; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g08340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g08340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposable element Tf2
Genome locationchr4:6016267..6017529
RNA-Seq ExpressionMoc04g08340
SyntenyMoc04g08340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032923.1 polyprotein [Cucumis melo var. makuwa]9.3e-17573.63Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  +  A++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF L  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +SD ++   +  S ASVND  VD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA

Query:  VEDFDPYDGYDINDPYLDSQP
        + D+DPY G DINDP+LD+QP
Subjt:  VEDFDPYDGYDINDPYLDSQP

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]7.6e-17774.88Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN+  VD
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD

Query:  AVEDFDPYDGYDINDPYLDSQP
           D+DPY+G DINDP+LD+QP
Subjt:  AVEDFDPYDGYDINDPYLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.3e-17674.53Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVN--DDV
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN  DD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVN--DDV

Query:  VDAVEDFDPYDGYDINDPYLDSQP
             D+DPY+G DINDP+LD+QP
Subjt:  VDAVEDFDPYDGYDINDPYLDSQP

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.3e-17674.64Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEP+FDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN+  VD
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD

Query:  AVEDFDPYDGYDINDPYLDSQP
         + D+DPY+G DINDP+LD+QP
Subjt:  AVEDFDPYDGYDINDPYLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]2.5e-17573.63Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  +  A++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF L  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +SD ++   +  S ASVND  VD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA

Query:  VEDFDPYDGYDINDPYLDSQP
        + D+DPY+G DINDP+LD+QP
Subjt:  VEDFDPYDGYDINDPYLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein4.5e-17573.63Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  +  A++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF L  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +SD ++   +  S ASVND  VD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA

Query:  VEDFDPYDGYDINDPYLDSQP
        + D+DPY G DINDP+LD+QP
Subjt:  VEDFDPYDGYDINDPYLDSQP

A0A5A7UVN1 Retrotransposable element Tf23.7e-17774.88Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN+  VD
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD

Query:  AVEDFDPYDGYDINDPYLDSQP
           D+DPY+G DINDP+LD+QP
Subjt:  AVEDFDPYDGYDINDPYLDSQP

A0A5A7V6D1 Retrotransposable element Tf26.3e-17774.53Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVN--DDV
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN  DD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVN--DDV

Query:  VDAVEDFDPYDGYDINDPYLDSQP
             D+DPY+G DINDP+LD+QP
Subjt:  VDAVEDFDPYDGYDINDPYLDSQP

A0A5A7VIK9 Retrotransposable element Tf26.3e-17774.64Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  + AA++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEP+FDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF LQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +S D+D++  DV S ASVN+  VD
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQIS-DSDNVQTDVDSSASVNDDVVD

Query:  AVEDFDPYDGYDINDPYLDSQP
         + D+DPY+G DINDP+LD+QP
Subjt:  AVEDFDPYDGYDINDPYLDSQP

A0A5D3DW87 Polyprotein1.2e-17573.63Show/hide
Query:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+Q+E VSRR+QGS+QR L IQ+   SL P PS+ LLRP   TT N R  +  A++SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSL-PTPSSTLLRPRSNTTRN-RGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LP+DL KTRT+YE+ILVDSKSAEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF
        YRDY KAWYIVF L  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPS NF
Subjt:  YRDYMKAWYIVFLLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQ +TRQEDE+FLL KNAVMS+LAGA +Q +FNSV+N V V +SD ++   +  S ASVND  VD 
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDA

Query:  VEDFDPYDGYDINDPYLDSQP
        + D+DPY+G DINDP+LD+QP
Subjt:  VEDFDPYDGYDINDPYLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAAAATTATGCTATGGATATCCAGTATGAAACGGTATCCAGGCGTCAGCAAGGTTCTTCCCAGAGAGCCTTGATTATTCAAACAGGCCCTCCAAGCCTTCC
AACCCCTTCAAGCACGTTGTTACGCCCTCGCAGCAACACAACGAGGAACAGGGGCCCTGCTACGGCAGCCGCCGCTTCCAGACCAACGATTCCGAGGAACCCTTCCTCGT
TTTCTCAAATAGTTAGGCCAAAGGTTTTTCAGCCAAGGCCTCCAATCACTGGGTATTTCACCAAGACTACCCTAGTAGATTCAATTATTGAACCAGAGTTCGACGGACCT
TCAGTCCAAGAAGTCTGCAAGCAAATATTTCCTCAAGGCTTCAATTACCTACCAAAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAGTC
TGCAGAAATAACTCATGTCCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCGCATCCTTACCCCTTCCTCTTGGAAACAGGGTATGTTTG
TAGGGAAGAGACTGTCAGTAACCTTCCAACCGCAAACTTACAATTACCGCGACTACATGAAAGCGTGGTATATTGTCTTCTTGTTGCAAGGCTATAACCATTCCTGGTTT
GTGACATTCTGTAAGCAAGCTTACAAGTCTCACTTTCCGATTTGGTTTCAAACATGGTGGACTTACTTTGGACTCTCCGAAGAAATTTTTCCGGTAGAAGTTCAGAGATC
TTACCACCTATTCCAACAAAGTATCTATTCGTCTCCTCTCTCCAAGACGTTTAGATTCGCTTTGTATTTTCAAATACCATGGATCCTTTGCTGGAATTTCCAGCTAGGAC
CCAGTCGAAATTTTAAAGCGTTGAGCAAAGCTCTCCGCGTCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAAGATTGGTTAAAAACCAAC
GTTCATCTTCAAGTCGTGACAAGGCAAGAAGACGAAAGCTTCCTTCTGGCCAAAAATGCTGTCATGAGTTCACTTGCTGGAGCCGGATCTCAAGCCGACTTCAACTCGGT
CCTCAATACCGTCGCAGTTCAGATCTCTGATTCCGACAATGTCCAAACAGATGTAGATTCTTCCGCATCTGTCAACGATGATGTCGTAGATGCCGTAGAAGACTTCGATC
CCTACGATGGATATGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAAAATTATGCTATGGATATCCAGTATGAAACGGTATCCAGGCGTCAGCAAGGTTCTTCCCAGAGAGCCTTGATTATTCAAACAGGCCCTCCAAGCCTTCC
AACCCCTTCAAGCACGTTGTTACGCCCTCGCAGCAACACAACGAGGAACAGGGGCCCTGCTACGGCAGCCGCCGCTTCCAGACCAACGATTCCGAGGAACCCTTCCTCGT
TTTCTCAAATAGTTAGGCCAAAGGTTTTTCAGCCAAGGCCTCCAATCACTGGGTATTTCACCAAGACTACCCTAGTAGATTCAATTATTGAACCAGAGTTCGACGGACCT
TCAGTCCAAGAAGTCTGCAAGCAAATATTTCCTCAAGGCTTCAATTACCTACCAAAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAGTC
TGCAGAAATAACTCATGTCCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCGCATCCTTACCCCTTCCTCTTGGAAACAGGGTATGTTTG
TAGGGAAGAGACTGTCAGTAACCTTCCAACCGCAAACTTACAATTACCGCGACTACATGAAAGCGTGGTATATTGTCTTCTTGTTGCAAGGCTATAACCATTCCTGGTTT
GTGACATTCTGTAAGCAAGCTTACAAGTCTCACTTTCCGATTTGGTTTCAAACATGGTGGACTTACTTTGGACTCTCCGAAGAAATTTTTCCGGTAGAAGTTCAGAGATC
TTACCACCTATTCCAACAAAGTATCTATTCGTCTCCTCTCTCCAAGACGTTTAGATTCGCTTTGTATTTTCAAATACCATGGATCCTTTGCTGGAATTTCCAGCTAGGAC
CCAGTCGAAATTTTAAAGCGTTGAGCAAAGCTCTCCGCGTCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAAGATTGGTTAAAAACCAAC
GTTCATCTTCAAGTCGTGACAAGGCAAGAAGACGAAAGCTTCCTTCTGGCCAAAAATGCTGTCATGAGTTCACTTGCTGGAGCCGGATCTCAAGCCGACTTCAACTCGGT
CCTCAATACCGTCGCAGTTCAGATCTCTGATTCCGACAATGTCCAAACAGATGTAGATTCTTCCGCATCTGTCAACGATGATGTCGTAGATGCCGTAGAAGACTTCGATC
CCTACGATGGATATGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Protein sequenceShow/hide protein sequence
MSAENYAMDIQYETVSRRQQGSSQRALIIQTGPPSLPTPSSTLLRPRSNTTRNRGPATAAAASRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTLVDSIIEPEFDGP
SVQEVCKQIFPQGFNYLPKDLQKTRTYYEFILVDSKSAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYNYRDYMKAWYIVFLLQGYNHSWF
VTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSRNFKALSKALRVKWWEKFDYSYLESDKMKDWLKTN
VHLQVVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDSDNVQTDVDSSASVNDDVVDAVEDFDPYDGYDINDPYLDSQPS