; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g07410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g07410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionclassical arabinogalactan protein 9-like
Genome locationchr4:5240539..5241740
RNA-Seq ExpressionMoc04g07410
SyntenyMoc04g07410
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645846.1 hypothetical protein Csa_017309 [Cucumis sativus]1.9e-4576.73Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP
        MD +ALL  +LI IA   A AQ+PSSPPTATP+PPTT    +TPPPVS+PPPA    ATPPPA+PP A+PPPASPPPA+PPPA+PPPASPPPA+PPPASP
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP

Query:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM
        PPATPPPAS PPPATPPPAPLASPP AVPAPAPSKKK K AAP+PSP+SSPPAP V APGP GP +SPTPSQNDNSG  KVWRKE +VGS++IGMGYV +
Subjt:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM

Query:  ML
        ML
Subjt:  ML

KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5379.07Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPP--TTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPAS---------------PPPASPPPA
        MD QAL  L+LI IA A A AQ PSSPPTATPAPP  TTTPPPATPPPVSAPPPATPPPATPPPA+PP ATPPPAS               PPPASPPPA
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPP--TTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPAS---------------PPPASPPPA

Query:  TPPPASPPPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEM
        TPPPASPPPATPPPASPPPATPPPA+PPPATPPPAPLASPP AVPAPAPSKKK KAAP P+P+SSPP P    PGP GPESPTPSQNDNSG  K WRKE 
Subjt:  TPPPASPPPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEM

Query:  VVGSMLIGMGYVLMM
        +VGSMLIGMGYVLMM
Subjt:  VVGSMLIGMGYVLMM

XP_004136948.3 classical arabinogalactan protein 9 [Cucumis sativus]1.9e-4576.73Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP
        MD +ALL  +LI IA   A AQ+PSSPPTATP+PPTT    +TPPPVS+PPPA    ATPPPA+PP A+PPPASPPPA+PPPA+PPPASPPPA+PPPASP
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP

Query:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM
        PPATPPPAS PPPATPPPAPLASPP AVPAPAPSKKK K AAP+PSP+SSPPAP V APGP GP +SPTPSQNDNSG  KVWRKE +VGS++IGMGYV +
Subjt:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM

Query:  ML
        ML
Subjt:  ML

XP_022952421.1 classical arabinogalactan protein 9-like [Cucurbita moschata]1.5e-5078.85Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-PPPATPPPVSAPPPAT---------PPPATPPPATPPAATPPPASPPPASPPPATPPPASP
        MD QAL   +LI +A A A AQ PSSPPTA   P TTT PPPATPPPVSAPPPAT         PPPATPPPA+PP ATPPPASPPPASPPPATPPPASP
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-PPPATPPPVSAPPPAT---------PPPATPPPATPPAATPPPASPPPASPPPATPPPASP

Query:  PPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLI
        PPATPPPASPPPATPPPA+PPPATPPPAPLASPP AVPAPAPSKKK KAAP P+P+SSPP P    PGP GPESPTPSQNDNSG  K WRKE +VGSMLI
Subjt:  PPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLI

Query:  GMGYVLMM
        GMGYVLMM
Subjt:  GMGYVLMM

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]2.8e-5280.98Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA
        MD QAL   +LI IA A A AQ PSSPPTAT APPTTT  PPPATPPPVS+PPPATPPPA+PPPATPP A+PPPA+PPPASPPPATPPPASPPPATPPPA
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA

Query:  SPPPATPPPASPPPATPPPA-----PLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLIGMG
        SPPPATPPPASPPPATPPPA     PLASPP AVPAPAPSKKK KAAP P+P+SSPP P    PGP GPESPTPSQNDNSG  K WRKE +VGSMLIGMG
Subjt:  SPPPATPPPASPPPATPPPA-----PLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLIGMG

Query:  YVLMM
        YVLMM
Subjt:  YVLMM

TrEMBL top hitse value%identityAlignment
A0A0A0K6D8 Uncharacterized protein9.3e-4676.73Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP
        MD +ALL  +LI IA   A AQ+PSSPPTATP+PPTT    +TPPPVS+PPPA    ATPPPA+PP A+PPPASPPPA+PPPA+PPPASPPPA+PPPASP
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASP

Query:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM
        PPATPPPAS PPPATPPPAPLASPP AVPAPAPSKKK K AAP+PSP+SSPPAP V APGP GP +SPTPSQNDNSG  KVWRKE +VGS++IGMGYV +
Subjt:  PPATPPPAS-PPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLM

