; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g09810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:7281660..7282346
RNA-Seq ExpressionMoc04g09810
SyntenyMoc04g09810
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH02880.1 hypothetical protein Prudu_013587 [Prunus dulcis]5.6e-2538.92Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M D+DW  +D QA+  I+++LS  V+  +AKE T   LM AL   YEKPSA+ K+ L  + FN+ M EGA V  H+NE   +  +L  VGI+ DEEV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRA
         LL+SL +SW    T +S+S G N L F  + D  LSEE R++    S+T+S            +  G+ + NY G+ ++R +++
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRA

BBH05460.1 hypothetical protein Prudu_016848 [Prunus dulcis]5.6e-2538.92Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M D+DW  +D QA+  I+++LS  V+  +AKE T   LM AL   YEKPSA+ K+ L  + FN+ M EGA V  H+NE   +  +L  VGI+ DEEV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRA
         LL+SL +SW    T +S+S G N L F  + D  LSEE R++    S+T+S            +  G+ + NY G+ ++R +++
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRA

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]3.3e-2540.11Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M  ++W  +D Q +  I+++LS  V+  VAKE T + LMK L D YEKPSAN K+ L  K F++ MEEG  V +H+NEF  I+N+L  V I+ D+EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG
         LL SL +SW+ M+  +SNS+G+  LKF  + D  L EE R+            E  + SA  V+N+G+   N   + + R+   NG
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]3.3e-2539.13Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M  ++W  +D Q +  I+++LS  V+  VAKE T + LMK L D YEKPSAN K+ L  K F++ MEEG  V +H+NEF  I+N+L  V I+ D+EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTS--RAENR-VESAMVVQNKGKVKMNYTGKQQERNNRA----NGGLAGEW
         LL SL +SW+ M+  +SNS+G+  LKF  + D  L EE R+     ++T+S    ENR  +     QN+G+ K +  GK Q ++ +     N G  G +
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTS--RAENR-VESAMVVQNKGKVKMNYTGKQQERNNRA----NGGLAGEW

Query:  SVITVTR
          +  T+
Subjt:  SVITVTR

VDD56318.1 unnamed protein product [Brassica oleracea]1.5e-2542.7Show/hide
Query:  IDKD-WKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        +D+D W+ +D Q +  I+++LS  V+  VAKE T + LMK L D YEKPSAN K+ L  K F++ MEEG LV +H+NEF  I+N+L  V I+ ++EV+ +
Subjt:  IDKD-WKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYT-GKQQERNNR
         LL SL +SW+ M+  +SN +G   LKF  + D  L+EE R +++   A+TS A N       V+N+G+   N + GK + RN R
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYT-GKQQERNNR

TrEMBL top hitse value%identityAlignment
A0A0D3AEM1 CCHC-type domain-containing protein5.0e-2742.25Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M   +W+ +D Q +  I+++LS  V+  V KE T + LMK L D YEKPSAN+K+ L  K F++ MEEG LV +HINEF  I+N+L  V I+ ++EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG
         LL SL +SW+ M+  +SNS+G   LKF  + D  L+EE R +++   A+TS A N       V+N+        G+  +RNNR+NG
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG

A0A0D3BM55 Uncharacterized protein2.2e-2742.78Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M   +W+ +D Q +  I+++LS  V+  VAKE T + LMK L D YEKPSAN K+ L  K F++ MEEG LV +H+NEF  I+N+L  V I+ D+EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG
         LL SL +SW+ M+  +SNS+G   LKF  + D  L+EE R +++   A+TS A N       V+N+        G+  +RNNR+NG
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG

A0A0D3CS45 Uncharacterized protein3.2e-2641.71Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M   +W+ +D Q +  I+++LS  V+  VAKE   + LMK L D YEKPSAN K+ L  K F++ MEEG LV +H+NEF  I+N+L  V I+ ++EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG
         LL SL +SW+ M+  +SNS+G   LKF  + D  L+EE R +++   A+TS A N       V+N+        G+  +RNNR+NG
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG

A0A0D3DMW7 CCHC-type domain-containing protein3.2e-2640.11Show/hide
Query:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        M   +W+ +D Q +  I+++LS  V+  +AKE T + LMK L D YEKPS N K+ L  K F++ MEEG LV +H+NEF  I+N+L  V I+ D+EV+ +
Subjt:  MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG
         LL SL +SW+ M+  ++NS+G   LKF  + D  L+EE R+            E    SA  V+N+        G+  +RNNR+NG
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANG

A0A3P6FTI2 Abhydrolase_3 domain-containing protein7.2e-2642.7Show/hide
Query:  IDKD-WKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM
        +D+D W+ +D Q +  I+++LS  V+  VAKE T + LMK L D YEKPSAN K+ L  K F++ MEEG LV +H+NEF  I+N+L  V I+ ++EV+ +
Subjt:  IDKD-WKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVM

Query:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYT-GKQQERNNR
         LL SL +SW+ M+  +SN +G   LKF  + D  L+EE R +++   A+TS A N       V+N+G+   N + GK + RN R
Subjt:  RLLTSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYT-GKQQERNNR

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.2e-1128.04Show/hide
Query:  KDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVMRLL
        +DW ++DE+A + I++ LS  V + +  E T + +   L+  Y   +   K+ L  + + +HM EG    SH+N F  ++ +L  +G+KI+EE K + LL
Subjt:  KDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVMRLL

Query:  TSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANGGLAGE
         SL  S+  + TT+ +      LK  V     L+E+ RKK E               A++ + +G+        Q+  NN    G  G+
Subjt:  TSLLDSWKMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANGGLAGE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGACAAGGATTGGAAAGAGATGGATGAGCAGGCCGTTGCAAACATCAAGATGTCTTTATCGATGGGTGTATCTAGCGTTGTGGCGAAAGAGATGACTATGAAAAA
GCTGATGAAGGCCTTGCAAGACAGGTATGAGAAACCTTCTGCCAACACCAAAATACTTCTCTGGACGAAGTATTTCAATATCCACATGGAGGAGGGAGCCTTGGTAAATT
CCCACATTAATGAGTTCACCGACATATTGAACAAACTAGAAGGGGTGGGTATCAAGATCGATGAGGAGGTGAAGGTTATGAGACTGCTAACATCTTTGCTTGACAGTTGG
AAGATGATGAAGACCACGATGTCGAATTCGTTGGGAGATAATAGTCTGAAATTTGCAGTTATTTGTGATGCTGCCTTATCTGAGGAAACCCGAAAGAAATTGGAGAAAAT
GTCTGCAACTACTTCAAGGGCAGAAAATAGGGTTGAATCAGCTATGGTAGTTCAGAACAAGGGGAAAGTCAAGATGAATTACACAGGGAAGCAGCAAGAGAGAAATAACA
GGGCTAATGGGGGTTTAGCGGGGGAGTGGAGTGTTATTACTGTCACAAGAAGGGACACATTAAACGTTTTTGCAGGAAGTTCAAAGAAGAGTTTGAGAAGGGGAACAACA
CATCAAATAGGAATGCTGGTACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGACAAGGATTGGAAAGAGATGGATGAGCAGGCCGTTGCAAACATCAAGATGTCTTTATCGATGGGTGTATCTAGCGTTGTGGCGAAAGAGATGACTATGAAAAA
GCTGATGAAGGCCTTGCAAGACAGGTATGAGAAACCTTCTGCCAACACCAAAATACTTCTCTGGACGAAGTATTTCAATATCCACATGGAGGAGGGAGCCTTGGTAAATT
CCCACATTAATGAGTTCACCGACATATTGAACAAACTAGAAGGGGTGGGTATCAAGATCGATGAGGAGGTGAAGGTTATGAGACTGCTAACATCTTTGCTTGACAGTTGG
AAGATGATGAAGACCACGATGTCGAATTCGTTGGGAGATAATAGTCTGAAATTTGCAGTTATTTGTGATGCTGCCTTATCTGAGGAAACCCGAAAGAAATTGGAGAAAAT
GTCTGCAACTACTTCAAGGGCAGAAAATAGGGTTGAATCAGCTATGGTAGTTCAGAACAAGGGGAAAGTCAAGATGAATTACACAGGGAAGCAGCAAGAGAGAAATAACA
GGGCTAATGGGGGTTTAGCGGGGGAGTGGAGTGTTATTACTGTCACAAGAAGGGACACATTAAACGTTTTTGCAGGAAGTTCAAAGAAGAGTTTGAGAAGGGGAACAACA
CATCAAATAGGAATGCTGGTACAATGA
Protein sequenceShow/hide protein sequence
MIDKDWKEMDEQAVANIKMSLSMGVSSVVAKEMTMKKLMKALQDRYEKPSANTKILLWTKYFNIHMEEGALVNSHINEFTDILNKLEGVGIKIDEEVKVMRLLTSLLDSW
KMMKTTMSNSLGDNSLKFAVICDAALSEETRKKLEKMSATTSRAENRVESAMVVQNKGKVKMNYTGKQQERNNRANGGLAGEWSVITVTRRDTLNVFAGSSKKSLRRGTT
HQIGMLVQ