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Moc04g07330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g07330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGRF-type domain-containing protein
Genome locationchr4:5190425..5190982
RNA-Seq ExpressionMoc04g07330
SyntenyMoc04g07330
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010666 - Zinc finger, GRF-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645848.1 hypothetical protein Csa_017077 [Cucumis sativus]1.2e-5572.11Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVI
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ + I
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVI

KAF2294607.1 hypothetical protein GH714_013386 [Hevea brasiliensis]1.3e-4662.24Show/hide
Query:  EESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVT
        E+SE+ C CGLPAKLR SQTP+NPFRLFYNCP+  + QCGFF W DEP P+ DRH +E+NLIRN C  LQ RLDEIE+ H+N+++ WER+K EL L+L T
Subjt:  EESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVT

Query:  LQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        +Q++LD+I+ R+R  NES  MPPLD L I DDEGDD + I+T+
Subjt:  LQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

XP_004136954.1 uncharacterized protein LOC101219463 [Cucumis sativus]2.0e-5874Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

XP_008455003.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo]2.5e-5874.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIR DD+ +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL

XP_022148840.1 uncharacterized protein LOC111017399 [Momordica charantia]8.1e-81100Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

TrEMBL top hitse value%identityAlignment
A0A0A0K2H6 GRF-type domain-containing protein9.5e-5974Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

A0A1S4E0B8 uncharacterized protein LOC1034952841.2e-5874.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIR DD+ +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL

A0A5A7SJM5 GRF-type domain-containing protein1.2e-5874.17Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MS+SEI+EES LECYCG  AKLR S T KNPFRLFYNCPKE+SQQCGFFHWADEPEPSDDRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL
        LTL+L TLQ+QLDDI +RIR+ NESFSMPP ++LSIR DD+ +D LV+Y L
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIR-DDEGDDALVIYTL

A0A6A6L2I8 GRF-type domain-containing protein6.4e-4762.24Show/hide
Query:  EESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVT
        E+SE+ C CGLPAKLR SQTP+NPFRLFYNCP+  + QCGFF W DEP P+ DRH +E+NLIRN C  LQ RLDEIE+ H+N+++ WER+K EL L+L T
Subjt:  EESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVT

Query:  LQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        +Q++LD+I+ R+R  NES  MPPLD L I DDEGDD + I+T+
Subjt:  LQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

A0A6J1D427 uncharacterized protein LOC1110173993.9e-81100Show/hide
Query:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
        MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE
Subjt:  MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEE

Query:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
        LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL
Subjt:  LTLQLVTLQSQLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54930.1 GRF zinc finger / Zinc knuckle protein3.0e-0442.22Show/hide
Query:  ELECYCGL-PAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADE
        ++ C C   P    TS+T KNP R FY CP      CG+F W D+
Subjt:  ELECYCGL-PAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADE

AT3G42860.1 zinc knuckle (CCHC-type) family protein3.2e-0648Show/hide
Query:  ELECYCGLP-AKLRTSQTPKNPFRLFYNCP-KEISQQCGFFHWADEPEPS
        E  C CG+    + TS TPKNP R FY CP +E +  CGFF W D  + S
Subjt:  ELECYCGLP-AKLRTSQTPKNPFRLFYNCP-KEISQQCGFFHWADEPEPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCGGAAATTTTTGAAGAATCTGAACTAGAATGTTACTGTGGACTGCCTGCAAAACTGAGAACATCTCAGACACCCAAAAATCCATTCAGATTATTCTACAA
CTGTCCAAAGGAAATATCTCAACAATGTGGTTTTTTTCATTGGGCTGATGAACCCGAACCATCTGATGATAGACACGTTGAGGAACTAAACTTAATCCGTAATGTGTGCC
TTCATCTACAAGATAGATTAGACGAAATCGAAGAGGAACATGATAATGAGAAAGCTGAGTGGGAAAGGGACAAAGAAGAGCTAACATTGCAACTAGTAACGCTGCAATCT
CAGCTTGATGATATTCAGCATAGAATAAGGATGGCAAATGAATCTTTTTCAATGCCTCCCTTGGATGCACTTTCCATTAGGGATGACGAGGGTGACGATGCATTAGTTAT
ATATACTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTTCGGAAATTTTTGAAGAATCTGAACTAGAATGTTACTGTGGACTGCCTGCAAAACTGAGAACATCTCAGACACCCAAAAATCCATTCAGATTATTCTACAA
CTGTCCAAAGGAAATATCTCAACAATGTGGTTTTTTTCATTGGGCTGATGAACCCGAACCATCTGATGATAGACACGTTGAGGAACTAAACTTAATCCGTAATGTGTGCC
TTCATCTACAAGATAGATTAGACGAAATCGAAGAGGAACATGATAATGAGAAAGCTGAGTGGGAAAGGGACAAAGAAGAGCTAACATTGCAACTAGTAACGCTGCAATCT
CAGCTTGATGATATTCAGCATAGAATAAGGATGGCAAATGAATCTTTTTCAATGCCTCCCTTGGATGCACTTTCCATTAGGGATGACGAGGGTGACGATGCATTAGTTAT
ATATACTTTGTAA
Protein sequenceShow/hide protein sequence
MSTSEIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVEELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVTLQS
QLDDIQHRIRMANESFSMPPLDALSIRDDEGDDALVIYTL