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Moc04g09410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr4:6933730..6938232
RNA-Seq ExpressionMoc04g09410
SyntenyMoc04g09410
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144033.1 uncharacterized protein LOC111013825 [Momordica charantia]1.7e-2131.58Show/hide
Query:  PLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKG---------------QARSCGSGEFYDSPRHKD------STEDHLVVFV
        P+PPK K P M  YDGS+DP D++E+ E LM   AA D +KC AF + L G               Q +     E+    + K       S +  +  F+
Subjt:  PLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKG---------------QARSCGSGEFYDSPRHKD------STEDHLVVFV

Query:  GVLLEEVFFKALDRH---FMYELRAKVHKL--------EKLIQVWKRKTKYEKSVEPREESMK-------------------HVQVKADESWS-------
          L +E     L+        E+  K  K          KL  +  R T+   S E R+   K                    V+ K +   S       
Subjt:  GVLLEEVFFKALDRH---FMYELRAKVHKL--------EKLIQVWKRKTKYEKSVEPREESMK-------------------HVQVKADESWS-------

Query:  ---------------------------EVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWER
                                   E + E  II + R  +++ F   D+E VH PHNDALVIAP ID+V V++VLVDGGAS +ILSL TYL LGW R
Subjt:  ---------------------------EVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWER

Query:  SQLK
        SQLK
Subjt:  SQLK

XP_022150318.1 uncharacterized protein LOC111018515 [Momordica charantia]3.5e-1987.93Show/hide
Query:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQARS
        MAYPLP KMKKP MK YDGS DPIDHI LYEGLMELNA GDEMKC+AFSVTLKGQARS
Subjt:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQARS

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.7e-1851.85Show/hide
Query:  VWKRKTKYEKSVEPREESMKHVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLAL
        V K++ +      PR +    V  K  E   E + E  II + RP +++AF   D+E VH PHNDALVIAP ID V V+++LVDGGAS +ILSL+TYLAL
Subjt:  VWKRKTKYEKSVEPREESMKHVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLAL

Query:  GWERSQLK
        GW RSQLK
Subjt:  GWERSQLK

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.4e-0754.72Show/hide
Query:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR
        +PPK K P MK YDGS+DP D++E++E LM+  AA D +KC AF + L G AR
Subjt:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]5.7e-2230.99Show/hide
Query:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR-----------SCGS-------GEFYDSPRHKD----------
        M  P+PPK K P MK YDGS+DP D++E++EGLM+  AA D +KC AF + L G AR           S  S       G+F  S RH D          
Subjt:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR-----------SCGS-------GEFYDSPRHKD----------

Query:  --STEDHLVVFVGVLLEEVFFKALDR-----HFMYELRAKVHKLEKLI--------------------------------------------QVWKRKTK
            ++ L V +G      F + L            LR K  + EK I                                            + W+ K +
Subjt:  --STEDHLVVFVGVLLEEVFFKALDR-----HFMYELRAKVHKLEKLI--------------------------------------------QVWKRKTK

Query:  YE-----------------KSVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDA
         E                  SVE +EE  +                          + K  E   E + +  II + +P  ++ F   D+E VH PHNDA
Subjt:  YE-----------------KSVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDA

Query:  LVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK
        LVIAP ID+V V++VLVDGGAS +ILSL TYLAL   RSQLK
Subjt:  LVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.8e-2031.34Show/hide
Query:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR--------------SCGSGEFYDS--PRHKD-STEDHLVVF---VGV
        +PPK K P MKSYDGS+DP D++E++EGLM+  AA D +KCRAF + L G AR              S    EF      RH D  T  HL       G 
Subjt:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR--------------SCGSGEFYDS--PRHKD-STEDHLVVF---VGV

Query:  LLEEVFFK---------------------------------------------ALDRHFM---YELRAKVHKLEKLIQVWKRKTKYEK------------
         L+E   +                                              +++ F+     LR K  + EK  Q+ ++K+  +K            
Subjt:  LLEEVFFK---------------------------------------------ALDRHFM---YELRAKVHKLEKLIQVWKRKTKYEK------------

Query:  -------------SVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFI
                     SVE +EE  +                            K  E   E   E  II + RP  ++ F   D+E VH P+NDALVIAP I
Subjt:  -------------SVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFI

Query:  DNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK
        D+V V++VLVDGGAS +ILS    LALGW RSQLK
Subjt:  DNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK

TrEMBL top hitse value%identityAlignment
A0A6J1CS66 uncharacterized protein LOC1110138258.0e-2231.58Show/hide
Query:  PLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKG---------------QARSCGSGEFYDSPRHKD------STEDHLVVFV
        P+PPK K P M  YDGS+DP D++E+ E LM   AA D +KC AF + L G               Q +     E+    + K       S +  +  F+
Subjt:  PLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKG---------------QARSCGSGEFYDSPRHKD------STEDHLVVFV

Query:  GVLLEEVFFKALDRH---FMYELRAKVHKL--------EKLIQVWKRKTKYEKSVEPREESMK-------------------HVQVKADESWS-------
          L +E     L+        E+  K  K          KL  +  R T+   S E R+   K                    V+ K +   S       
Subjt:  GVLLEEVFFKALDRH---FMYELRAKVHKL--------EKLIQVWKRKTKYEKSVEPREESMK-------------------HVQVKADESWS-------

Query:  ---------------------------EVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWER
                                   E + E  II + R  +++ F   D+E VH PHNDALVIAP ID+V V++VLVDGGAS +ILSL TYL LGW R
Subjt:  ---------------------------EVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWER

Query:  SQLK
        SQLK
Subjt:  SQLK

A0A6J1D949 uncharacterized protein LOC1110185151.7e-1987.93Show/hide
Query:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQARS
        MAYPLP KMKKP MK YDGS DPIDHI LYEGLMELNA GDEMKC+AFSVTLKGQARS
Subjt:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQARS

A0A6J1DHB3 uncharacterized protein LOC1110204798.3e-1951.85Show/hide
Query:  VWKRKTKYEKSVEPREESMKHVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLAL
        V K++ +      PR +    V  K  E   E + E  II + RP +++AF   D+E VH PHNDALVIAP ID V V+++LVDGGAS +ILSL+TYLAL
Subjt:  VWKRKTKYEKSVEPREESMKHVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLAL

Query:  GWERSQLK
        GW RSQLK
Subjt:  GWERSQLK

A0A6J1DHB3 uncharacterized protein LOC1110204796.6e-0854.72Show/hide
Query:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR
        +PPK K P MK YDGS+DP D++E++E LM+  AA D +KC AF + L G AR
Subjt:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR

A0A6J1DPC9 uncharacterized protein LOC1110222802.8e-2230.99Show/hide
Query:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR-----------SCGS-------GEFYDSPRHKD----------
        M  P+PPK K P MK YDGS+DP D++E++EGLM+  AA D +KC AF + L G AR           S  S       G+F  S RH D          
Subjt:  MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR-----------SCGS-------GEFYDSPRHKD----------

Query:  --STEDHLVVFVGVLLEEVFFKALDR-----HFMYELRAKVHKLEKLI--------------------------------------------QVWKRKTK
            ++ L V +G      F + L            LR K  + EK I                                            + W+ K +
Subjt:  --STEDHLVVFVGVLLEEVFFKALDR-----HFMYELRAKVHKLEKLI--------------------------------------------QVWKRKTK

Query:  YE-----------------KSVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDA
         E                  SVE +EE  +                          + K  E   E + +  II + +P  ++ F   D+E VH PHNDA
Subjt:  YE-----------------KSVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDA

Query:  LVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK
        LVIAP ID+V V++VLVDGGAS +ILSL TYLAL   RSQLK
Subjt:  LVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK

A0A6J1DPN4 uncharacterized protein LOC1110230608.9e-2131.34Show/hide
Query:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR--------------SCGSGEFYDS--PRHKD-STEDHLVVF---VGV
        +PPK K P MKSYDGS+DP D++E++EGLM+  AA D +KCRAF + L G AR              S    EF      RH D  T  HL       G 
Subjt:  LPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQAR--------------SCGSGEFYDS--PRHKD-STEDHLVVF---VGV

Query:  LLEEVFFK---------------------------------------------ALDRHFM---YELRAKVHKLEKLIQVWKRKTKYEK------------
         L+E   +                                              +++ F+     LR K  + EK  Q+ ++K+  +K            
Subjt:  LLEEVFFK---------------------------------------------ALDRHFM---YELRAKVHKLEKLIQVWKRKTKYEK------------

Query:  -------------SVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFI
                     SVE +EE  +                            K  E   E   E  II + RP  ++ F   D+E VH P+NDALVIAP I
Subjt:  -------------SVEPREESMK------------------------HVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFI

Query:  DNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK
        D+V V++VLVDGGAS +ILS    LALGW RSQLK
Subjt:  DNVKVKKVLVDGGASTDILSLTTYLALGWERSQLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATCCACTACCACCAAAGATGAAAAAACCATATATGAAGTCCTACGATGGATCGAGAGATCCGATTGACCATATAGAGCTATATGAAGGTTTGATGGAACTTAA
TGCTGCAGGGGATGAGATGAAATGCCGAGCTTTTTCGGTGACTTTAAAGGGTCAAGCAAGATCCTGCGGGAGTGGGGAGTTTTATGACTCTCCACGTCATAAGGATAGTA
CAGAAGACCATTTGGTGGTGTTCGTTGGTGTTTTACTTGAAGAAGTGTTCTTCAAAGCACTGGACCGTCACTTCATGTATGAGCTCAGAGCCAAGGTTCACAAGCTGGAA
AAACTCATTCAGGTTTGGAAAAGGAAGACAAAGTATGAAAAGAGTGTTGAGCCTAGAGAAGAGTCGATGAAGCATGTTCAAGTCAAAGCAGATGAAAGCTGGAGCGAAGT
AAAGCTGGAGTATGGAATCATTACACAACATAGGCCTGTTGCTACATTGGCATTTTACGCGGGGGATATGGAAAGAGTTCATTTCCCGCACAACGACGCTTTGGTTATTG
CACCTTTTATCGATAACGTCAAGGTGAAAAAAGTGTTGGTTGATGGAGGAGCGTCGACTGATATTCTATCTCTAACAACATACTTGGCCTTAGGATGGGAGAGGTCACAG
TTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTATCCACTACCACCAAAGATGAAAAAACCATATATGAAGTCCTACGATGGATCGAGAGATCCGATTGACCATATAGAGCTATATGAAGGTTTGATGGAACTTAA
TGCTGCAGGGGATGAGATGAAATGCCGAGCTTTTTCGGTGACTTTAAAGGGTCAAGCAAGATCCTGCGGGAGTGGGGAGTTTTATGACTCTCCACGTCATAAGGATAGTA
CAGAAGACCATTTGGTGGTGTTCGTTGGTGTTTTACTTGAAGAAGTGTTCTTCAAAGCACTGGACCGTCACTTCATGTATGAGCTCAGAGCCAAGGTTCACAAGCTGGAA
AAACTCATTCAGGTTTGGAAAAGGAAGACAAAGTATGAAAAGAGTGTTGAGCCTAGAGAAGAGTCGATGAAGCATGTTCAAGTCAAAGCAGATGAAAGCTGGAGCGAAGT
AAAGCTGGAGTATGGAATCATTACACAACATAGGCCTGTTGCTACATTGGCATTTTACGCGGGGGATATGGAAAGAGTTCATTTCCCGCACAACGACGCTTTGGTTATTG
CACCTTTTATCGATAACGTCAAGGTGAAAAAAGTGTTGGTTGATGGAGGAGCGTCGACTGATATTCTATCTCTAACAACATACTTGGCCTTAGGATGGGAGAGGTCACAG
TTGAAGTGA
Protein sequenceShow/hide protein sequence
MAYPLPPKMKKPYMKSYDGSRDPIDHIELYEGLMELNAAGDEMKCRAFSVTLKGQARSCGSGEFYDSPRHKDSTEDHLVVFVGVLLEEVFFKALDRHFMYELRAKVHKLE
KLIQVWKRKTKYEKSVEPREESMKHVQVKADESWSEVKLEYGIITQHRPVATLAFYAGDMERVHFPHNDALVIAPFIDNVKVKKVLVDGGASTDILSLTTYLALGWERSQ
LK