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Moc04g09910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:7353905..7354834
RNA-Seq ExpressionMoc04g09910
SyntenyMoc04g09910
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]6.6e-4164.14Show/hide
Query:  MPRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREF-----------------------------------------------LGHDIAGLTPLESDV
        M RVFITFGGEW DSEKDYV GRT+GLTVDSTTTYREF                                               LGHDIAGLTPLESDV
Subjt:  MPRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREF-----------------------------------------------LGHDIAGLTPLESDV

Query:  VLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        V CNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
Subjt:  VLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]1.4e-3562.69Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTT--------------------------------------YREFLGHDIAGLTPLESDVVLCNLGDDRVC
        RVFITFGGEWNDSEKDYVGGR RGLTVDS                                         Y   LGHDIAGLTPLESDVV CNLGDDRVC
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTT--------------------------------------YREFLGHDIAGLTPLESDVVLCNLGDDRVC

Query:  DWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
         WN+PGLWNDNQDESDESYD LG+SEEGDYEAEF
Subjt:  DWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]5.0e-1271.43Show/hide
Query:  ESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        + +VV CNLGDDRVCDW+VPG+WNDN+DES ESYDPL ES+EG  +AE+
Subjt:  ESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]4.6e-1876.27Show/hide
Query:  GHDIAGLTPLESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        GHD+ GLTPL SDVV CNLGDDRVCDW+VPG+WNDN+DES ESYDPL  SEEG  +AE+
Subjt:  GHDIAGLTPLESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

TrEMBL top hitse value%identityAlignment
A0A6J1DN26 uncharacterized protein LOC1110220903.2e-4164.14Show/hide
Query:  MPRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREF-----------------------------------------------LGHDIAGLTPLESDV
        M RVFITFGGEW DSEKDYV GRT+GLTVDSTTTYREF                                               LGHDIAGLTPLESDV
Subjt:  MPRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREF-----------------------------------------------LGHDIAGLTPLESDV

Query:  VLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        V CNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
Subjt:  VLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

A0A6J1DP00 uncharacterized protein LOC1110229546.9e-3662.69Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTT--------------------------------------YREFLGHDIAGLTPLESDVVLCNLGDDRVC
        RVFITFGGEWNDSEKDYVGGR RGLTVDS                                         Y   LGHDIAGLTPLESDVV CNLGDDRVC
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTT--------------------------------------YREFLGHDIAGLTPLESDVVLCNLGDDRVC

Query:  DWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
         WN+PGLWNDNQDESDESYD LG+SEEGDYEAEF
Subjt:  DWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

A0A6J1DQB9 Reverse transcriptase2.4e-1271.43Show/hide
Query:  ESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        + +VV CNLGDDRVCDW+VPG+WNDN+DES ESYDPL ES+EG  +AE+
Subjt:  ESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

A0A6J1DTG5 uncharacterized protein LOC1110238432.2e-1876.27Show/hide
Query:  GHDIAGLTPLESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF
        GHD+ GLTPL SDVV CNLGDDRVCDW+VPG+WNDN+DES ESYDPL  SEEG  +AE+
Subjt:  GHDIAGLTPLESDVVLCNLGDDRVCDWNVPGLWNDNQDESDESYDPLGESEEGDYEAEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCCCGGACAAATCCAGGTTCAATCCCGGATCGAAAGATGGTTCGGGAGTGAACCGGGATACATCCCGGACCAATCTCGAAGCACTGTGGTCCGGGATATGTC
TCGGACCAAGACTGGTCCGAGACGGATGCCTCGTGTTTTCATAACATTTGGTGGAGAATGGAATGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAG
TGGATAGTACAACCACATACAGAGAATTTCTAGGTCATGATATAGCGGGTTTAACACCATTGGAATCAGATGTTGTTCTATGTAACCTAGGAGATGACAGGGTATGTGAT
TGGAATGTGCCGGGATTATGGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCGTTGGGAGAGTCAGAAGAAGGAGACTATGAAGCAGAATTCTGTCTTCCATC
CCGGACCTTATCCCGGACCATTTCGCCTTCGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATCCCGGACAAATCCAGGTTCAATCCCGGATCGAAAGATGGTTCGGGAGTGAACCGGGATACATCCCGGACCAATCTCGAAGCACTGTGGTCCGGGATATGTC
TCGGACCAAGACTGGTCCGAGACGGATGCCTCGTGTTTTCATAACATTTGGTGGAGAATGGAATGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAG
TGGATAGTACAACCACATACAGAGAATTTCTAGGTCATGATATAGCGGGTTTAACACCATTGGAATCAGATGTTGTTCTATGTAACCTAGGAGATGACAGGGTATGTGAT
TGGAATGTGCCGGGATTATGGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCGTTGGGAGAGTCAGAAGAAGGAGACTATGAAGCAGAATTCTGTCTTCCATC
CCGGACCTTATCCCGGACCATTTCGCCTTCGGGATGA
Protein sequenceShow/hide protein sequence
MFNPGQIQVQSRIERWFGSEPGYIPDQSRSTVVRDMSRTKTGPRRMPRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHDIAGLTPLESDVVLCNLGDDRVCD
WNVPGLWNDNQDESDESYDPLGESEEGDYEAEFCLPSRTLSRTISPSG