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Moc04g09020 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09020
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr4:6663579..6675312
RNA-Seq ExpressionMoc04g09020
SyntenyMoc04g09020
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]2.3e-2182.43Show/hide
Query:  LNDLQLLHGNHSGLTDRTTLDKVVAMALRVRELINYLEIIGITTQYRILGSDESSLALVASDYYDYLVLAGAST
        LNDLQLL GNHSGL  RTT DKVVA+ALRVRELI+YLEIIGITTQ RILGSD SSLALVASDYYDY V A   T
Subjt:  LNDLQLLHGNHSGLTDRTTLDKVVAMALRVRELINYLEIIGITTQYRILGSDESSLALVASDYYDYLVLAGAST
TrEMBL top hitse value%identityAlignment
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein1.1e-2182.43Show/hide
Query:  LNDLQLLHGNHSGLTDRTTLDKVVAMALRVRELINYLEIIGITTQYRILGSDESSLALVASDYYDYLVLAGAST
        LNDLQLL GNHSGL  RTT DKVVA+ALRVRELI+YLEIIGITTQ RILGSD SSLALVASDYYDY V A   T
Subjt:  LNDLQLLHGNHSGLTDRTTLDKVVAMALRVRELINYLEIIGITTQYRILGSDESSLALVASDYYDYLVLAGAST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCGGGTCTTGGAGGTCGTCGGGATCTACAGTTGTCATGGGGCCGTGAAGAAGGTGTCCTGCCGGAGGCCCAAAGATCGTGGGTTACAGCAGGTCATCAATGTTG
TCGTGGGTCTGCTCCGCTCGTCGTGCGCCGCCACGAGGGAACGCAGCAGAGAAACTGGTACTTGCAAATCTGGGTCATTGCGGATCGCCGGAGTCATGGAGAATGCTTCG
ACCTCGACTTGGATCAGGTTCGATTTAACCAAATGATAAAATACGATGGACCTAGCTTTAACACAGGCTTCGACCTCGACTTGGATCAGGCACGGACAAGACTCCCGACC
AAGCTTCAACGGCTCTTTAAGGTAAGCGTGAATTACGACGTGCTGTCGTGGAGTTTGTTGAAATATGTGGCTAAGCAAGATACATCTAGGTCGGTTCAAACAAAGATTGG
GAATGAGACCAAAGGAGATCTTGGTTGGCTCGGCCATAACGGGCATCGACTGTTGAATGACCTACAGCTCCTGCATGGTAACCACAGTGGACTTACGGATCGTACCACTT
TGGATAAGGTGGTTGCAATGGCTCTACGGGTACGGGAGCTAATAAATTACCTTGAAATAATTGGGATAACAACTCAGTATAGGATATTGGGATCGGATGAAAGCTCTCTC
GCTTTAGTTGCCTCCGACTACTATGATTATCTGGTCCTTGCTGGTGCATCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTCGGGTCTTGGAGGTCGTCGGGATCTACAGTTGTCATGGGGCCGTGAAGAAGGTGTCCTGCCGGAGGCCCAAAGATCGTGGGTTACAGCAGGTCATCAATGTTG
TCGTGGGTCTGCTCCGCTCGTCGTGCGCCGCCACGAGGGAACGCAGCAGAGAAACTGGTACTTGCAAATCTGGGTCATTGCGGATCGCCGGAGTCATGGAGAATGCTTCG
ACCTCGACTTGGATCAGGTTCGATTTAACCAAATGATAAAATACGATGGACCTAGCTTTAACACAGGCTTCGACCTCGACTTGGATCAGGCACGGACAAGACTCCCGACC
AAGCTTCAACGGCTCTTTAAGGTAAGCGTGAATTACGACGTGCTGTCGTGGAGTTTGTTGAAATATGTGGCTAAGCAAGATACATCTAGGTCGGTTCAAACAAAGATTGG
GAATGAGACCAAAGGAGATCTTGGTTGGCTCGGCCATAACGGGCATCGACTGTTGAATGACCTACAGCTCCTGCATGGTAACCACAGTGGACTTACGGATCGTACCACTT
TGGATAAGGTGGTTGCAATGGCTCTACGGGTACGGGAGCTAATAAATTACCTTGAAATAATTGGGATAACAACTCAGTATAGGATATTGGGATCGGATGAAAGCTCTCTC
GCTTTAGTTGCCTCCGACTACTATGATTATCTGGTCCTTGCTGGTGCATCCACTTGA
Protein sequenceShow/hide protein sequence
MPSGLGGRRDLQLSWGREEGVLPEAQRSWVTAGHQCCRGSAPLVVRRHEGTQQRNWYLQIWVIADRRSHGECFDLDLDQVRFNQMIKYDGPSFNTGFDLDLDQARTRLPT
KLQRLFKVSVNYDVLSWSLLKYVAKQDTSRSVQTKIGNETKGDLGWLGHNGHRLLNDLQLLHGNHSGLTDRTTLDKVVAMALRVRELINYLEIIGITTQYRILGSDESSL
ALVASDYYDYLVLAGAST