; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g09450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA repair protein XRCC4-like
Genome locationchr4:6959530..6964798
RNA-Seq ExpressionMoc04g09450
SyntenyMoc04g09450
Gene Ontology termsGO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0010165 - response to X-ray (biological process)
GO:0051103 - DNA ligation involved in DNA repair (biological process)
GO:0051351 - positive regulation of ligase activity (biological process)
GO:0005958 - DNA-dependent protein kinase-DNA ligase 4 complex (cellular component)
GO:0032807 - DNA ligase IV complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR009089 - XRCC4, N-terminal domain superfamily
IPR010585 - DNA repair protein XRCC4
IPR014751 - DNA repair protein XRCC4-like, C-terminal
IPR038051 - XRCC4-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571850.1 DNA repair protein XRCC4, partial [Cucurbita argyrosperma subsp. sororia]9.7e-10783.06Show/hide
Query:  SKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADA
        S+  + AMDAIRHTCLKLEVP+ AQ  + R   FVKGTW++HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYV+LAER+LGFQQP SVYGFAD 
Subjt:  SKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADA

Query:  GNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKA
        GNGDKRLSWTF+KEGMKLEWRW C+ ASDNK TTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESE CLAQSE+I  EKVEFETA+YAKFLNVLN+KKA
Subjt:  GNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKA

Query:  KLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        KLR YRDQ  KQTT SSKLKQ++EY SDKTE+FDD+SDAEKN
Subjt:  KLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

XP_008455175.1 PREDICTED: DNA repair protein XRCC4 [Cucumis melo]4.4e-10787.66Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ +E RS  FVKGTW  HRFDLSITDGL+AWTCHATEDEVRLRA QWDQEPSDYVALAER+LGFQQPGS+YGFADAGNG KRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTFDKEGMKLEWRW CQPASDNK TTA IL+FLMDANIRLSEEVVRKTQS ERLK ESE CLAQSEKI  EKVEFETAIYAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        QLSKQTT  SKLKQ EEYSSDKTE+FDDESDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

XP_022141947.1 DNA repair protein XRCC4-like [Momordica charantia]3.3e-163100Show/hide
Query:  MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA
        MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA
Subjt:  MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA

Query:  WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR
        WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR
Subjt:  WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR

Query:  KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
Subjt:  KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

XP_022952201.1 DNA repair protein XRCC4 [Cucurbita moschata]1.1e-10584.68Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ  + R   FVKGTW++HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYV+LAER+LGFQQP SVYGFAD GNGDKRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTF+KEGMKLEWRW C+ ASDNK TTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESE CLAQSE+I  EKVEFETA+YAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        Q  KQTT SSKLKQ++EY SDKTE+FDD+SDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

XP_038888651.1 DNA repair protein XRCC4 [Benincasa hispida]9.7e-10786.81Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDA RHTCLKLEVP+ AQ N+ RS  FVKGTW  H FDLSITDGLNAW+CHATEDEV LRA QWDQEPSDYVALAER+LGFQQPGSVYGF DAGNGD+RL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTFDKEGMKLEWRW C+PASDNK TTAGILDFLMDANIRLSEEVVRKTQ FERLK ESE CLAQSEKI  EKVEFETAIYAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        QLSKQTT  SKLKQ EEYSSDKTE+FDDESDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

TrEMBL top hitse value%identityAlignment
A0A1S3BZW1 DNA repair protein XRCC42.1e-10787.66Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ +E RS  FVKGTW  HRFDLSITDGL+AWTCHATEDEVRLRA QWDQEPSDYVALAER+LGFQQPGS+YGFADAGNG KRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTFDKEGMKLEWRW CQPASDNK TTA IL+FLMDANIRLSEEVVRKTQS ERLK ESE CLAQSEKI  EKVEFETAIYAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        QLSKQTT  SKLKQ EEYSSDKTE+FDDESDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

A0A5A7SK69 DNA repair protein XRCC42.1e-10787.66Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ +E RS  FVKGTW  HRFDLSITDGL+AWTCHATEDEVRLRA QWDQEPSDYVALAER+LGFQQPGS+YGFADAGNG KRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTFDKEGMKLEWRW CQPASDNK TTA IL+FLMDANIRLSEEVVRKTQS ERLK ESE CLAQSEKI  EKVEFETAIYAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        QLSKQTT  SKLKQ EEYSSDKTE+FDDESDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

A0A6J1CL88 DNA repair protein XRCC4-like1.6e-163100Show/hide
Query:  MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA
        MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA
Subjt:  MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNA

Query:  WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR
        WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR
Subjt:  WTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVR

Query:  KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
Subjt:  KTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

A0A6J1GJL0 DNA repair protein XRCC45.2e-10684.68Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ  + R   FVKGTW++HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYV+LAER+LGFQQP SVYGFAD GNGDKRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTF+KEGMKLEWRW C+ ASDNK TTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESE CLAQSE+I  EKVEFETA+YAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        Q  KQTT SSKLKQ++EY SDKTE+FDD+SDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

