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Moc04g09770 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09770
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:7255367..7260512
RNA-Seq ExpressionMoc04g09770
SyntenyMoc04g09770
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79188.1 hypothetical protein VITISV_033760 [Vitis vinifera]1.9e-3737.38Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEE-DVKKKKRVTLKSTS--
        M  N++I EM TRFT+IVN L+ LGK Y  ++ V KILRSLP  W  KVTAIQEA DL+KL +EE IGSLM ++I +   +++ + K KK + LK+T+  
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEE-DVKKKKRVTLKSTS--

Query:  -----FQGASESEEELAYLSKSFKKH-----FKKRHFP-------KKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDES
              +  S+ +++L  +++   K+     F+ R FP       K++++   K +   +  +IC++CKK  H++Y+CP  +  + RR KKAM AT  ES
Subjt:  -----FQGASESEEELAYLSKSFKKH-----FKKRHFP-------KKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDES

Query:  DEGSDFESAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDDQPNPIGLGRVRLKKTYLAKKTENLD
        +E S+ E  +EVAN+CFMA  D D+ + N  D+  + V ++   D E L L  +SLK   Q         LE + +        V + KT+L K  E L 
Subjt:  DEGSDFESAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDDQPNPIGLGRVRLKKTYLAKKTENLD

Query:  GSDSV
          + V
Subjt:  GSDSV

CAN81526.1 hypothetical protein VITISV_030432 [Vitis vinifera]4.9e-3838.91Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKK-RVTLKSTSFQ
        M  N++I EM TRFTNI N L+ LGK Y  ++NV KILRSLP  W  KVTAIQEA DL+KL +EE IGSLM ++I +   ++E  KKKK R+TLK+T+ +
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKK-RVTLKSTSFQ

Query:  G-------ASESEEELAYLSKSFKKHFKKRHF------------PKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDES
        G        SE +++LA +++   K+ +   F             K++++   K +   +  ++C++CKK  H++Y+CP  +  + RR KK M AT  ES
Subjt:  G-------ASESEEELAYLSKSFKKHFKKRHF------------PKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDES

Query:  DEGSDFESAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDD
        +E S+ E  +EVAN+CFM   + D+ + N  D+  +   ++   D E L L   SLK+  Q  E    +G + D+
Subjt:  DEGSDFESAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDD

XP_022143648.1 uncharacterized protein LOC111013509 [Momordica charantia]2.2e-7883.94Show/hide
Query:  LKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQGASES-----EEELAYLSKSF
        + GLGKEYTTA+NVRKILRSLPKSWE KVTAIQEA DLSKL LEE IGSLM H+I+MKGNMEEDVKKKK + LKSTSFQ ASES     EEELAYLSK F
Subjt:  LKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQGASES-----EEELAYLSKSF

Query:  KKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANLCFMAFGDEDDDDE
        KKHFKKRHFPKKTN+QDAKGEKNTRD+IICYECKKA HVR ECP LRKSS RRNKKAMKAT DESD GSD ES EEVANLCFMAFGDEDDD+E
Subjt:  KKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANLCFMAFGDEDDDDE

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]7.8e-5245.21Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQG
        MDAN++I +MFTRFTNI+NALKGLGK YTT++NVRKILRSLPK+WE KVTAIQEA DL+KL LEE IGSLM H+IIMK ++E++ KKKK + LK+ S + 
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQG

Query:  ASE-----SEEELAYLSKSFKKHFK-KRHFPKKTNTQ-DAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVA
          E      E+++AY S+ +K   K K++F K  +TQ ++KGEK+ +D +ICYECK++ H+R +C PL KSS +  KKAMKAT D+S E       EE+A
Subjt:  ASE-----SEEELAYLSKSFKKHFK-KRHFPKKTNTQ-DAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVA

Query:  NLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDDQPNPIGLGRVRLKKTYLAKKTENLDGSDSVRWRREGDG
        NL  MA  D+DD+ +                  + + L+  S+ E ++++E      ++ND +   +    V LKK Y    +EN    D++   +E + 
Subjt:  NLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDDQPNPIGLGRVRLKKTYLAKKTENLDGSDSVRWRREGDG

Query:  GER
         E+
Subjt:  GER

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.2e-6867.43Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQG
        MDAN++I+EMFTRFTNIVN LKGLGK YTT++NVRKILRSLPKSWE KVT IQEA DLSKL LEE +GSLM H+IIMK N+EEDVKKKK + LKST  Q 
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQG

Query:  ASESE-----EELAYLSKSFKKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANL
         SE+E     EE AYL+K FKKHF+KR+F KK N Q+ KGEK+ RD IICYECKK  HV ++ P  RK+  ++++KAMKATLDESDE S+FES E VANL
Subjt:  ASESE-----EELAYLSKSFKKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANL

Query:  CFMAFGDEDDDDENLQDD
        C MAF D+DDDD+ +  +
Subjt:  CFMAFGDEDDDDENLQDD

TrEMBL top hitse value%identityAlignment
A0A2N9ECJ4 CCHC-type domain-containing protein2.8e-3948.61Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---
        M  +++I+EM TRFTNIVN LK LGK YT  +NVRKILRSLPK WE K+TAI EA DL  L LEE  GSLM +++ M   + EE+VK KK   LKS+   
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---

Query:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES
          + +   + EEE+A ++++FKK  KK     R FPKK    + KGE +  +   CY+CKK  H + ECP + K +++  KKA+KAT D+SDE  SD  S
Subjt:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES

Query:  AE-EVANLCFMAFGDE
        ++ EVANLC + + +E
Subjt:  AE-EVANLCFMAFGDE

A0A2N9EN48 CCHC-type domain-containing protein1.8e-3845.45Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---
        M  +++I+EM TRFTNIVN LK LGK YT  +NVRKILRSLPK WE K TAI EA DL  L+L+E  GSLM +++ M   + EE+VK KK   LKS+   
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---

Query:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES
          + +  S+ EEE+A +++ FKK  KK     R FPKK    + +GE +  +  ICY+CKK  H + ECP + K +++  KKA+KAT D+SDE  SD  S
Subjt:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES

Query:  AE-EVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL
        ++ E+ANLC + + +E D  E+            D+   EDL
Subjt:  AE-EVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL

A0A2N9I7S8 CCHC-type domain-containing protein1.8e-3845.45Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---
        M  +++I+EM TRFTNIVN LK LGK YT  +NVRKILRSLPK WE K TAI EA DL  L+L+E  GSLM +++ M   + EE+VK KK   LKS+   
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNM-EEDVKKKKRVTLKST---

Query:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES
          + +  S+ EEE+A +++ FKK  KK     R FPKK    + +GE +  +  ICY+CKK  H + ECP + K +++  KKA+KAT D+SDE  SD  S
Subjt:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEG-SDFES

Query:  AE-EVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL
        ++ E+ANLC + + +E D  E+            D+   EDL
Subjt:  AE-EVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL

A0A2N9IFK4 CCHC-type domain-containing protein1.4e-3845.68Show/hide
Query:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEED-VKKKKRVTLKST---
        M  +++I+EM TRFTNIVN LK LGK YT  +NVRKILRSLPK WE K TAI EA DL  L+L+E  GSLM +++ M   +EE+ VK KK   LKS+   
Subjt:  MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEED-VKKKKRVTLKST---

Query:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFE--
          + +  S+ EEE+A +++ FKK  KK     R FPKK    + KGE +  +  ICY+CKK  H + ECP + K +++  KKA+KAT D+SDE SD +  
Subjt:  --SFQGASESEEELAYLSKSFKKHFKK-----RHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFE--

Query:  -SAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL
         S  E+ANLC + + +E D  E+            D+   EDL
Subjt:  -SAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQKDDYDGEDL

A0A6J1CR79 uncharacterized protein LOC1110135091.1e-7883.94Show/hide
Query:  LKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQGASES-----EEELAYLSKSF
        + GLGKEYTTA+NVRKILRSLPKSWE KVTAIQEA DLSKL LEE IGSLM H+I+MKGNMEEDVKKKK + LKSTSFQ ASES     EEELAYLSK F
Subjt:  LKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQGASES-----EEELAYLSKSF

