTTATGGGTGAGGCTCTGCATCAGAATAATCCAGTATTGTGGCTTTCTGATTTCCCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTCTTCCCTGTTTGTCCTATTTGCCTTGAAGAGGATGAGACAACGGACCACACCTTAGTGGGTTGCAATAAGGCGGGCCAGATTTGGGACATTTCCCTTCCTAT
GGTGATGGGCCTTGGTGTCGATTGCAACTGCAGTTTCATTGATAGATGGGCGCTTTGGAGAGAAAACCTAACACCAAAGGAATTGCCTTTAGCGGGCATCATTTGTTGGG
CGAATTGGAATGACAAAAACCAAAGAAAAAATGGTGAAGTCGTTGCGGATGTTCACACAAAATCTGATTGGATCACAAATTATGCTATGGAGCTTTTAACTCGGAGAAGA
AAGACTAACGAGGCCCAGAAGAATTTACCTTCCTTAATTTCATCCCACAATGTGAATTCCCCTCTGTTGGTCGAAATTTGTGCTATTCGTGAAGTAGTTTGCCTAGCTGA
GAGATGTATACATGTCGGAAGAGAGGCTAACAAACCGACTCATTTCCTTATGGGTGAGGCTCTGCATCAGAATAATCCAGTATTGTGGCTTTCTGATTTCCCTCCTTGA
Protein sequenceShow/hide protein sequence
MDVFPVCPICLEEDETTDHTLVGCNKAGQIWDISLPMVMGLGVDCNCSFIDRWALWRENLTPKELPLAGIICWANWNDKNQRKNGEVVADVHTKSDWITNYAMELLTRRR
KTNEAQKNLPSLISSHNVNSPLLVEICAIREVVCLAERCIHVGREANKPTHFLMGEALHQNNPVLWLSDFPP