Query:  ML
        ML
Subjt:  ML

A0A1S3BZW9 classical arabinogalactan protein 91.3e-4476.85Show/hide
Query:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPP-ATPPP-ATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA
        R  LL  + I IA A A AQ+PSSPPTATP+PPTT+  PP +TPPPVS+PPP ATPPP ATPPPA+PP A+PPPASPPPA+PPPA+PPPASPPPA+PPPA
Subjt:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPP-ATPPP-ATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA

Query:  SPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVL
        SPPPA+PPPASPPPA PPPAPLASPP AVPAPAPSKKK K AAP P+P+SSPPAP V APGP GP +SPTPSQNDNSG  KVWRKE +VGS++IGMGYV 
Subjt:  SPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVL

Query:  MML
        +ML
Subjt:  MML

A0A2C9VIZ5 Uncharacterized protein2.5e-3565.32Show/hide
Query:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-------------PPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPAS----------
        ++A +F+SLICI +AGA AQ+P +PPT TPAPPTTT             PPPATPPPVS PPPATPPPA+PPPATPP ATPPPASPPPAS          
Subjt:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-------------PPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPAS----------

Query:  PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLS-SPPAPPVGAPGPT-GPESPTPSQNDNSGAGK
        PPPATPPPASPPPATPPPASPPPATPPPA+PPPATPPPAPLA+PP  VPAPAPSKKK K APAP+PL  SPPAPP GAP P+ G  SP P+  D SGA +
Subjt:  PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLS-SPPAPPVGAPGPT-GPESPTPSQNDNSGAGK

Query:  VWRKEMVVGSMLIGMGYVLMML
        +     + GS++ G    L +L
Subjt:  VWRKEMVVGSMLIGMGYVLMML

A0A5A7SJX5 Classical arabinogalactan protein 91.3e-4476.85Show/hide
Query:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPP-ATPPP-ATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA
        R  LL  + I IA A A AQ+PSSPPTATP+PPTT+  PP +TPPPVS+PPP ATPPP ATPPPA+PP A+PPPASPPPA+PPPA+PPPASPPPA+PPPA
Subjt:  RQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT--PPPATPPPVSAPPP-ATPPP-ATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPA

Query:  SPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVL
        SPPPA+PPPASPPPA PPPAPLASPP AVPAPAPSKKK K AAP P+P+SSPPAP V APGP GP +SPTPSQNDNSG  KVWRKE +VGS++IGMGYV 
Subjt:  SPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSK-AAPAPSPLSSPPAPPVGAPGPTGP-ESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVL

Query:  MML
        +ML
Subjt:  MML

A0A6J1GK65 classical arabinogalactan protein 9-like7.4e-5178.85Show/hide
Query:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-PPPATPPPVSAPPPAT---------PPPATPPPATPPAATPPPASPPPASPPPATPPPASP
        MD QAL   +LI +A A A AQ PSSPPTA   P TTT PPPATPPPVSAPPPAT         PPPATPPPA+PP ATPPPASPPPASPPPATPPPASP
Subjt:  MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTT-PPPATPPPVSAPPPAT---------PPPATPPPATPPAATPPPASPPPASPPPATPPPASP

Query:  PPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLI
        PPATPPPASPPPATPPPA+PPPATPPPAPLASPP AVPAPAPSKKK KAAP P+P+SSPP P    PGP GPESPTPSQNDNSG  K WRKE +VGSMLI
Subjt:  PPATPPPASPPPATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLI

Query:  GMGYVLMM
        GMGYVLMM
Subjt:  GMGYVLMM

SwissProt top hitse value%identityAlignment
Q9C5S0 Classical arabinogalactan protein 94.2e-1963.21Show/hide
Query:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP
        +++ICI  +AG   QAP+SPPTATPAPPT TTPPP ATPPPVSAPPP T  PPP T  PPPA PP   PP +SPPPASPPPATPPP + PP  PP ASPP
Subjt:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP

Query:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQ---NDNSGAGKVWRKEMVVGSMLI
        PATPPP     ATPPPAPLASPP  VPAPAP+ K    +P+PSP SSPP P   APGP T   SP PS    ND +GA K+    +V GS+L+
Subjt:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQ---NDNSGAGKVWRKEMVVGSMLI