Query:  KKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANLCFMAFGDEDDDDE
        KKHFKKRHFPKKTN+QDAKGEKNTRD+IICYECKKA HVR ECP LRKSS RRNKKAMKAT DESD GSD ES EEVANLCFMAFGDEDDD+E
Subjt:  KKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANLCFMAFGDEDDDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTAACGACTCTATTAATGAGATGTTTACTAGATTTACGAATATTGTTAATGCTTTGAAAGGTTTAGGAAAGGAATATACTACAGCTAAGAACGTGAGGAAGAT
TCTAAGATCTCTGCCAAAAAGTTGGGAACTCAAAGTGACGGCGATTCAAGAAGCGAATGATCTCTCAAAACTTGCATTGGAGGAGTTCATTGGATCTCTCATGATGCATA
AGATAATCATGAAAGGTAATATGGAAGAGGACGTCAAAAAGAAGAAAAGAGTGACATTAAAGTCTACATCATTCCAAGGGGCTTCTGAAAGTGAGGAAGAACTTGCCTAC
TTGTCCAAGAGTTTCAAGAAGCATTTCAAGAAGAGGCACTTTCCAAAGAAAACCAACACTCAAGATGCTAAAGGAGAAAAGAATACTAGAGACGTCATCATCTGCTATGA
GTGCAAAAAGGCTAGACATGTAAGATATGAATGCCCTCCACTACGTAAATCATCTTTAAGGAGAAACAAGAAGGCTATGAAAGCTACTTTGGATGAAAGTGATGAAGGAA
GTGATTTTGAAAGTGCAGAGGAAGTAGCTAATCTTTGTTTCATGGCTTTTGGAGATGAAGATGATGATGACGAGAATTTACAAGATGACATGGGAAATACTGTTATTCAG
AAAGATGATTATGATGGTGAAGATTTAGAACTTGACGAAGATTCTCTCAAAGAAGCTTACCAAAGTTGGGAATTTGTGGGAACCGACGGATTGGAAAATGATGACCAACC
CAACCCAATAGGGTTGGGTCGGGTTAGATTAAAAAAAACCTACTTGGCGAAAAAAACAGAGAACCTTGACGGCAGCGACAGCGTGAGGTGGAGACGGGAGGGCGACGGCG
GCGAGAGGTGGAGACGAGTTTTCGGCGGTAGCGTGAGGTGGAGACGGGAGGGCGGTGACGGCGAGATTGAAGTTAAATCTGAAAAAATGGGAAGTTGGGAACAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTAACGACTCTATTAATGAGATGTTTACTAGATTTACGAATATTGTTAATGCTTTGAAAGGTTTAGGAAAGGAATATACTACAGCTAAGAACGTGAGGAAGAT
TCTAAGATCTCTGCCAAAAAGTTGGGAACTCAAAGTGACGGCGATTCAAGAAGCGAATGATCTCTCAAAACTTGCATTGGAGGAGTTCATTGGATCTCTCATGATGCATA
AGATAATCATGAAAGGTAATATGGAAGAGGACGTCAAAAAGAAGAAAAGAGTGACATTAAAGTCTACATCATTCCAAGGGGCTTCTGAAAGTGAGGAAGAACTTGCCTAC
TTGTCCAAGAGTTTCAAGAAGCATTTCAAGAAGAGGCACTTTCCAAAGAAAACCAACACTCAAGATGCTAAAGGAGAAAAGAATACTAGAGACGTCATCATCTGCTATGA
GTGCAAAAAGGCTAGACATGTAAGATATGAATGCCCTCCACTACGTAAATCATCTTTAAGGAGAAACAAGAAGGCTATGAAAGCTACTTTGGATGAAAGTGATGAAGGAA
GTGATTTTGAAAGTGCAGAGGAAGTAGCTAATCTTTGTTTCATGGCTTTTGGAGATGAAGATGATGATGACGAGAATTTACAAGATGACATGGGAAATACTGTTATTCAG
AAAGATGATTATGATGGTGAAGATTTAGAACTTGACGAAGATTCTCTCAAAGAAGCTTACCAAAGTTGGGAATTTGTGGGAACCGACGGATTGGAAAATGATGACCAACC
CAACCCAATAGGGTTGGGTCGGGTTAGATTAAAAAAAACCTACTTGGCGAAAAAAACAGAGAACCTTGACGGCAGCGACAGCGTGAGGTGGAGACGGGAGGGCGACGGCG
GCGAGAGGTGGAGACGAGTTTTCGGCGGTAGCGTGAGGTGGAGACGGGAGGGCGGTGACGGCGAGATTGAAGTTAAATCTGAAAAAATGGGAAGTTGGGAACAAGCTTGA
Protein sequenceShow/hide protein sequence
MDANDSINEMFTRFTNIVNALKGLGKEYTTAKNVRKILRSLPKSWELKVTAIQEANDLSKLALEEFIGSLMMHKIIMKGNMEEDVKKKKRVTLKSTSFQGASESEEELAY
LSKSFKKHFKKRHFPKKTNTQDAKGEKNTRDVIICYECKKARHVRYECPPLRKSSLRRNKKAMKATLDESDEGSDFESAEEVANLCFMAFGDEDDDDENLQDDMGNTVIQ
KDDYDGEDLELDEDSLKEAYQSWEFVGTDGLENDDQPNPIGLGRVRLKKTYLAKKTENLDGSDSVRWRREGDGGERWRRVFGGSVRWRREGGDGEIEVKSEKMGSWEQA