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Moc04g09290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionextensin-like
Genome locationchr4:6861650..6864497
RNA-Seq ExpressionMoc04g09290
SyntenyMoc04g09290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659717.1 vegetative cell wall protein gp1 [Cucumis sativus]6.9e-1053.17Show/hide
Query:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH
        A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA P SP                 +P+P+WIA PP++AL+PSK 
Subjt:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH

Query:  KSNALKNRFSLVGSVGIGAMAAAALL
        KS+  KN FS+VGSV IGAMAAAALL
Subjt:  KSNALKNRFSLVGSVGIGAMAAAALL

XP_022141995.1 extensin-like [Momordica charantia]8.0e-5199.2Show/hide
Query:  MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN
        MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN
Subjt:  MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN

Query:  ALKNRFSLVGSVGIGAMAAAALLIL
        ALKNRFSLVGSVGIGAMAAAALLI+
Subjt:  ALKNRFSLVGSVGIGAMAAAALLIL

XP_038887113.1 anther-specific proline-rich protein APG-like [Benincasa hispida]4.0e-1056.35Show/hide
Query:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPT-PPSSPAPSPSPTTAVVPP---APPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH
        A+PSPPWRWTP  K   PP SS+P+   +PT PPSSP P+PSP T V+PP     PT  PVS P Q        +P P+ +P+PSWIA PP +A APSK 
Subjt:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPT-PPSSPAPSPSPTTAVVPP---APPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH

Query:  KSNALKNRFSLVGSVGIGAMAAAALL
        KS+A  NRFS+V SV I AMAAA LL
Subjt:  KSNALKNRFSLVGSVGIGAMAAAALL

TrEMBL top hitse value%identityAlignment
A0A0A0K238 Uncharacterized protein3.3e-1053.17Show/hide
Query:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH
        A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA P SP                 +P+P+WIA PP++AL+PSK 
Subjt:  ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKH

Query:  KSNALKNRFSLVGSVGIGAMAAAALL
        KS+  KN FS+VGSV IGAMAAAALL
Subjt:  KSNALKNRFSLVGSVGIGAMAAAALL

A0A6J1CJN4 extensin-like3.9e-5199.2Show/hide
Query:  MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN
        MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN
Subjt:  MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSN

Query:  ALKNRFSLVGSVGIGAMAAAALLIL
        ALKNRFSLVGSVGIGAMAAAALLI+
Subjt:  ALKNRFSLVGSVGIGAMAAAALLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCTTCACCGCCCTGGAGATGGACCCCCAATCCAAAGCCTCCCACACCTCCGACGTCGTCGTCTCCGGCACCGTCTCCACAGCCCACTCCGCCGTCGTCTCC
GGCACCGTCTCCATCTCCGACGACAGCCGTGGTCCCGCCGGCACCGCCAACTGCAGCCCCGGTTTCCCCACCACCGCAGACTCAGAGCCCTGCTCCGCCGGTGACTCCGC
CGCCCGCTCAGGCTCCGGCTCCGTCGTGGATCGCCGGTCCGCCGGCAGACGCACTGGCGCCGTCGAAACATAAGAGCAACGCCTTAAAAAACCGATTCTCGCTGGTCGGA
TCAGTGGGCATTGGAGCCATGGCTGCTGCTGCTTTATTAATATTGAAATGCAAAGAAGTTAACCGGCACAATTCCTTAATTTCTCAAAAAGGCTTCCAAATTGAACAAGA
AAATGAGAAGGAGAAAGATGAGGAACATTTCCACCATGATAGACCTCAAGAAAGCAAAAACAATGGGTTCTTGGTTCAAGATTTCGATTTTTCCAGCAAAGAAGAAGAAT
TTTGCGGTGGTTTTGTAGATTATTTCTATCATATTGATCAAGAAGATTCTGATAAGAGTGCAAAGATGGAAGGAGATGAAAGAAGCTTGAAGCAAGAATATACCACAATA
TACCACAAAGTCTTTCCTTCACAGAAGACTTCAAGAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCCCTTCACCGCCCTGGAGATGGACCCCCAATCCAAAGCCTCCCACACCTCCGACGTCGTCGTCTCCGGCACCGTCTCCACAGCCCACTCCGCCGTCGTCTCC
GGCACCGTCTCCATCTCCGACGACAGCCGTGGTCCCGCCGGCACCGCCAACTGCAGCCCCGGTTTCCCCACCACCGCAGACTCAGAGCCCTGCTCCGCCGGTGACTCCGC
CGCCCGCTCAGGCTCCGGCTCCGTCGTGGATCGCCGGTCCGCCGGCAGACGCACTGGCGCCGTCGAAACATAAGAGCAACGCCTTAAAAAACCGATTCTCGCTGGTCGGA
TCAGTGGGCATTGGAGCCATGGCTGCTGCTGCTTTATTAATATTGAAATGCAAAGAAGTTAACCGGCACAATTCCTTAATTTCTCAAAAAGGCTTCCAAATTGAACAAGA
AAATGAGAAGGAGAAAGATGAGGAACATTTCCACCATGATAGACCTCAAGAAAGCAAAAACAATGGGTTCTTGGTTCAAGATTTCGATTTTTCCAGCAAAGAAGAAGAAT
TTTGCGGTGGTTTTGTAGATTATTTCTATCATATTGATCAAGAAGATTCTGATAAGAGTGCAAAGATGGAAGGAGATGAAAGAAGCTTGAAGCAAGAATATACCACAATA
TACCACAAAGTCTTTCCTTCACAGAAGACTTCAAGAATGTAG
Protein sequenceShow/hide protein sequence
MATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVG
SVGIGAMAAAALLILKCKEVNRHNSLISQKGFQIEQENEKEKDEEHFHHDRPQESKNNGFLVQDFDFSSKEEEFCGGFVDYFYHIDQEDSDKSAKMEGDERSLKQEYTTI
YHKVFPSQKTSRM