Arabidopsis top hitse value%identityAlignment
AT2G14890.1 arabinogalactan protein 93.0e-2063.21Show/hide
Query:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP
        +++ICI  +AG   QAP+SPPTATPAPPT TTPPP ATPPPVSAPPP T  PPP T  PPPA PP   PP +SPPPASPPPATPPP + PP  PP ASPP
Subjt:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP

Query:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQ---NDNSGAGKVWRKEMVVGSMLI
        PATPPP     ATPPPAPLASPP  VPAPAP+ K    +P+PSP SSPP P   APGP T   SP PS    ND +GA K+    +V GS+L+
Subjt:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQ---NDNSGAGKVWRKEMVVGSMLI

AT2G14890.2 arabinogalactan protein 91.6e-1866.67Show/hide
Query:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP
        +++ICI  +AG   QAP+SPPTATPAPPT TTPPP ATPPPVSAPPP T  PPP T  PPPA PP   PP +SPPPASPPPATPPP + PP  PP ASPP
Subjt:  LSLICIA-VAGAEAQAPSSPPTATPAPPT-TTPPP-ATPPPVSAPPPAT--PPPAT--PPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPP

Query:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQND
        PATPPP     ATPPPAPLASPP  VPAPAP+ K    +P+PSP SSPP P   APGP T   SP PS  D
Subjt:  PATPPPASPPPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGP-TGPESPTPSQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTCAGGCTTTGTTGTTTTTGAGTTTGATCTGCATTGCCGTCGCCGGCGCCGAAGCTCAGGCCCCCTCCAGTCCACCCACCGCCACCCCCGCTCCTCCCACTAC
CACCCCTCCTCCGGCCACCCCTCCCCCTGTTTCAGCTCCCCCTCCGGCCACTCCTCCTCCGGCTACTCCTCCTCCGGCTACTCCTCCTGCGGCCACCCCACCACCTGCTT
CTCCTCCACCGGCCAGCCCTCCTCCTGCAACTCCTCCACCGGCTAGTCCTCCACCGGCAACCCCACCTCCGGCGAGTCCTCCTCCGGCGACCCCGCCTCCGGCTAGTCCT
CCACCGGCTACCCCACCACCTGCGCCACTGGCCTCCCCCCCAGTGGCGGTTCCGGCTCCTGCACCCAGCAAGAAGAAGTCCAAGGCGGCTCCGGCTCCGTCGCCACTGTC
GAGCCCACCTGCGCCGCCTGTCGGAGCTCCGGGACCCACCGGACCGGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGCGGGAAAAGTGTGGAGAAAGGAGATGG
TGGTGGGGAGCATGTTGATTGGAATGGGATATGTTTTGATGATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTCAGGCTTTGTTGTTTTTGAGTTTGATCTGCATTGCCGTCGCCGGCGCCGAAGCTCAGGCCCCCTCCAGTCCACCCACCGCCACCCCCGCTCCTCCCACTAC
CACCCCTCCTCCGGCCACCCCTCCCCCTGTTTCAGCTCCCCCTCCGGCCACTCCTCCTCCGGCTACTCCTCCTCCGGCTACTCCTCCTGCGGCCACCCCACCACCTGCTT
CTCCTCCACCGGCCAGCCCTCCTCCTGCAACTCCTCCACCGGCTAGTCCTCCACCGGCAACCCCACCTCCGGCGAGTCCTCCTCCGGCGACCCCGCCTCCGGCTAGTCCT
CCACCGGCTACCCCACCACCTGCGCCACTGGCCTCCCCCCCAGTGGCGGTTCCGGCTCCTGCACCCAGCAAGAAGAAGTCCAAGGCGGCTCCGGCTCCGTCGCCACTGTC
GAGCCCACCTGCGCCGCCTGTCGGAGCTCCGGGACCCACCGGACCGGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGCGGGAAAAGTGTGGAGAAAGGAGATGG
TGGTGGGGAGCATGTTGATTGGAATGGGATATGTTTTGATGATGCTTTAG
Protein sequenceShow/hide protein sequence
MDRQALLFLSLICIAVAGAEAQAPSSPPTATPAPPTTTPPPATPPPVSAPPPATPPPATPPPATPPAATPPPASPPPASPPPATPPPASPPPATPPPASPPPATPPPASP
PPATPPPAPLASPPVAVPAPAPSKKKSKAAPAPSPLSSPPAPPVGAPGPTGPESPTPSQNDNSGAGKVWRKEMVVGSMLIGMGYVLMML