; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g09170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:6751454..6752335
RNA-Seq ExpressionMoc04g09170
SyntenyMoc04g09170
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.5e-5041.37Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH
        MAA +L++ WKN +LT++E+++ VD+D  A E TGK + LSL+ KL+                                         ++ RNR+ ++G 
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH

Query:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW
        W FD+ L++++ P  + KP ++ F  VSLW+HF++L   C NKTM  RL NA+G FE+V+ N   +C G  LRVRV +D+ K L RGIKLNLDGP+GG W
Subjt:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW

Query:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQG
        IP++YERLP+F  + G L H +KDC +     D  SKN Q+  WLR+QG
Subjt:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.3e-4337.07Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLMANH----------------------------------------RNRVFKIGHW
        M  E+L+  W+  +LT++E+E+ +DVD  A +   + +  SL+GKL+A                                           NRV K G W
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLMANH----------------------------------------RNRVFKIGHW

Query:  IFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFWI
         FDK L+VL++P       EL F++V+ WIH ++L     NKTM IRL NA+G+F +VDCN+  +  G  LR+RV  DI+K LRRGIK+N+DGP+GG WI
Subjt:  IFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFWI

Query:  PMKYERLPEFYSYRGMLGHHVKDCD-NFFESKDGDSKNEQFELWLRYQGPQRKPSKTQK
        P++YERLP+F  + G++GH   DCD  +  ++D      ++  WLR+ G +    K +K
Subjt:  PMKYERLPEFYSYRGMLGHHVKDCD-NFFESKDGDSKNEQFELWLRYQGPQRKPSKTQK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.9e-4237.37Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH
        MA  DL++ WKN +LT++EEE  +DVD  A   TG  +   L+GKL                                          A  RN+++K G 
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH

Query:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW
        W FD+ L+++ +P  ++ P EL F K+ +W+ F++L  GC  + M IRL NA+G FEE DC+      G  LRVRV  DISK LRRGIKLNLDGPIGG W
Subjt:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW

Query:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQGPQRKPSKTQKQMWLDDRQD--GNEDIF-----LGGGTDG--STPVTVP
        IP++YERLP+F  + G+                   K  Q+  WLRYQG   KP+  Q +   +D  D  GN         +G G+ G  S P T P
Subjt:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQGPQRKPSKTQKQMWLDDRQD--GNEDIF-----LGGGTDG--STPVTVP

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.9e-2237.5Show/hide
Query:  RNRVFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLN
        + RV   G W FDK+LL+L + +  V+P ++   +V  W+H  NL     NK +   + NAVG F ++D   G    G  +R+RV  D+ K LRRG+KL 
Subjt:  RNRVFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLN

Query:  LDG--PIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNE-QFELWLRYQGPQRKPSK
        L    PI   W+  KYERLP +  + G LGH  ++CD+   S DG   +  Q+  WLR    + K S+
Subjt:  LDG--PIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNE-QFELWLRYQGPQRKPSK

XP_030930480.1 uncharacterized protein LOC115956164 [Quercus lobata]3.8e-2239.29Show/hide
Query:  NRVFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNL
        +RV  +  W+FDKYLLVL +        ++ FD+   WI  + L   C+ KT+ + +   +G  E+VD N   +C G  LR+RV  DI+K L RG K+ L
Subjt:  NRVFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNL

Query:  DGPIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNE-QFELWLRYQGPQRKPSKTQK
         G  G  W+  KYERLP F    GM+ H  +DC   F SK+     E QF  WLR       P K QK
Subjt:  DGPIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNE-QFELWLRYQGPQRKPSKTQK

TrEMBL top hitse value%identityAlignment
A0A2K3MPT1 Cysteine desulfurase mitochondrial-like1.2e-2138.51Show/hide
Query:  VFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEV---DCNKGKYCCGEILRVRVCYDISKALRRGIKLN
        V+K G W FD+ LL+L + +   +P EL  D+VS W+  Y+L    R++ M  +L N +G+FEE+   DCN+     G+ LR+RV  D+ K L+RG KL+
Subjt:  VFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEV---DCNKGKYCCGEILRVRVCYDISKALRRGIKLN

Query:  LDGPIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDS------KNEQFELWLR
          G     W+  KYERLP F    G +GH ++DC+   +  D D+      K++ F  WLR
Subjt:  LDGPIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDS------KNEQFELWLR

A0A2Z6LV25 Uncharacterized protein (Fragment)2.0e-2137.58Show/hide
Query:  VFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDG
        V K G W FD+ LL+L + +   +P EL  D VS W+  Y+L    R++ +  +L N VG+FEE+D  +     G+ LR+RV  D+ K L+RG KLN  G
Subjt:  VFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDG

Query:  PIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNF-----FESKDGDSKNEQFELWLR
             W+  KYERLP F    G +GH ++DC++       +  + + K + F  WLR
Subjt:  PIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNF-----FESKDGDSKNEQFELWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-5041.37Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH
        MAA +L++ WKN +LT++E+++ VD+D  A E TGK + LSL+ KL+                                         ++ RNR+ ++G 
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH

Query:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW
        W FD+ L++++ P  + KP ++ F  VSLW+HF++L   C NKTM  RL NA+G FE+V+ N   +C G  LRVRV +D+ K L RGIKLNLDGP+GG W
Subjt:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW

Query:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQG
        IP++YERLP+F  + G L H +KDC +     D  SKN Q+  WLR+QG
Subjt:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQG

A0A6J1DU55 uncharacterized protein LOC1110231351.1e-4337.07Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLMANH----------------------------------------RNRVFKIGHW
        M  E+L+  W+  +LT++E+E+ +DVD  A +   + +  SL+GKL+A                                           NRV K G W
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLMANH----------------------------------------RNRVFKIGHW

