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Moc04g09690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:7161882..7163622
RNA-Seq ExpressionMoc04g09690
SyntenyMoc04g09690
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.8e-2845.77Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +F+FW+MQ+ D L  KK+H+ L  +P +M  ++W+ +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG  V +H+NE   I+N+L  + ++ ++EV+A+ L+ SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.6e-2846.48Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +F+FW+MQ+ D L  KK+H+ L  +P +M  ++W+ +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG  V +H+NE   I+N+L  + ++ ++EV+A+ LL SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]1.6e-2846.48Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +F+FW+MQ+ D L  KK+H+ L  +P +M  ++W+ +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG  V +H+NE   I+N+L  + ++ ++EV+A+ LL SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

VDD56318.1 unnamed protein product [Brassica oleracea]5.6e-2946.48Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +++FW+MQ+ D L  KK+H+ L ++P ++   +W  +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG LV +H+NE   I+N+L  + ++ E+EV+A+ LL SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

VFQ72626.1 unnamed protein product [Cuscuta campestris]3.0e-3038.86Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G++FS+WKMQ+ DLL  K +   L ++P +M D DW  +D + ++ IR+SL+ NV   + KE   K ++ AL + YEKPSA  K+ L  +  N  M+
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRMRNESIS----KVRGIRDICLKTGEEGELVLRGVSSEFS------GRC----
        EGT V  HIN+L  IL +L  +G+K ++EV+A+ LL+SLP+S   +V     S+         IRD+ L     GE V R  S E S      GRC    
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRMRNESIS----KVRGIRDICLKTGEEGELVLRGVSSEFS------GRC----

Query:  ------WKLKRESRVVATGHKRSSIYVLE
              WK+ + + V+A G KR S+Y++E
Subjt:  ------WKLKRESRVVATGHKRSSIYVLE

TrEMBL top hitse value%identityAlignment
A0A0D3AEM1 CCHC-type domain-containing protein1.2e-2946.31Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +++FW+MQ+ D L  KK+H+ L ++P +M   +W  +D QV+  IR++LS NV   V KE   + L+K L D YEKPSAN+K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRM
        EG LV +HINE   I+N+L  + ++ E+EV+A+ LL SLPNS ++S+R+
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRM

A0A0D3CS45 Uncharacterized protein8.4e-3149.3Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G NF+FW+MQ+ D L  KK+H+ L ++P +M   +W  +D QV+  IR++LS NV   VAKE I + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG LV +H+NE   I+N+L  + ++ E+EV+A+ LL SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

A0A0D3DQC2 Abhydrolase_3 domain-containing protein4.6e-2945.83Show/hide
Query:  VLKFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIH
        + KF G +++FW+MQ+ D L  KK+H+ L ++P +M   +W  +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ 
Subjt:  VLKFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIH

Query:  MEEGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        MEEG LV +H+NE   I+N+L  + ++ ++EV+A+ LL SLPNS
Subjt:  MEEGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

A0A3P6FTI2 Abhydrolase_3 domain-containing protein2.7e-2946.48Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G +++FW+MQ+ D L  KK+H+ L ++P ++   +W  +D QV+  IR++LS NV   VAKE   + L+K L D YEKPSAN K+ L  K F++ ME
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS
        EG LV +H+NE   I+N+L  + ++ E+EV+A+ LL SLPNS
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNS

A0A484L8J6 Uncharacterized protein1.4e-3038.86Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME
        KF G++FS+WKMQ+ DLL  K +   L ++P +M D DW  +D + ++ IR+SL+ NV   + KE   K ++ AL + YEKPSA  K+ L  +  N  M+
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYFNIHME

Query:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRMRNESIS----KVRGIRDICLKTGEEGELVLRGVSSEFS------GRC----
        EGT V  HIN+L  IL +L  +G+K ++EV+A+ LL+SLP+S   +V     S+         IRD+ L     GE V R  S E S      GRC    
Subjt:  EGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRMRNESIS----KVRGIRDICLKTGEEGELVLRGVSSEFS------GRC----

Query:  ------WKLKRESRVVATGHKRSSIYVLE
              WK+ + + V+A G KR S+Y++E
Subjt:  ------WKLKRESRVVATGHKRSSIYVLE

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.9e-2037.66Show/hide
Query:  EVLKFTGEN-FSFWKMQVNDLLTCKKIHKTL---RERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTK
        EV KF G+N FS W+ ++ DLL  + +HK L    ++P  M  +DW ++DE+  + IR+ LS +V + +  E   + +   L+  Y   +   K+ L  +
Subjt:  EVLKFTGEN-FSFWKMQVNDLLTCKKIHKTL---RERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTK

Query:  YFNIHMEEGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSV
         + +HM EGT   SH+N    ++ +L  +GVKIEEE KAI LL SLP+S YD++
Subjt:  YFNIHMEEGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSV

Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein3.3e-1138.2Show/hide
Query:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKIL
        K  G ++SF +M++ D L  KK+H+ L ++   M   DWN +  QV+  IR+++S N+   VAKE     L+K L D Y+KPS N  ++
Subjt:  KFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAAATATCACGCACACCATTACTATAAAGAGGTTCTGAAGTTCACCGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAATGATCTTCTTACATGCAAGAA
GATACACAAGACTTTAAGGGAGAGACCAGCAGAAATGGTAGACAAGGATTGGAATGAGATGGATGAGCAGGTCGTTGCGAATATCAGAATGTCGTTGTCAATGAATGTTT
GTAGTTTGGTGGCGAAAGAGACTATAGTGAAGGAGTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATACTTCTATGGACGAAGTATTTT
AATATCCACATGGAGGAGGGAACCTTGGTGAATTCACACATTAATGAACTCACCGATATCTTGAACAAGTTAAAAGGGATGGGTGTCAAGATTGAGGAGGAGGTGAAAGC
TATAAGGCTGTTGACGTCCTTGCCTAACAGTGATTATGACTCAGTGAGGATGAGGAATGAGAGTATCTCCAAGGTGAGAGGAATTAGAGATATTTGTTTGAAGACAGGCG
AAGAGGGCGAGTTGGTGCTACGAGGTGTTAGTAGTGAGTTTAGTGGACGTTGCTGGAAGCTCAAGAGGGAATCTAGGGTGGTGGCAACAGGCCACAAGAGATCTTCTATT
TATGTGTTAGAGTTTGGGGTTGCCAAGGGTTCACTAAGACGGACTATGCACAGAGTAGCTGCAGATGATTCAGGGCGAGACCTTAGAGAATCAACAACATTGATGGCCAT
AACAGATCAGAATAATCTGCCATCAGCTCAATCGCATAGGCGAATTAGTGCATTGAAGGATACGGGTTCTGTTTCTAGTGTGGCAACAAACTTGAGGTGGGAGCGCCAAG
TCATCAGGGGAATCTTTCTTCAGAGACAAGACCAGGTTGAGCTGCCCAGTTTCAGGGCAGAATCAGACGATGCTTGGGTAGAGCCAAGCAGTATTGATCAATTCGTTGAT
GAAGGAGTCAAAACTGTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACAAATATCACGCACACCATTACTATAAAGAGGTTCTGAAGTTCACCGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAATGATCTTCTTACATGCAAGAA
GATACACAAGACTTTAAGGGAGAGACCAGCAGAAATGGTAGACAAGGATTGGAATGAGATGGATGAGCAGGTCGTTGCGAATATCAGAATGTCGTTGTCAATGAATGTTT
GTAGTTTGGTGGCGAAAGAGACTATAGTGAAGGAGTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATACTTCTATGGACGAAGTATTTT
AATATCCACATGGAGGAGGGAACCTTGGTGAATTCACACATTAATGAACTCACCGATATCTTGAACAAGTTAAAAGGGATGGGTGTCAAGATTGAGGAGGAGGTGAAAGC
TATAAGGCTGTTGACGTCCTTGCCTAACAGTGATTATGACTCAGTGAGGATGAGGAATGAGAGTATCTCCAAGGTGAGAGGAATTAGAGATATTTGTTTGAAGACAGGCG
AAGAGGGCGAGTTGGTGCTACGAGGTGTTAGTAGTGAGTTTAGTGGACGTTGCTGGAAGCTCAAGAGGGAATCTAGGGTGGTGGCAACAGGCCACAAGAGATCTTCTATT
TATGTGTTAGAGTTTGGGGTTGCCAAGGGTTCACTAAGACGGACTATGCACAGAGTAGCTGCAGATGATTCAGGGCGAGACCTTAGAGAATCAACAACATTGATGGCCAT
AACAGATCAGAATAATCTGCCATCAGCTCAATCGCATAGGCGAATTAGTGCATTGAAGGATACGGGTTCTGTTTCTAGTGTGGCAACAAACTTGAGGTGGGAGCGCCAAG
TCATCAGGGGAATCTTTCTTCAGAGACAAGACCAGGTTGAGCTGCCCAGTTTCAGGGCAGAATCAGACGATGCTTGGGTAGAGCCAAGCAGTATTGATCAATTCGTTGAT
GAAGGAGTCAAAACTGTGCCTTGA
Protein sequenceShow/hide protein sequence
MGDKYHAHHYYKEVLKFTGENFSFWKMQVNDLLTCKKIHKTLRERPAEMVDKDWNEMDEQVVANIRMSLSMNVCSLVAKETIVKELLKALQDRYEKPSANTKILLWTKYF
NIHMEEGTLVNSHINELTDILNKLKGMGVKIEEEVKAIRLLTSLPNSDYDSVRMRNESISKVRGIRDICLKTGEEGELVLRGVSSEFSGRCWKLKRESRVVATGHKRSSI
YVLEFGVAKGSLRRTMHRVAADDSGRDLRESTTLMAITDQNNLPSAQSHRRISALKDTGSVSSVATNLRWERQVIRGIFLQRQDQVELPSFRAESDDAWVEPSSIDQFVD
EGVKTVP