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Moc04g09280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionclassical arabinogalactan protein 1-like
Genome locationchr4:6855286..6855612
RNA-Seq ExpressionMoc04g09280
SyntenyMoc04g09280
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061155.1 classical arabinogalactan protein 1-like [Cucumis melo var. makuwa]1.1e-0549.11Show/hide
Query:  SVRFTVLALMALILITSAAAQSP-KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP-------PSSSPSPALPPSSISSPPADAPAAAGNTAASNS
        ++R  V  ++   LI SA AQSP +  S A S SP+  SP+ SP  AP+P++ K   + P       PSSSPSPA  PSSISSPPADAPA +GN AAS +
Subjt:  SVRFTVLALMALILITSAAAQSP-KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP-------PSSSPSPALPPSSISSPPADAPAAAGNTAASNS

Query:  FAVAGSLFAAAF
        F+V GS   A +
Subjt:  FAVAGSLFAAAF

KAG7030900.1 hypothetical protein SDJN02_04937, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-0650Show/hide
Query:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSP--SPALPPSSISSPPADAPAAAGNTAA
        ++R  V+ +M  +LI SA AQSP         K  S A S SP+ +SP+ SP +AP+PA+ K S   PP++SP  SP+  PSSISSPPADAPA +GN AA
Subjt:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSP--SPALPPSSISSPPADAPAAAGNTAA

Query:  SNSFAVAGSL
        S SF++ GS+
Subjt:  SNSFAVAGSL

PQQ16428.1 classical arabinogalactan protein 1 [Prunus yedoensis var. nudiflora]2.4e-0545.16Show/hide
Query:  MASVRFTVLALMALILITSAAAQSPKKH---------SHAASPSPAADSPRVSPK--SAPSPATGKHSLAGPPSSSP-SPALPPSSISSPPADAPAAAGN
        MA     VL LMA +L+ S  AQSP             HAA+PSP++  P+ SP   S P  A   HS   PPS+SP SPA+PPSS+S PP++APA A N
Subjt:  MASVRFTVLALMALILITSAAAQSPKKH---------SHAASPSPAADSPRVSPK--SAPSPATGKHSLAGPPSSSP-SPALPPSSISSPPADAPAAAGN

Query:  TAASNSFAVAG----SLFAAAFLM
         A  N F+ AG      FAA  +M
Subjt:  TAASNSFAVAG----SLFAAAFLM

XP_022141985.1 classical arabinogalactan protein 1-like [Momordica charantia]3.5e-41100Show/hide
Query:  MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS
        MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS
Subjt:  MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS

Query:  LFAAAFLM
        LFAAAFLM
Subjt:  LFAAAFLM

XP_023542663.1 classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]4.0e-0546.55Show/hide
Query:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP---PSSSPSPALPPSSISSPPADAPAAAGNTA
        ++R  V+ +M  +LI SA AQSP         K  S A S SP+ +SP+ SP +AP+PA+ +   + P   PS SPSP+  PSSISSPPADAPA +GN A
Subjt:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP---PSSSPSPALPPSSISSPPADAPAAAGNTA

Query:  ASNSFAVAGSLFAAAF
        AS S ++ GS+ A  +
Subjt:  ASNSFAVAGSLFAAAF

TrEMBL top hitse value%identityAlignment
A0A314ZGT3 Classical arabinogalactan protein 11.1e-0545.16Show/hide
Query:  MASVRFTVLALMALILITSAAAQSPKKH---------SHAASPSPAADSPRVSPK--SAPSPATGKHSLAGPPSSSP-SPALPPSSISSPPADAPAAAGN
        MA     VL LMA +L+ S  AQSP             HAA+PSP++  P+ SP   S P  A   HS   PPS+SP SPA+PPSS+S PP++APA A N
Subjt:  MASVRFTVLALMALILITSAAAQSPKKH---------SHAASPSPAADSPRVSPK--SAPSPATGKHSLAGPPSSSP-SPALPPSSISSPPADAPAAAGN