A0A6J1I7A5 DNA repair protein XRCC4 isoform X14.4e-10584.26Show/hide
Query:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL
        MDAIRHTCLKLEVP+ AQ  + R   FVKGTW++HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYV LAER+LGFQQP SVY FAD GNGDKRL
Subjt:  MDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRL

Query:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
        SWTF+KEGMKLEWRW C+ ASDNK TTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESE CLAQSE+I  EKVEFETA+YAKFLNVLN+KKAKLR YRD
Subjt:  SWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN
        Q  KQTT SSKLKQ++EY SDKTE+FDD+SDAEKN
Subjt:  QLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN

SwissProt top hitse value%identityAlignment
Q13426 DNA repair protein XRCC43.5e-0623.75Show/hide
Query:  LKLEVPSIAQSNESRSIFFVKGTW---FRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVA-LAERHLGFQQPGSVYGFADAGNGDKRLSWTF
        ++ ++  I   +E     F++ +W       F +++TDG +AWT   +E E+   A+    E   YV  L +  L    P  VY F    N  K   + F
Subjt:  LKLEVPSIAQSNESRSIFFVKGTW---FRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVA-LAERHLGFQQPGSVYGFADAGNGDKRLSWTF

Query:  DKEGMK-LEWR---WNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD
         ++ +K + +R   +N +   +  +    ++ + +D       +     +  ERL  +  +   + EK    K   ET +Y +F+ VLN KK K+R+  +
Subjt:  DKEGMK-LEWR---WNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRD

Query:  QLSKQTTGSSK-LKQE------EEYSSDKTETFDDESDAE
        +L        K +KQE       E ++D+   +D+ +D E
Subjt:  QLSKQTTGSSK-LKQE------EEYSSDKTETFDDESDAE

Q682V0 DNA repair protein XRCC49.9e-7059.48Show/hide
Query:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF
        +HTCL+LE+             FVKGTW   RFD+S+TDG ++W C+ATE+EV  RA QWDQ  S+Y+ LAE++LGFQQP SVY F+DA  G KRLSWTF
Subjt:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF

Query:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK
        +KEG KLEWRW C+P+ D+KK T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E CLAQ EK+  EK EFE+A YAKFL+VLN+KKAKLRA RD+   
Subjt:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK

Query:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN
             S    EEE S+DK E+F+   SD EK+
Subjt:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN

Q924T3 DNA repair protein XRCC43.2e-0423.75Show/hide
Query:  LKLEVPSIAQSNESRSIFFVKGTWFR---HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGS----VYGFADAGNGDKRLS
        ++ +V  I  ++E    +F++ +W R     F +++TDG +AWT   +E E+   A+    E   Y+    + L    PGS     Y F  +        
Subjt:  LKLEVPSIAQSNESRSIFFVKGTWFR---HRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGS----VYGFADAGNGDKRLS

Query:  WTFDKEGMKLEWR---WNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAY
        ++ +KE   + +R   +N    S++ +    ++ + +D       +     +  ERL  +  +   + EK    K   E  +Y +F+ VLN KK K+R+ 
Subjt:  WTFDKEGMKLEWR---WNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAY

Query:  RDQLSK-QTTGSSKLKQEEEYSSDKTE----TFDDESDAE
           L++ Q    S   + E   SDKT      +D  +D E
Subjt:  RDQLSK-QTTGSSKLKQEEEYSSDKTE----TFDDESDAE

Arabidopsis top hitse value%identityAlignment
AT1G61410.1 DNA double-strand break repair and VJ recombination XRCC46.2e-1957.14Show/hide
Query:  MDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETF-----DDE
        M+ANIRLSEEVV KT+SFE++K E+E CLAQ EK+  EK EFE A YAKFL+VLN+KKAKLRA RD+        S    EEE S+ K E+F     DDE
Subjt:  MDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETF-----DDE

Query:  SDAEK
           E+
Subjt:  SDAEK

AT3G23100.1 homolog of human DNA ligase iv-binding protein XRCC47.0e-7159.48Show/hide
Query:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF
        +HTCL+LE+             FVKGTW   RFD+S+TDG ++W C+ATE+EV  RA QWDQ  S+Y+ LAE++LGFQQP SVY F+DA  G KRLSWTF
Subjt:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF

Query:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK
        +KEG KLEWRW C+P+ D+KK T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E CLAQ EK+  EK EFE+A YAKFL+VLN+KKAKLRA RD+   
Subjt:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK

Query:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN
             S    EEE S+DK E+F+   SD EK+
Subjt:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN

AT3G23100.2 homolog of human DNA ligase iv-binding protein XRCC47.0e-7159.48Show/hide
Query:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF
        +HTCL+LE+             FVKGTW   RFD+S+TDG ++W C+ATE+EV  RA QWDQ  S+Y+ LAE++LGFQQP SVY F+DA  G KRLSWTF
Subjt:  RHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEVRLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTF

Query:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK
        +KEG KLEWRW C+P+ D+KK T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E CLAQ EK+  EK EFE+A YAKFL+VLN+KKAKLRA RD+   
Subjt:  DKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSEKISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSK

Query:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN
             S    EEE S+DK E+F+   SD EK+
Subjt:  QTTGSSKLKQEEEYSSDKTETFDD-ESDAEKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGAAACTCGCGTCCATGGAACCTTCGCCCCATCCCTGTCCCAAAATTGCGGGGATGGGGCTAGGGATGGGAATTGCCCTCTAGGCCCGCCCCACCCGGTTGCAGA
TCTTTGCAAGAAAAATAACCATTTAGAGTCGAAGAAGAATCGTTACGCCATGGACGCGATCAGGCACACATGCCTGAAGCTTGAAGTGCCAAGTATCGCGCAATCGAACG
AAAGCCGCTCCATCTTCTTCGTCAAAGGCACTTGGTTTCGCCACCGCTTCGATCTCTCCATTACCGACGGCCTCAATGCTTGGACTTGCCATGCGACGGAGGACGAGGTT
CGATTGCGCGCCGAACAATGGGACCAAGAACCCTCGGACTATGTGGCGTTGGCGGAACGGCATTTAGGGTTTCAGCAGCCTGGTTCGGTCTATGGGTTCGCCGACGCTGG
AAATGGGGACAAGAGGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTAGAATGGCGATGGAATTGTCAACCAGCATCTGATAATAAGAAGACAACTGCAGGAATAT
TGGACTTTCTCATGGATGCCAACATAAGGCTGAGCGAAGAGGTTGTCAGAAAAACACAATCGTTTGAGAGGCTGAAAGTTGAATCTGAGAATTGTTTGGCTCAAAGTGAG
AAGATTAGTGGCGAAAAGGTGGAGTTCGAAACTGCAATTTATGCAAAGTTTCTCAATGTCTTGAACTCGAAGAAAGCAAAACTTAGAGCGTACAGAGATCAGCTTTCGAA
ACAGACTACTGGCAGCAGCAAGCTGAAACAAGAAGAGGAGTACTCCTCTGACAAAACCGAAACTTTTGACGATGAAAGCGATGCCGAAAAGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGAAACTCGCGTCCATGGAACCTTCGCCCCATCCCTGTCCCAAAATTGCGGGGATGGGGCTAGGGATGGGAATTGCCCTCTAGGCCCGCCCCACCCGGTTGCAGA
TCTTTGCAAGAAAAATAACCATTTAGAGTCGAAGAAGAATCGTTACGCCATGGACGCGATCAGGCACACATGCCTGAAGCTTGAAGTGCCAAGTATCGCGCAATCGAACG
AAAGCCGCTCCATCTTCTTCGTCAAAGGCACTTGGTTTCGCCACCGCTTCGATCTCTCCATTACCGACGGCCTCAATGCTTGGACTTGCCATGCGACGGAGGACGAGGTT
CGATTGCGCGCCGAACAATGGGACCAAGAACCCTCGGACTATGTGGCGTTGGCGGAACGGCATTTAGGGTTTCAGCAGCCTGGTTCGGTCTATGGGTTCGCCGACGCTGG
AAATGGGGACAAGAGGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTAGAATGGCGATGGAATTGTCAACCAGCATCTGATAATAAGAAGACAACTGCAGGAATAT
TGGACTTTCTCATGGATGCCAACATAAGGCTGAGCGAAGAGGTTGTCAGAAAAACACAATCGTTTGAGAGGCTGAAAGTTGAATCTGAGAATTGTTTGGCTCAAAGTGAG
AAGATTAGTGGCGAAAAGGTGGAGTTCGAAACTGCAATTTATGCAAAGTTTCTCAATGTCTTGAACTCGAAGAAAGCAAAACTTAGAGCGTACAGAGATCAGCTTTCGAA
ACAGACTACTGGCAGCAGCAAGCTGAAACAAGAAGAGGAGTACTCCTCTGACAAAACCGAAACTTTTGACGATGAAAGCGATGCCGAAAAGAACTAA
Protein sequenceShow/hide protein sequence
MRETRVHGTFAPSLSQNCGDGARDGNCPLGPPHPVADLCKKNNHLESKKNRYAMDAIRHTCLKLEVPSIAQSNESRSIFFVKGTWFRHRFDLSITDGLNAWTCHATEDEV
RLRAEQWDQEPSDYVALAERHLGFQQPGSVYGFADAGNGDKRLSWTFDKEGMKLEWRWNCQPASDNKKTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESENCLAQSE
KISGEKVEFETAIYAKFLNVLNSKKAKLRAYRDQLSKQTTGSSKLKQEEEYSSDKTETFDDESDAEKN