; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g09940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g09940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:7389248..7391975
RNA-Seq ExpressionMoc04g09940
SyntenyMoc04g09940
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131678.1 uncharacterized protein LOC111004795 [Momordica charantia]1.4e-1670.83Show/hide
Query:  ESAEEVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDID--GILP
        E    VKDQL  FSKYE  QIP +QNVN +ALARLAAT ETGLGRTVPVEILPEPSI+ Q+ MD+D  G+LP
Subjt:  ESAEEVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDID--GILP

XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]2.5e-1872.37Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEIRQIP  QNVN DALARLA TYET LGRTVPVEIL  PSIEAQEAMDID     E ++ S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]6.7e-1972.37Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEI QIP  QNV+ DALARLAA YET LGRTVPVEILPEPSIEAQEAMDID     E +  S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]9.7e-1869.86Show/hide
Query:  MNPGESQQCFEKKSLNEAADHSGEARPSPDHRLKSPTLNRGEPASSLNEATDHSGEARPSPGHRLNSTTLDKG
        MNP ES +CFE+KSL +AADH  EARPSPD +L   TL+ GEP S LN+ATD SG+ARPSPG+RLN TTLDKG
Subjt:  MNPGESQQCFEKKSLNEAADHSGEARPSPDHRLKSPTLNRGEPASSLNEATDHSGEARPSPGHRLNSTTLDKG

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]1.5e-1871.05Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEIRQIP  QNVN D LARLA  YET LGRTVPVEILP PSIEAQEAMDID     E ++ S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]4.3e-1870.67Show/hide
Query:  VKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        VKDQL QFSK+EIRQIPCTQNVN DALARLAA Y T LGRT+ VEIL EPSI+AQE MDID    +E ++ S L+
Subjt:  VKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

TrEMBL top hitse value%identityAlignment
A0A6J1BU48 uncharacterized protein LOC1110047956.8e-1770.83Show/hide
Query:  ESAEEVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDID--GILP
        E    VKDQL  FSKYE  QIP +QNVN +ALARLAAT ETGLGRTVPVEILPEPSI+ Q+ MD+D  G+LP
Subjt:  ESAEEVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDID--GILP

A0A6J1DJC7 Ribonuclease H1.2e-1872.37Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEIRQIP  QNVN DALARLA TYET LGRTVPVEIL  PSIEAQEAMDID     E ++ S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

A0A6J1DVC6 Ribonuclease H7.2e-1972.37Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEI QIP  QNV+ DALARLAA YET LGRTVPVEILPEPSIEAQEAMDID     E +  S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

A0A6J1DVC6 Ribonuclease H4.7e-1869.86Show/hide
Query:  MNPGESQQCFEKKSLNEAADHSGEARPSPDHRLKSPTLNRGEPASSLNEATDHSGEARPSPGHRLNSTTLDKG
        MNP ES +CFE+KSL +AADH  EARPSPD +L   TL+ GEP S LN+ATD SG+ARPSPG+RLN TTLDKG
Subjt:  MNPGESQQCFEKKSLNEAADHSGEARPSPDHRLKSPTLNRGEPASSLNEATDHSGEARPSPGHRLNSTTLDKG

A0A6J1DVC6 Ribonuclease H7.2e-1971.05Show/hide
Query:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        +V++QLDQFSKYEIRQIP  QNVN D LARLA  YET LGRTVPVEILP PSIEAQEAMDID     E ++ S L+
Subjt:  EVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

A0A6J1E1Q5 uncharacterized protein LOC1110256232.1e-1870.67Show/hide
Query:  VKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL
        VKDQL QFSK+EIRQIPCTQNVN DALARLAA Y T LGRT+ VEIL EPSI+AQE MDID    +E ++ S L+
Subjt:  VKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAAGACGACACGGCGCCGAGGCCATCACGGCGTCGAGGCGCCGACCCCACCTTGGCGCCGAGGTGTCTGCTTCTCACCTTGGCCTTCGAGCCAAGAGTGGAGCA
AGACGACATGAATCCTGGTGAGAGTCAGCAGTGTTTCGAAAAGAAGAGCCTGAATGAAGCGGCCGACCACTCAGGTGAGGCGAGACCGAGCCCTGATCATCGACTTAAAT
CACCTACCCTTAACAGGGGAGAACCGGCTTCGAGCCTGAATGAAGCGACCGACCACTCGGGTGAGGCAAGACCGAGCCCCGGTCATCGACTTAATTCGACCACCCTTGAC
AAGGGAGAATCGGCTGAAGAGGTAAAAGACCAGCTCGACCAGTTCTCAAAATATGAGATTCGACAAATTCCATGTACTCAAAACGTCAATGTAGATGCGTTAGCTCGACT
AGCTGCAACTTATGAAACTGGCTTAGGAAGAACTGTACCAGTCGAGATTCTGCCCGAGCCAAGCATAGAAGCTCAAGAAGCAATGGATATCGACGGGATTCTGCCTACTG
AAACTCACTATTTCTCAACTCTCCTTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAAGACGACACGGCGCCGAGGCCATCACGGCGTCGAGGCGCCGACCCCACCTTGGCGCCGAGGTGTCTGCTTCTCACCTTGGCCTTCGAGCCAAGAGTGGAGCA
AGACGACATGAATCCTGGTGAGAGTCAGCAGTGTTTCGAAAAGAAGAGCCTGAATGAAGCGGCCGACCACTCAGGTGAGGCGAGACCGAGCCCTGATCATCGACTTAAAT
CACCTACCCTTAACAGGGGAGAACCGGCTTCGAGCCTGAATGAAGCGACCGACCACTCGGGTGAGGCAAGACCGAGCCCCGGTCATCGACTTAATTCGACCACCCTTGAC
AAGGGAGAATCGGCTGAAGAGGTAAAAGACCAGCTCGACCAGTTCTCAAAATATGAGATTCGACAAATTCCATGTACTCAAAACGTCAATGTAGATGCGTTAGCTCGACT
AGCTGCAACTTATGAAACTGGCTTAGGAAGAACTGTACCAGTCGAGATTCTGCCCGAGCCAAGCATAGAAGCTCAAGAAGCAATGGATATCGACGGGATTCTGCCTACTG
AAACTCACTATTTCTCAACTCTCCTTTGCTAA
Protein sequenceShow/hide protein sequence
MPKDDTAPRPSRRRGADPTLAPRCLLLTLAFEPRVEQDDMNPGESQQCFEKKSLNEAADHSGEARPSPDHRLKSPTLNRGEPASSLNEATDHSGEARPSPGHRLNSTTLD
KGESAEEVKDQLDQFSKYEIRQIPCTQNVNVDALARLAATYETGLGRTVPVEILPEPSIEAQEAMDIDGILPTETHYFSTLLC