Query:  IFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFWI
         FDK L+VL++P       EL F++V+ WIH ++L     NKTM IRL NA+G+F +VDCN+  +  G  LR+RV  DI+K LRRGIK+N+DGP+GG WI
Subjt:  IFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFWI

Query:  PMKYERLPEFYSYRGMLGHHVKDCD-NFFESKDGDSKNEQFELWLRYQGPQRKPSKTQK
        P++YERLP+F  + G++GH   DCD  +  ++D      ++  WLR+ G +    K +K
Subjt:  PMKYERLPEFYSYRGMLGHHVKDCD-NFFESKDGDSKNEQFELWLRYQGPQRKPSKTQK

A0A6J1DX30 uncharacterized protein LOC1110248749.4e-4337.37Show/hide
Query:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH
        MA  DL++ WKN +LT++EEE  +DVD  A   TG  +   L+GKL                                          A  RN+++K G 
Subjt:  MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLM-----------------------------------------ANHRNRVFKIGH

Query:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW
        W FD+ L+++ +P  ++ P EL F K+ +W+ F++L  GC  + M IRL NA+G FEE DC+      G  LRVRV  DISK LRRGIKLNLDGPIGG W
Subjt:  WIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRNAVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFW

Query:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQGPQRKPSKTQKQMWLDDRQD--GNEDIF-----LGGGTDG--STPVTVP
        IP++YERLP+F  + G+                   K  Q+  WLRYQG   KP+  Q +   +D  D  GN         +G G+ G  S P T P
Subjt:  IPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQGPQRKPSKTQKQMWLDDRQD--GNEDIF-----LGGGTDG--STPVTVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGAGGATCTCATAGACGGTTGGAAGAATCTGCGCCTAACAACGGATGAAGAAGAAGTTGTGGTGGATGTGGATAGACAAGCGGCAGAAGAAACTGGCAAGGC
TATGACCTTGAGTCTGTTGGGGAAACTGATGGCAAACCACCGAAATCGTGTGTTCAAGATAGGCCATTGGATCTTTGATAAGTACCTACTTGTTCTTGAACAACCAAACA
TGATGGTTAAGCCAGATGAATTGTGTTTTGATAAAGTTTCCTTATGGATACATTTCTACAATCTCCATCAAGGTTGTAGGAATAAAACCATGACAATTCGCCTGCGAAAT
GCTGTAGGTTCCTTTGAAGAGGTTGACTGCAACAAAGGGAAATACTGTTGTGGCGAGATCCTCAGAGTTCGTGTCTGTTATGATATTTCTAAGGCATTAAGAAGGGGAAT
TAAGTTGAACCTTGATGGACCTATCGGGGGTTTTTGGATTCCTATGAAGTATGAACGTCTCCCTGAGTTCTACTCTTATCGTGGAATGCTAGGCCATCATGTTAAAGACT
GTGATAATTTTTTTGAAAGTAAGGATGGGGATTCGAAGAATGAACAATTTGAGCTATGGTTACGTTACCAAGGCCCCCAAAGGAAACCCTCAAAGACACAGAAACAAATG
TGGTTGGATGATAGGCAAGACGGGAATGAGGATATCTTTCTCGGTGGTGGCACCGATGGTAGTACCCCGGTGACGGTGCCGGAAAAACAGCAGGACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGGAGGATCTCATAGACGGTTGGAAGAATCTGCGCCTAACAACGGATGAAGAAGAAGTTGTGGTGGATGTGGATAGACAAGCGGCAGAAGAAACTGGCAAGGC
TATGACCTTGAGTCTGTTGGGGAAACTGATGGCAAACCACCGAAATCGTGTGTTCAAGATAGGCCATTGGATCTTTGATAAGTACCTACTTGTTCTTGAACAACCAAACA
TGATGGTTAAGCCAGATGAATTGTGTTTTGATAAAGTTTCCTTATGGATACATTTCTACAATCTCCATCAAGGTTGTAGGAATAAAACCATGACAATTCGCCTGCGAAAT
GCTGTAGGTTCCTTTGAAGAGGTTGACTGCAACAAAGGGAAATACTGTTGTGGCGAGATCCTCAGAGTTCGTGTCTGTTATGATATTTCTAAGGCATTAAGAAGGGGAAT
TAAGTTGAACCTTGATGGACCTATCGGGGGTTTTTGGATTCCTATGAAGTATGAACGTCTCCCTGAGTTCTACTCTTATCGTGGAATGCTAGGCCATCATGTTAAAGACT
GTGATAATTTTTTTGAAAGTAAGGATGGGGATTCGAAGAATGAACAATTTGAGCTATGGTTACGTTACCAAGGCCCCCAAAGGAAACCCTCAAAGACACAGAAACAAATG
TGGTTGGATGATAGGCAAGACGGGAATGAGGATATCTTTCTCGGTGGTGGCACCGATGGTAGTACCCCGGTGACGGTGCCGGAAAAACAGCAGGACCTTTAG
Protein sequenceShow/hide protein sequence
MAAEDLIDGWKNLRLTTDEEEVVVDVDRQAAEETGKAMTLSLLGKLMANHRNRVFKIGHWIFDKYLLVLEQPNMMVKPDELCFDKVSLWIHFYNLHQGCRNKTMTIRLRN
AVGSFEEVDCNKGKYCCGEILRVRVCYDISKALRRGIKLNLDGPIGGFWIPMKYERLPEFYSYRGMLGHHVKDCDNFFESKDGDSKNEQFELWLRYQGPQRKPSKTQKQM
WLDDRQDGNEDIFLGGGTDGSTPVTVPEKQQDL