; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g07400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g07400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpumilio homolog 12-like
Genome locationchr4:5228655..5232185
RNA-Seq ExpressionMoc04g07400
SyntenyMoc04g07400
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV73745.1 PUF domain-containing protein, partial [Cephalotus follicularis]5.9e-4234.11Show/hide
Query:  EPFIRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLH
        +P  RPSN +     +G +  +A + +G R ++ ++E     +   I   VK+ +HELM+ P+ N ++Q L   C+E  +  ++LSL+  ++  + +C H
Subjt:  EPFIRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLH

Query:  SLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPL
        S G + + KLL  ++  + + L    +    V L KS   GH V+  CFR  S ++ + +L +IA N L++A DK+GCC+L  C+ +AEG  R  L++ +
Subjt:  SLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPL

Query:  IQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCL-GCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVA
        I  +  L+ H Y N+V+Q+L+ +    +   ++  L+  +V L ++K GS+VVEKCL  CGE E+A I  E++ N    ++V  + YGNYV Q ALSV+
Subjt:  IQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCL-GCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVA

KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]5.9e-4247.29Show/hide
Query:  KAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLR---GVLVTPLI
        + VV L+  L  P  Q +  +++  H + LAK    GH V+ +CF+N   Q NE+I+L +A N LELA+ +  CCIL  CI Y+   LR    VL++PLI
Subjt:  KAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLR---GVLVTPLI

Query:  QEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNYVAQKALSVAK
        Q+   LS H Y N+VIQF+I+LD  NIG R+I+ L +KFVEL + K GS+VVEKCL C E  +  IIFEI+E   ++  IQ+ TNQYGN+V Q  +S+AK
Subjt:  QEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNYVAQKALSVAK

Query:  GTV
        G +
Subjt:  GTV

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]2.6e-4248.8Show/hide
Query:  IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRN
        +H +++HPLGN  +  L +   CH  FI  LLLSL    +D FL + LH LG + VV L+  L  P  Q + A+++S H + LAK    GH V+ +CF++
Subjt:  IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRN

Query:  LSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKA
         S Q NE+ILL +A N LELA+++ GCCIL  CI Y+      LR VL+TPLI++A  LS H Y N+VIQF+I+LD  NIG RVI+ L +KFVEL + K 
Subjt:  LSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKA

Query:  GSHVVEKCL
        GS+VVEKC+
Subjt:  GSHVVEKCL

XP_020552057.1 putative pumilio homolog 8, chloroplastic [Sesamum indicum]1.9e-4035.19Show/hide
Query:  AMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLL
        A D    R ++ V+E G   E   I   VKD I ELM++  GN ++Q L   C+E  + +L++ +I        +C+   G +AV KL+  ++  + + L
Subjt:  AMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLL

Query:  FAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLIE
           V+    VAL K +  GH V+ +C +  S +DN+ IL  +A N L++A DK+GCC+L  C+ +A+G  R  L+  +   +  LS H Y N+V+Q+++ 
Subjt:  FAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLIE

Query:  LDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRAL
        L   ++ A +I  L   +V L ++K GS+VVEKCL   E +    I   + N  N+++V  + YGNYVAQ AL+++KGTV  N+  L
Subjt:  LDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRAL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]7.0e-229100Show/hide
Query:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP
        MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP
Subjt:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP

Query:  FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
        FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
Subjt:  FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG

Query:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
        QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
Subjt:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE

Query:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
        ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
Subjt:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG

TrEMBL top hitse value%identityAlignment
A0A1Q3C0F9 PUF domain-containing protein (Fragment)2.8e-4234.11Show/hide
Query:  EPFIRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLH
        +P  RPSN +     +G +  +A + +G R ++ ++E     +   I   VK+ +HELM+ P+ N ++Q L   C+E  +  ++LSL+  ++  + +C H
Subjt:  EPFIRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLH

Query:  SLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPL
        S G + + KLL  ++  + + L    +    V L KS   GH V+  CFR  S ++ + +L +IA N L++A DK+GCC+L  C+ +AEG  R  L++ +
Subjt:  SLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPL

Query:  IQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCL-GCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVA
        I  +  L+ H Y N+V+Q+L+ +    +   ++  L+  +V L ++K GS+VVEKCL  CGE E+A I  E++ N    ++V  + YGNYV Q ALSV+
Subjt:  IQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCL-GCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVA

A0A1S3C139 putative pumilio homolog 8, chloroplastic1.3e-4248.8Show/hide
Query:  IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRN
        +H +++HPLGN  +  L +   CH  FI  LLLSL    +D FL + LH LG + VV L+  L  P  Q + A+++S H + LAK    GH V+ +CF++
Subjt:  IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRN

Query:  LSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKA
         S Q NE+ILL +A N LELA+++ GCCIL  CI Y+      LR VL+TPLI++A  LS H Y N+VIQF+I+LD  NIG RVI+ L +KFVEL + K 
Subjt:  LSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKA

Query:  GSHVVEKCL
        GS+VVEKC+
Subjt:  GSHVVEKCL

A0A5D2W0A0 PUM-HD domain-containing protein4.5e-4034.49Show/hide
Query:  IRRMAMDGEGYRVVKR-----VIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCR
        I  +A D +G R +++     +I+R D+     ++  VKD +HELM+H   N ++Q LF   ++    +LLL LI ++  F+ VC   LG +AV KL+ R
Subjt:  IRRMAMDGEGYRVVKR-----VIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCR

Query:  LSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYA
        + + +   +   V+    V L  +   GH ++  C    S +D + I  EIA+N +++A DK+GCC+L  C+ + +   R  ++  +I  A  LS H Y 
Subjt:  LSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYA

Query:  NFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
        N+V+QF++ +   ++ + +I  LR  +V L ++K GS+VVEKC+ C  + A+ II EIM + + +++V  + YGNYV Q AL V+KG
Subjt:  NFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG

A0A5D2ZYG0 PUM-HD domain-containing protein2.0e-4034.51Show/hide
Query:  IRRMAMDGEGYRVVKRVIERGDL-RETLN-IVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSN
        I  +A D +G R++++  E   + RE ++ ++  VKD +HELM+H + N ++Q LF   ++  + +LLL L+ ++  F+ VC   LG +AV KL+ R+ +
Subjt:  IRRMAMDGEGYRVVKRVIERGDL-RETLN-IVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSN

Query:  PQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFV
         +   +   V+    V L  +   GH ++  C    S +D + I  EIA+N +++A DK+GCC+L  C+ + +   R  ++  +I  A  LS H Y N+V
Subjt:  PQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFV

Query:  IQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
        +QF++ +   ++ + +I  LR  +V L ++K GS+VVEKC+ C  + A+ II EIM + + +++V  + YGNYV Q AL V+KG
Subjt:  IQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG

A0A6J1D5W5 pumilio homolog 12-like3.4e-229100Show/hide
Query:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP
        MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP
Subjt:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEP

Query:  FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
        FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
Subjt:  FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG

Query:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
        QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
Subjt:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE

Query:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
        ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG
Subjt:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKG

SwissProt top hitse value%identityAlignment
P0DN95 Pumilio homolog 156.1e-2629.24Show/hide
Query:  PSNGNVYGHGRGIRR----MAMDGEGYRVVKRVIERGDLRETLN-IVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHS
        P + + YG+  GIR      A DG    +++ VI +G L+ET++ I + +   + ELML   G+ V + L   C +  I  +L  ++ +   F+ +C+H+
Subjt:  PSNGNVYGHGRGIRR----MAMDGEGYRVVKRVIERGDLRETLN-IVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHS

Query:  LGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLI
         G  A+  L+  L + +    F   + +  + L K     H V++ CF   S      +L  I  N  ++A D+NGCC+L   I  +   LR  L+  +I
Subjt:  LGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLI

Query:  QEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGT
          A  L  + Y N+V+Q+L+ L    + + + + L   +V+L   K GSHVV+KCL   E  +  II E++ + ++   +  + YG+YV Q A  V++  
Subjt:  QEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGT

Query:  V
        V
Subjt:  V

Q1PFN9 Pumilio homolog 91.1e-3031.31Show/hide
Query:  VYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLL
        +YG    +  MA D  G RV+++++E G   E   I+  + D + EL + P GN +VQ LF    E     ++  L       + +CL++ G + V K++
Subjt:  VYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLL

Query:  CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHF
          +   Q   L    +    +AL K    G+ V+ +C + L   DNE +L        E+A  ++GCC+L  CI  + G  R  LV  + + + HLS   
Subjt:  CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHF

Query:  YANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRA
        + N+V+Q+LI  DQ     +++   R  + EL   K  SHV+EKCL    +  A I+ E++    N+  +  + Y NYV Q ALSV KG V   L A
Subjt:  YANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRA

Q9LDW3 Pumilio homolog 114.5e-2929.12Show/hide
Query:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL
        MA D  G R++++ ++ G+  + + I + V + + EL   P GN ++Q L   C+E     +L+ L  K  L + + +++ G + V KL+  ++  +   
Subjt:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL

Query:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI
        L    +    ++L +    G+ V++NC +  S  DN+ IL       +E+A  ++GCC+L  C+ Y+ G     LV  + + +  L+   + N+++Q++I
Subjt:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI

Query:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL
        E      G  V+  LR  +V+L   K GSHVVEKCL    +  + I+ E++ +  N+  +  + Y NYV Q ALS  KG V  +L
Subjt:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL

Q9LM20 Putative pumilio homolog 8, chloroplastic2.2e-2828.07Show/hide
Query:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL
        MA D  G R ++ + E G   + L I   V   + ELM+ P GN ++Q L   C+E     ++L +  +    + + L++ G + V +L+  +   +   
Subjt:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL

Query:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI
        L    +    + L +    G+ V+  C + LS +DNE I  +     +++A  ++GCC+L  CI Y+ G  R  LVT + + +  L+   Y N+ +QF++
Subjt:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI

Query:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL
        EL   +  A ++  L+  +VEL + K  SH+VE+CL    +    I+ E++ +  ++  +  + Y N+V Q AL+V KG++   L
Subjt:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL

Q9LVC3 Pumilio homolog 121.1e-3029.1Show/hide
Query:  IRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
        ++P   N     RG I  +A D  G R ++R+    D  +   I   + D I ELM+ P GN +VQ L   C+E     ++ S+  K  L + +     G
Subjt:  IRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG

Query:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
         +AV K++   +  + ++   +    HG+     +  G+ V+  C + L     + +      + +ELA D++GCC+L  C+ Y+EG  +  LV+ +   
Subjt:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE

Query:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTV
        A  LS   + N+V+Q++ EL        +++ L   + EL + K  S+VVEKCL   +D+    I   + N     QV  + YGNYV Q AL  +KG V
Subjt:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTV

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 81.6e-2928.07Show/hide
Query:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL
        MA D  G R ++ + E G   + L I   V   + ELM+ P GN ++Q L   C+E     ++L +  +    + + L++ G + V +L+  +   +   
Subjt:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL

Query:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI
        L    +    + L +    G+ V+  C + LS +DNE I  +     +++A  ++GCC+L  CI Y+ G  R  LVT + + +  L+   Y N+ +QF++
Subjt:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI

Query:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL
        EL   +  A ++  L+  +VEL + K  SH+VE+CL    +    I+ E++ +  ++  +  + Y N+V Q AL+V KG++   L
Subjt:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL

AT1G35730.1 pumilio 97.7e-3231.31Show/hide
Query:  VYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLL
        +YG    +  MA D  G RV+++++E G   E   I+  + D + EL + P GN +VQ LF    E     ++  L       + +CL++ G + V K++
Subjt:  VYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLL

Query:  CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHF
          +   Q   L    +    +AL K    G+ V+ +C + L   DNE +L        E+A  ++GCC+L  CI  + G  R  LV  + + + HLS   
Subjt:  CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHF

Query:  YANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRA
        + N+V+Q+LI  DQ     +++   R  + EL   K  SHV+EKCL    +  A I+ E++    N+  +  + Y NYV Q ALSV KG V   L A
Subjt:  YANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRA

AT1G78160.1 pumilio 71.7e-2625.99Show/hide
Query:  NGVPNNFEAGSSRMWRSGAGEP--FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYF
        NG   + +  ++R   S  G P     PS  N+      +  MA D  G R ++R+ + G   + + I   V   + ELM+ P GN ++Q L   C E  
Subjt:  NGVPNNFEAGSSRMWRSGAGEP--FIRPSNGNVYGHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYF

Query:  IKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCC
           ++L    +    + + L++ G + V +L+  + + +   L  + +    + L K    G+ V+  C + LS +DN+ I         E+A  ++GCC
Subjt:  IKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCC

Query:  ILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWI
        +L  CI Y+    R  L+  + + +  L+   + N+ +QF+IEL   +  A ++  L+  +V+L + K  SH+VE+CL    +    I+ E++ +  ++ 
Subjt:  ILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWI

Query:  QVFTNQYGNYVAQKALSVAKGTVGLNL
        Q+  + Y N+V Q AL+  KG +  +L
Subjt:  QVFTNQYGNYVAQKALSVAKGTVGLNL

AT4G08840.1 pumilio 113.2e-3029.12Show/hide
Query:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL
        MA D  G R++++ ++ G+  + + I + V + + EL   P GN ++Q L   C+E     +L+ L  K  L + + +++ G + V KL+  ++  +   
Subjt:  MAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQL

Query:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI
        L    +    ++L +    G+ V++NC +  S  DN+ IL       +E+A  ++GCC+L  C+ Y+ G     LV  + + +  L+   + N+++Q++I
Subjt:  LFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLI

Query:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL
        E      G  V+  LR  +V+L   K GSHVVEKCL    +  + I+ E++ +  N+  +  + Y NYV Q ALS  KG V  +L
Subjt:  ELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNL

AT5G56510.1 pumilio 127.7e-3229.1Show/hide
Query:  IRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG
        ++P   N     RG I  +A D  G R ++R+    D  +   I   + D I ELM+ P GN +VQ L   C+E     ++ S+  K  L + +     G
Subjt:  IRPSNGNVYGHGRG-IRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLG

Query:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE
         +AV K++   +  + ++   +    HG+     +  G+ V+  C + L     + +      + +ELA D++GCC+L  C+ Y+EG  +  LV+ +   
Subjt:  QKAVVKLLCRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQE

Query:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTV
        A  LS   + N+V+Q++ EL        +++ L   + EL + K  S+VVEKCL   +D+    I   + N     QV  + YGNYV Q AL  +KG V
Subjt:  ARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCAAACACCATTCCAGCTTCCAAACTACCTTACAAATGGCAATCGAATATTTACCAATCTTAACCCTTCTTCTTCAACCTCTTCCATCCAAGCTTTGGAAGC
TCAACTCGGCCGCTTACAGCTGTTGTCGTCGGTGGCAGCAGTCGACGTTTTCGATCACTCATGGCCGCCGTATTTCATGAGCAATCACGTGGATAGCCCCAACTTCTTTC
AGCCTCCCATGCACAATGGTGTACCAAATAACTTTGAAGCTGGAAGCTCGAGAATGTGGCGGTCGGGAGCGGGTGAGCCGTTCATCAGGCCGAGCAACGGAAATGTTTAT
GGGCATGGTAGAGGAATAAGGAGGATGGCCATGGATGGAGAAGGCTACCGAGTGGTGAAGAGAGTGATTGAAAGAGGGGATTTGAGAGAAACCCTAAACATTGTTGAAGG
AGTAAAGGATTGCATTCATGAACTAATGCTTCATCCATTGGGAAACGACGTCGTACAAACTCTCTTCCGATTCTGCCATGAATATTTCATAAAGGACCTTCTTCTCTCCT
TAATTGGAAAACAAGATCTCTTTCTAGCTGTTTGCCTTCACAGCCTCGGACAAAAAGCTGTGGTAAAATTGTTATGCCGTTTGAGCAACCCCCAACACCAGTTACTCTTT
GCAGTAGTGATCAGCCACCATGGCGTCGCCTTGGCAAAAAGCTCCGGTCCCGGCCACGACGTGCTCATAAATTGCTTTCGAAATCTTTCTCGACAAGATAACGAGATGAT
CCTCCTGGAAATAGCACATAATTCTTTGGAGCTTGCCAAAGATAAAAATGGGTGTTGTATACTCCCATTTTGCATTCTATATGCTGAAGGGACACTTCGAGGAGTGTTGG
TGACTCCATTGATACAAGAAGCTCGTCATCTTTCAACACATTTTTATGCGAACTTTGTCATACAATTTTTGATTGAATTAGACCAAGCAAATATTGGAGCAAGAGTAATA
CAAGTGCTTAGGAACAAATTTGTGGAGCTTTGTTTAAGCAAGGCTGGGAGCCATGTGGTGGAGAAATGTTTGGGCTGTGGGGAGGATGAAGCTGCTGGAATTATCTTTGA
AATAATGGAGAATAAAGAGAATTGGATTCAAGTTTTTACAAATCAATATGGAAATTATGTTGCTCAGAAAGCATTGTCGGTTGCTAAGGGCACAGTGGGCTTAAATTTAA
GGGCACTTGGTCCTGCCCTTATAGGTGTGGATGTGGCTGTAGCAAGGGCAGTGGTGCCTGCCGTAAGCCCCAGCGCTGGGAACGCACTTGCATTTGCCGCAGCACAGTCT
GCAGTACTTCATGCACCGACGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATCAAACACCATTCCAGCTTCCAAACTACCTTACAAATGGCAATCGAATATTTACCAATCTTAACCCTTCTTCTTCAACCTCTTCCATCCAAGCTTTGGAAGC
TCAACTCGGCCGCTTACAGCTGTTGTCGTCGGTGGCAGCAGTCGACGTTTTCGATCACTCATGGCCGCCGTATTTCATGAGCAATCACGTGGATAGCCCCAACTTCTTTC
AGCCTCCCATGCACAATGGTGTACCAAATAACTTTGAAGCTGGAAGCTCGAGAATGTGGCGGTCGGGAGCGGGTGAGCCGTTCATCAGGCCGAGCAACGGAAATGTTTAT
GGGCATGGTAGAGGAATAAGGAGGATGGCCATGGATGGAGAAGGCTACCGAGTGGTGAAGAGAGTGATTGAAAGAGGGGATTTGAGAGAAACCCTAAACATTGTTGAAGG
AGTAAAGGATTGCATTCATGAACTAATGCTTCATCCATTGGGAAACGACGTCGTACAAACTCTCTTCCGATTCTGCCATGAATATTTCATAAAGGACCTTCTTCTCTCCT
TAATTGGAAAACAAGATCTCTTTCTAGCTGTTTGCCTTCACAGCCTCGGACAAAAAGCTGTGGTAAAATTGTTATGCCGTTTGAGCAACCCCCAACACCAGTTACTCTTT
GCAGTAGTGATCAGCCACCATGGCGTCGCCTTGGCAAAAAGCTCCGGTCCCGGCCACGACGTGCTCATAAATTGCTTTCGAAATCTTTCTCGACAAGATAACGAGATGAT
CCTCCTGGAAATAGCACATAATTCTTTGGAGCTTGCCAAAGATAAAAATGGGTGTTGTATACTCCCATTTTGCATTCTATATGCTGAAGGGACACTTCGAGGAGTGTTGG
TGACTCCATTGATACAAGAAGCTCGTCATCTTTCAACACATTTTTATGCGAACTTTGTCATACAATTTTTGATTGAATTAGACCAAGCAAATATTGGAGCAAGAGTAATA
CAAGTGCTTAGGAACAAATTTGTGGAGCTTTGTTTAAGCAAGGCTGGGAGCCATGTGGTGGAGAAATGTTTGGGCTGTGGGGAGGATGAAGCTGCTGGAATTATCTTTGA
AATAATGGAGAATAAAGAGAATTGGATTCAAGTTTTTACAAATCAATATGGAAATTATGTTGCTCAGAAAGCATTGTCGGTTGCTAAGGGCACAGTGGGCTTAAATTTAA
GGGCACTTGGTCCTGCCCTTATAGGTGTGGATGTGGCTGTAGCAAGGGCAGTGGTGCCTGCCGTAAGCCCCAGCGCTGGGAACGCACTTGCATTTGCCGCAGCACAGTCT
GCAGTACTTCATGCACCGACGCTTTAG
Protein sequenceShow/hide protein sequence
MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLLSSVAAVDVFDHSWPPYFMSNHVDSPNFFQPPMHNGVPNNFEAGSSRMWRSGAGEPFIRPSNGNVY
GHGRGIRRMAMDGEGYRVVKRVIERGDLRETLNIVEGVKDCIHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRLSNPQHQLLF
AVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCILYAEGTLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVI
QVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIMENKENWIQVFTNQYGNYVAQKALSVAKGTVGLNLRALGPALIGVDVAVARAVVPAVSPSAGNALAFAAAQS
AVLHAPTL