; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g09680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCD2 antigen cytoplasmic tail-binding protein 2
Genome locationchr4:7146435..7157144
RNA-Seq ExpressionMoc04g09680
SyntenyMoc04g09680
Gene Ontology termsGO:0005682 - U5 snRNP (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR039905 - CD2 antigen cytoplasmic tail-binding protein 2/Lin1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136873.1 CD2 antigen cytoplasmic tail-binding protein 2 homolog [Cucumis sativus]8.6e-8685.49Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        ME N SRP+LKRRF E+EDDDS+K TAQKRVRFPKG+KVK GDAF+DKGKAEE+P DLTDPR AAKERAKRRNQMTADLFSEENRG+VN+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ADGIQ+EPFNLDKEREEGYFDA GNFVEYVND EIKDAWLD+VD+DPKYTGK STVIN EDDVQELSSEEVGKIKRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

XP_008455212.1 PREDICTED: CD2 antigen cytoplasmic tail-binding protein 2 homolog [Cucumis melo]9.2e-8887.05Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        ME N SRP+LKRRF E+EDDDS+KPTAQKRVRFPKGKKVK GDAF+DKGKAEE+P DLTDPR AAKERAKRRNQMTADLFSEENRGLVN+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ADGIQ+EPFNLDKEREEGYFDA GNFVEYVND EIKDAWLD+VD+DPKYTGK+S VINNEDDVQELSSEEVGKIKRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

XP_022141936.1 CD2 antigen cytoplasmic tail-binding protein 2 [Momordica charantia]2.8e-10099.48Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

XP_023531275.1 CD2 antigen cytoplasmic tail-binding protein 2 homolog [Cucurbita pepo subsp. pepo]2.8e-8486.01Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        MEGN   PSLKRRFLE ED DS KP AQKRVRFPKGKKVK GDAFVD  KAEE+P DLTDPRFAAKERAKRRNQMTADLFSEENRG+ N+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ DGIQ+EPFNLDKEREEGYFDA GNFVEYVNDNEIKDAWLD+VD+DPKYTGKTS+VINNEDDVQELSS+EVGKIKRRIA LLEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

XP_038889011.1 CD2 antigen cytoplasmic tail-binding protein 2 [Benincasa hispida]6.0e-8786.53Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        ME N SRP+LKRRF E+ED DS+KPTAQKRVRFPKGKKVKPGD FVDKGKAEESP DL DPR AAKERAKRRNQMTADLFSEENRGL N+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ADGIQ+EPFNLDKEREEGYFDA GNFVEYVNDNE+KDAWLD+VDVDPKY GK+S VINNEDDVQELSSEEVGKIKRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

TrEMBL top hitse value%identityAlignment
A0A0A0K401 OCRE domain-containing protein4.2e-8685.49Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        ME N SRP+LKRRF E+EDDDS+K TAQKRVRFPKG+KVK GDAF+DKGKAEE+P DLTDPR AAKERAKRRNQMTADLFSEENRG+VN+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ADGIQ+EPFNLDKEREEGYFDA GNFVEYVND EIKDAWLD+VD+DPKYTGK STVIN EDDVQELSSEEVGKIKRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

A0A1S3C146 CD2 antigen cytoplasmic tail-binding protein 2 homolog4.5e-8887.05Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        ME N SRP+LKRRF E+EDDDS+KPTAQKRVRFPKGKKVK GDAF+DKGKAEE+P DLTDPR AAKERAKRRNQMTADLFSEENRGLVN+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ADGIQ+EPFNLDKEREEGYFDA GNFVEYVND EIKDAWLD+VD+DPKYTGK+S VINNEDDVQELSSEEVGKIKRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

A0A6J1CKP8 CD2 antigen cytoplasmic tail-binding protein 21.3e-10099.48Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

A0A6J1EII6 CD2 antigen cytoplasmic tail-binding protein 2 homolog2.3e-8486.01Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        MEGN   PSLKRRFLE ED DS KP AQKRVRFPKGKKVK GDAFVD  KAEE+P DLTDPRFAAKERAKRRNQMTADLFSEENRG+ N+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ DGIQ+EPFNLDKEREEGYFDA GNFVEYVNDNEIKDAWLD+VD+DPKYTGKTS+VINNEDDVQELSS+EVGKIKRRIA LLEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

A0A6J1JML6 SUPPRESSOR OF ABI3-55.1e-8485.49Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        MEGN   PSLKRRFLE ED DS KP AQKRVRFPKGKKVK GDAFVD  KAEE+P DLTDPRFAAKERAKRRNQMTADLF+EENRG+ N+ISAAEVTYE+
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        +ENF+ DGIQ+EPFNLDKEREEGYFDA GNFVEYVNDNEIKDAWLD+VD+DPKYTGKTS+VINNEDDVQELSS+EVGKIKRRIA LLEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

SwissProt top hitse value%identityAlignment
O95400 CD2 antigen cytoplasmic tail-binding protein 22.2e-0737.14Show/hide
Query:  EDSENFEA------DGIQIEPFNLDKEREEGYFDADGNFVEYVN-DNEIKDAWLDNVD---VDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLE
        ED E  EA       G++I PFNL +E EEG+FDADGN+  ++N D +I+D+WLDN+D   +  +  G+     + E+D    +S     +   +  LL 
Subjt:  EDSENFEA------DGIQIEPFNLDKEREEGYFDADGNFVEYVN-DNEIKDAWLDNVD---VDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLE

Query:  PGETI
        P ET+
Subjt:  PGETI

Q9CWK3 CD2 antigen cytoplasmic tail-binding protein 21.4e-0629.73Show/hide
Query:  KDLTDPRFAA---KERAKRRNQMTADLFSEENRG--LVNNISAAEVTYEDSENFEAD-GIQIEPFNLDKEREEGYFDADGNFVEYVN-DNEIKDAWLDNV
        K L DP  AA     R K ++ + +D   ++  G    + +++ +V  +++    ++ G++I PFNL +E EEG+FDADGN+  ++N D +I+D+WLDN+
Subjt:  KDLTDPRFAA---KERAKRRNQMTADLFSEENRG--LVNNISAAEVTYEDSENFEAD-GIQIEPFNLDKEREEGYFDADGNFVEYVN-DNEIKDAWLDNV

Query:  D---VDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI
        D   +  +   K     + E+D    +      +   +  LL P ET+
Subjt:  D---VDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETI

Q9VKV5 CD2 antigen cytoplasmic tail-binding protein 2 homolog4.1e-0632.99Show/hide
Query:  DGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTS--TVINNEDDVQELSSEEVGKI------KRRIAGLLEPGETINL
        D +++ PFN+ +E EEG+FD DG++  +  + E KD WLDN+D     T K +     + E+   E  +E VGK         ++   ++PGET+ +
Subjt:  DGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTS--TVINNEDDVQELSSEEVGKI------KRRIAGLLEPGETINL

Arabidopsis top hitse value%identityAlignment
AT5G09390.1 CD2-binding protein-related2.1e-4250.5Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        M  +SSR +LKR FLE+ED D   P  +KRVRFPKGKK KP     ++  A    +D      AAKERAK RNQ T  LF E++    ++I+ A+ TYED
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDD-------VQELSSEEVGKIKRRIAGLLEPGETI
          N   DGIQIE F+LD+E+EEGYFDADGNFVEYV + E+KDAWLD+++ +P Y G+++      DD         +LS +E+G  KRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDD-------VQELSSEEVGKIKRRIAGLLEPGETI

AT5G09390.2 CD2-binding protein-related2.1e-4250.5Show/hide
Query:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED
        M  +SSR +LKR FLE+ED D   P  +KRVRFPKGKK KP     ++  A    +D      AAKERAK RNQ T  LF E++    ++I+ A+ TYED
Subjt:  MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYED

Query:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDD-------VQELSSEEVGKIKRRIAGLLEPGETI
          N   DGIQIE F+LD+E+EEGYFDADGNFVEYV + E+KDAWLD+++ +P Y G+++      DD         +LS +E+G  KRRIA +LEPGET+
Subjt:  SENFEADGIQIEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDD-------VQELSSEEVGKIKRRIAGLLEPGETI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAATTCATCTCGCCCTAGTCTCAAGCGCCGCTTCTTAGAAGAAGAAGACGACGATTCTGTCAAACCCACTGCCCAAAAGCGAGTCAGGTTTCCAAAGGGTAA
GAAGGTGAAGCCTGGAGATGCATTTGTGGATAAAGGGAAAGCTGAAGAGAGCCCAAAGGATTTAACAGACCCACGATTTGCTGCCAAAGAGCGTGCCAAGCGGCGGAATC
AAATGACTGCTGACCTCTTCAGTGAAGAGAATAGAGGCCTCGTCAATAATATATCAGCGGCTGAAGTGACTTATGAGGATAGTGAGAACTTTGAAGCTGATGGAATTCAA
ATAGAACCTTTCAATTTAGACAAAGAGAGGGAAGAAGGTTATTTTGATGCAGATGGTAATTTTGTTGAATATGTAAATGACAATGAAATCAAGGATGCATGGCTTGATAA
TGTCGATGTTGATCCAAAGTATACTGGGAAAACCTCTACAGTAATAAATAATGAAGATGATGTCCAAGAGCTATCTTCTGAAGAAGTTGGAAAGATAAAGAGACGTATCG
CTGGCCTACTTGAGCCAGGTGAAACGATAAACCTTTTGGAGATGGGTGTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAAATTCATCTCGCCCTAGTCTCAAGCGCCGCTTCTTAGAAGAAGAAGACGACGATTCTGTCAAACCCACTGCCCAAAAGCGAGTCAGGTTTCCAAAGGGTAA
GAAGGTGAAGCCTGGAGATGCATTTGTGGATAAAGGGAAAGCTGAAGAGAGCCCAAAGGATTTAACAGACCCACGATTTGCTGCCAAAGAGCGTGCCAAGCGGCGGAATC
AAATGACTGCTGACCTCTTCAGTGAAGAGAATAGAGGCCTCGTCAATAATATATCAGCGGCTGAAGTGACTTATGAGGATAGTGAGAACTTTGAAGCTGATGGAATTCAA
ATAGAACCTTTCAATTTAGACAAAGAGAGGGAAGAAGGTTATTTTGATGCAGATGGTAATTTTGTTGAATATGTAAATGACAATGAAATCAAGGATGCATGGCTTGATAA
TGTCGATGTTGATCCAAAGTATACTGGGAAAACCTCTACAGTAATAAATAATGAAGATGATGTCCAAGAGCTATCTTCTGAAGAAGTTGGAAAGATAAAGAGACGTATCG
CTGGCCTACTTGAGCCAGGTGAAACGATAAACCTTTTGGAGATGGGTGTTTGCTGA
Protein sequenceShow/hide protein sequence
MEGNSSRPSLKRRFLEEEDDDSVKPTAQKRVRFPKGKKVKPGDAFVDKGKAEESPKDLTDPRFAAKERAKRRNQMTADLFSEENRGLVNNISAAEVTYEDSENFEADGIQ
IEPFNLDKEREEGYFDADGNFVEYVNDNEIKDAWLDNVDVDPKYTGKTSTVINNEDDVQELSSEEVGKIKRRIAGLLEPGETINLLEMGVC