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Moc04g07830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g07830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:5681717..5682538
RNA-Seq ExpressionMoc04g07830
SyntenyMoc04g07830
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017216818.1 PREDICTED: uncharacterized protein LOC108194379 [Daucus carota subsp. sativus]1.8e-0538.96Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHM
        M +L +E F+++GN   L LN++L+EE R ++QL + +YQ  VA+YYNAK+K    Q   +   +  A  PL++S +
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHM

XP_022146366.1 uncharacterized protein LOC111015594 [Momordica charantia]7.8e-0969.23Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        MPT  VE F E+ N+ ALL+NL+LLEEKR+ SQL LVEYQN +ARYYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]1.1e-0749.38Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHMLESN
        MPTL VE FD + N+ A LLNL+LLEEKR+ SQL L EYQN +ARYYN + +     VR     D+     +Q    LE N
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHMLESN

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]3.1e-0559.62Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        M T  VE F+E+ N+ ALL+NL+LL EKR+ SQL L EY N +A YYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]2.1e-0969.23Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        MPT  VE FDE+ N+ ALL+NL+LLEEKR+ SQL L EYQN +ARYYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

TrEMBL top hitse value%identityAlignment
A0A6J1CZ55 uncharacterized protein LOC1110155943.8e-0969.23Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        MPT  VE F E+ N+ ALL+NL+LLEEKR+ SQL LVEYQN +ARYYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

A0A6J1DS38 uncharacterized protein LOC1110230175.5e-0849.38Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHMLESN
        MPTL VE FD + N+ A LLNL+LLEEKR+ SQL L EYQN +ARYYN + +     VR     D+     +Q    LE N
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHMLESN

A0A6J1DUF4 uncharacterized protein LOC1110232031.5e-0559.62Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        M T  VE F+E+ N+ ALL+NL+LL EKR+ SQL L EY N +A YYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

A0A6J1DWM2 Ribonuclease H1.0e-0969.23Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        MPT  VE FDE+ N+ ALL+NL+LLEEKR+ SQL L EYQN +ARYYNA+VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

A0A7J0EYS5 Uncharacterized protein3.3e-0548.08Show/hide
Query:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK
        MP+     FD+ GN G L LNL+LL+EKR  ++LC   Y++ +A+YYN +VK
Subjt:  MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCCTTTGCGTCGAAACTTTTGACGAACGAGGCAACAACGGTGCACTATTGCTTAACCTCAACCTCCTCGAGGAGAAGCGAGCTCAGTCACAACTTTGCCTCGT
CGAGTACCAAAATCACGTGGCACGTTACTACAATGCTAAAGTCAAGACCCTAGGCGTTCAAGTTCGACCTGTCACTGACTTGGACGTCAGAGCGTTTTCTCCTTTGCAAG
TTTCTCACATGCTAGAGTCCAACTCATTTGTTGGGTCAACTTCTACTCGAGCCAAGGTTCGTAGATTTGGTCAAATTCTTGATCAAACATTTTCCATCAAGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACCCTTTGCGTCGAAACTTTTGACGAACGAGGCAACAACGGTGCACTATTGCTTAACCTCAACCTCCTCGAGGAGAAGCGAGCTCAGTCACAACTTTGCCTCGT
CGAGTACCAAAATCACGTGGCACGTTACTACAATGCTAAAGTCAAGACCCTAGGCGTTCAAGTTCGACCTGTCACTGACTTGGACGTCAGAGCGTTTTCTCCTTTGCAAG
TTTCTCACATGCTAGAGTCCAACTCATTTGTTGGGTCAACTTCTACTCGAGCCAAGGTTCGTAGATTTGGTCAAATTCTTGATCAAACATTTTCCATCAAGACATGA
Protein sequenceShow/hide protein sequence
MPTLCVETFDERGNNGALLLNLNLLEEKRAQSQLCLVEYQNHVARYYNAKVKTLGVQVRPVTDLDVRAFSPLQVSHMLESNSFVGSTSTRAKVRRFGQILDQTFSIKT