Query:  TAASNSFAVAG----SLFAAAFLM
         A  N F+ AG      FAA  +M
Subjt:  TAASNSFAVAG----SLFAAAFLM

A0A5A7V5Q9 Classical arabinogalactan protein 1-like5.1e-0649.11Show/hide
Query:  SVRFTVLALMALILITSAAAQSP-KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP-------PSSSPSPALPPSSISSPPADAPAAAGNTAASNS
        ++R  V  ++   LI SA AQSP +  S A S SP+  SP+ SP  AP+P++ K   + P       PSSSPSPA  PSSISSPPADAPA +GN AAS +
Subjt:  SVRFTVLALMALILITSAAAQSP-KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGP-------PSSSPSPALPPSSISSPPADAPAAAGNTAASNS

Query:  FAVAGSLFAAAF
        F+V GS   A +
Subjt:  FAVAGSLFAAAF

A0A6J1CJM5 classical arabinogalactan protein 1-like1.7e-41100Show/hide
Query:  MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS
        MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS
Subjt:  MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGS

Query:  LFAAAFLM
        LFAAAFLM
Subjt:  LFAAAFLM

A0A6J1E9Q3 classical arabinogalactan protein 1-like3.3e-0552.73Show/hide
Query:  MASVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAA
        MA   F V+ L+AL LI SA AQSP         K  S A S SP+  SP+ SP +AP+PA+        PS+SPSPA  PSSISSPPADAPA +G+ AA
Subjt:  MASVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAA

Query:  SNSFAVAGSL
        S SF+V GS+
Subjt:  SNSFAVAGSL

A0A6J1FW49 classical arabinogalactan protein 1-like1.9e-0549.09Show/hide
Query:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSP--SPALPPSSISSPPADAPAAAGNTAA
        ++R  V+ +   +LI SA AQSP         K  S A S SP+ +SP+ SP +AP+PA+ K S   PP++SP  SP+  PSSISSPPADAPA +GN AA
Subjt:  SVRFTVLALMALILITSAAAQSP---------KKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSP--SPALPPSSISSPPADAPAAAGNTAA

Query:  SNSFAVAGSL
        S SF++ GS+
Subjt:  SNSFAVAGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTACGATTTACAGTCCTTGCCCTAATGGCGCTCATACTGATAACCTCCGCCGCCGCTCAGTCTCCGAAGAAACATTCGCACGCCGCTTCTCCTTCGCCGGC
CGCCGATTCGCCTAGGGTTTCGCCGAAATCCGCGCCGTCGCCGGCCACCGGTAAGCATTCTCTCGCTGGTCCGCCTTCGTCTTCTCCGTCACCGGCCCTCCCTCCATCCT
CCATCTCCTCCCCTCCCGCCGATGCTCCGGCTGCTGCCGGAAACACTGCTGCTTCCAATTCTTTCGCCGTCGCCGGTTCTCTCTTCGCCGCGGCTTTCCTCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGTACGATTTACAGTCCTTGCCCTAATGGCGCTCATACTGATAACCTCCGCCGCCGCTCAGTCTCCGAAGAAACATTCGCACGCCGCTTCTCCTTCGCCGGC
CGCCGATTCGCCTAGGGTTTCGCCGAAATCCGCGCCGTCGCCGGCCACCGGTAAGCATTCTCTCGCTGGTCCGCCTTCGTCTTCTCCGTCACCGGCCCTCCCTCCATCCT
CCATCTCCTCCCCTCCCGCCGATGCTCCGGCTGCTGCCGGAAACACTGCTGCTTCCAATTCTTTCGCCGTCGCCGGTTCTCTCTTCGCCGCGGCTTTCCTCATGTAG
Protein sequenceShow/hide protein sequence
MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGSLFAAAFLM