; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g10030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:7442815..7446430
RNA-Seq ExpressionMoc04g10030
SyntenyMoc04g10030
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]9.6e-8253.45Show/hide
Query:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL
        DYL  K+L  PL  KP+ M + +W  LDR+VLG I LTL+KNV  +VAKE T  GLM  LS++YEKPS NNKV+L    F+LKM+EG  VA H+NEF+T+
Subjt:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL

Query:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCG--KSRNNKNKS
        +N+L  V++ F DE+ A++L+  LP+SWEPM+AA+SNS G +KLKF DVRD  LGEE+RR D+G TSTS      +RGR+ NR +   G  KSRN K +S
Subjt:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCG--KSRNNKNKS

Query:  TNSR-LECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVES-----THNT------------------WVVDSGASFHTTGQRDILENY
         + + +ECWNCGKTGH K NC A PKK   K  GAN V +EI  AL+++V+S     TH+T                  WV+DSGASFHTT  R+I+ENY
Subjt:  TNSR-LECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVES-----THNT------------------WVVDSGASFHTTGQRDILENY

Query:  VAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV
        V GN+   YLA+G PLDI+GIGD+NLKM+ G V
Subjt:  VAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.1e-8153.75Show/hide
Query:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL
        DYL  K+L  PL  KP+ M + +W  LDR+VLG I LTL+KNV  +VAKE T  GLM  LS++YEKPS NNKV+L    F+LKM+EG  VA H+NEF+T+
Subjt:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL

Query:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCG--KSRNNKNKS
        +N+L  V++ F DE+ A++LL  LP+SWEPM+AA+SNS G +KLKF DVRD  LGEE+RR D+G TS S      +RGR+ NR +   G  KSRN K +S
Subjt:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCG--KSRNNKNKS

Query:  TNSR-LECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVES-----THNT------------------WVVDSGASFHTTGQRDILENY
         + + +ECWNCGKTGH K NC A PKK   K  GAN V +EI  AL++ V+S     TH+T                  WV+DSGASFHTT  R+I+ENY
Subjt:  TNSR-LECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVES-----THNT------------------WVVDSGASFHTTGQRDILENY

Query:  VAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV
        VAGN+   YLA+G PLDI+GIGD+NLKM+ G V
Subjt:  VAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV

PON60333.1 Zinc finger, CCHC-type [Parasponia andersonii]9.2e-8555.45Show/hide
Query:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT
        DYL +K+L  PL  KKP+ ME+  W+ LDR+VLG I LTLTKNV  +VA+  T   +MS LS++YEKPS NNKV+L    F LKM EG SVA HINEF+T
Subjt:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT

Query:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK
        ++++L  V++ F +E+ A++LL  LP SWEPM+AA+SNS GKEKL+F DVRD  L EE+RR DSG  ++S + LN+   DR    N + G+   KSRN +
Subjt:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK

Query:  NKS-TNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI
        NKS +  R+ECWNCGKTGH+K+NC+AP+K + +   AN + +E+  AL+L+V++  ++WV+DSGASFHTT  RD+LENY+AGN+   YLADGEPLDI+G+
Subjt:  NKS-TNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI

Query:  GDVNLKMAKGSV
        GD+ LKM+ GSV
Subjt:  GDVNLKMAKGSV

PON63051.1 Zinc finger, CCHC-type [Trema orientale]9.6e-8255.45Show/hide
Query:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT
        DYL SK+L  PL  KKP+ ME+  W+  DR+VLG I LTLTKNV  +VA+  T   +MS LS+IYEK S NNKVYL    F LKM EG SVA HINEF+T
Subjt:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT

Query:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK
        ++++L  V++ F DE+ A++LL  LP SWE M+AA+SNS GK KL+F DVRD  L EE+RR DSG  ++S + LN+   DR    N + G+   KSRN +
Subjt:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK

Query:  NKSTNSRL-ECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI
        +KS + R  ECWNCGKTGH+K+NC+AP+K + +   AN V +E+  AL+L+V++  ++WV+DSGASFHTT  R++LENYVAGN+   YLADGEPLDI+G+
Subjt:  NKSTNSRL-ECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI

Query:  GDVNLKMAKGSV
        GD+ LKM+ GSV
Subjt:  GDVNLKMAKGSV

XP_022152845.1 uncharacterized protein LOC111020469 [Momordica charantia]5.4e-10970.89Show/hide
Query:  DDTHIVSNPVDYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSV
        +D H     +DYL SKELE PL+ KPDDM E +WKKLDRKVLGTI LTLTKNVQSSVAK TT MGLM+AL+N+YEK S NNKVYLAT FFNLKM E T +
Subjt:  DDTHIVSNPVDYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSV

Query:  AAHINEFDTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCGK
         AH+NEFD LINKLV VDL F+ E+ AILLL  LPDSWEPM+AAISNSC KEKLKF DVRDAAL EEIRRKDSGI  TSG+ LNVDRGRNNNR +G  GK
Subjt:  AAHINEFDTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCGK

Query:  SRNNKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLD
        S+NN+++S NSR ECWNCGK GHLK NCKAPKK EG EA AN VAE+IH ALV+AVES H+TWV+DS                  GNH   YLADGEPLD
Subjt:  SRNNKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLD

Query:  IIGIGDVNLKMAKGSV
        IIGIG+VNLKMA GSV
Subjt:  IIGIGDVNLKMAKGSV

TrEMBL top hitse value%identityAlignment
A0A0D3CS45 Uncharacterized protein2.7e-8253.29Show/hide
Query:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL
        DYL  K+L  PL KKP+ M++ +W+ LDR+VLG I LTL+KNV  +VAKE    GLM  LS++YEKPS NNKV+L    F+LKM+EG  VAAH+NEF+T+
Subjt:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDTL

Query:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRN---NNRDHGKCGKSRNNKNK
        +N+L  V++ F DE+ A++LL  LP+SWEPM+AA+SNS G +KLKF DVRD  L EE+RR DSG  STS      +RGRN   NNR +G+  KSRN + +
Subjt:  INKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRN---NNRDHGKCGKSRNNKNK

Query:  ST-NSRLECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVESTH-----------------------NTWVVDSGASFHTTGQRDILEN
        S      ECWNCGKTGH+K+NC+A PKK +    GAN V  EI  ALV++V+S                         ++WV+DSGASFHTT   +I+EN
Subjt:  ST-NSRLECWNCGKTGHLKRNCKA-PKKAEGKEAGANVVAEEIHYALVLAVESTH-----------------------NTWVVDSGASFHTTGQRDILEN

Query:  YVAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV
        YVAGN+   YLADG PLDI+GIGD+NLKM+ G V
Subjt:  YVAGNHRNAYLADGEPLDIIGIGDVNLKMAKGSV

A0A2N9IKI1 Uncharacterized protein6.7e-8153.7Show/hide
Query:  DYLQSKELELP-LDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT
        DYL  K+L LP L +KP+DME+ +W  LDR+VLG I LTL++ V  +V KE T   LM+AL  +YEKPS NNKV+L    FNLKM EGT+VA H+NEF+T
Subjt:  DYLQSKELELP-LDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT

Query:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVD---RGRNNNRDHGKCGKSRNNKN
        + N+L  V++ F DE+ A+++L  LP+SWE M+ A+SNS GK KLK+ D+RD  LGEE+RR+D+G TS+SG+ LN++   RG++ N + G+  KSR  ++
Subjt:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVD---RGRNNNRDHGKCGKSRNNKN

Query:  KSTNSR-LECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGIG
        KS   R LECWNCGKTGH+++NC   KK + +   ANVV EE+H AL+L+V+S   +WV+DSGASFHTT  R+I++NYVAG+    YLAD E LD++G+G
Subjt:  KSTNSR-LECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGIG

Query:  DVNLKMAKGSV
        DV + +  GSV
Subjt:  DVNLKMAKGSV

A0A2P5CH01 Zinc finger, CCHC-type4.5e-8555.45Show/hide
Query:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT
        DYL +K+L  PL  KKP+ ME+  W+ LDR+VLG I LTLTKNV  +VA+  T   +MS LS++YEKPS NNKV+L    F LKM EG SVA HINEF+T
Subjt:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT

Query:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK
        ++++L  V++ F +E+ A++LL  LP SWEPM+AA+SNS GKEKL+F DVRD  L EE+RR DSG  ++S + LN+   DR    N + G+   KSRN +
Subjt:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK

Query:  NKS-TNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI
        NKS +  R+ECWNCGKTGH+K+NC+AP+K + +   AN + +E+  AL+L+V++  ++WV+DSGASFHTT  RD+LENY+AGN+   YLADGEPLDI+G+
Subjt:  NKS-TNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI

Query:  GDVNLKMAKGSV
        GD+ LKM+ GSV
Subjt:  GDVNLKMAKGSV

A0A2P5CPV0 Zinc finger, CCHC-type4.6e-8255.45Show/hide
Query:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT
        DYL SK+L  PL  KKP+ ME+  W+  DR+VLG I LTLTKNV  +VA+  T   +MS LS+IYEK S NNKVYL    F LKM EG SVA HINEF+T
Subjt:  DYLQSKELELPLD-KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEFDT

Query:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK
        ++++L  V++ F DE+ A++LL  LP SWE M+AA+SNS GK KL+F DVRD  L EE+RR DSG  ++S + LN+   DR    N + G+   KSRN +
Subjt:  LINKLVVVDLTFTDELNAILLLI-LPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNV---DRGRNNNRDHGK-CGKSRNNK

Query:  NKSTNSRL-ECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI
        +KS + R  ECWNCGKTGH+K+NC+AP+K + +   AN V +E+  AL+L+V++  ++WV+DSGASFHTT  R++LENYVAGN+   YLADGEPLDI+G+
Subjt:  NKSTNSRL-ECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGI

Query:  GDVNLKMAKGSV
        GD+ LKM+ GSV
Subjt:  GDVNLKMAKGSV

A0A6J1DF43 uncharacterized protein LOC1110204692.6e-10970.89Show/hide
Query:  DDTHIVSNPVDYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSV
        +D H     +DYL SKELE PL+ KPDDM E +WKKLDRKVLGTI LTLTKNVQSSVAK TT MGLM+AL+N+YEK S NNKVYLAT FFNLKM E T +
Subjt:  DDTHIVSNPVDYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSV

Query:  AAHINEFDTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCGK
         AH+NEFD LINKLV VDL F+ E+ AILLL  LPDSWEPM+AAISNSC KEKLKF DVRDAAL EEIRRKDSGI  TSG+ LNVDRGRNNNR +G  GK
Subjt:  AAHINEFDTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCGK

Query:  SRNNKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLD
        S+NN+++S NSR ECWNCGK GHLK NCKAPKK EG EA AN VAE+IH ALV+AVES H+TWV+DS                  GNH   YLADGEPLD
Subjt:  SRNNKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLD

Query:  IIGIGDVNLKMAKGSV
        IIGIG+VNLKMA GSV
Subjt:  IIGIGDVNLKMAKGSV

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.8e-3032Show/hide
Query:  DYLQSKELELPLD---KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEF
        D L  + L   LD   KKPD M+   W  LD +    I L L+ +V +++  E TA G+ + L ++Y   +  NK+YL    + L M EGT+  +H+N F
Subjt:  DYLQSKELELPLD---KKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLKMDEGTSVAAHINEF

Query:  DTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDA-ALGEEIRRKDSG---ITSTSGTTLNVDRGRNNNRDHGKCGKSRN
        + LI +L  + +   +E  AILLL  LP S++ +   I +  GK  ++  DV  A  L E++R+K         T G   +  R  NN   +G+ G    
Subjt:  DTLINKLVVVDLTFTDELNAILLL-ILPDSWEPMKAAISNSCGKEKLKFADVRDA-ALGEEIRRKDSG---ITSTSGTTLNVDRGRNNNRDHGKCGKSRN

Query:  NKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAG-------ANVVAEEIHYALVLAVE-------STHNTWVVDSGASFHTTGQRDILENYVAGNHR
        +KN+S +    C+NC + GH KR+C  P+K +G+ +G       A +V    +  L +  E          + WVVD+ AS H T  RD+   YVAG+  
Subjt:  NKNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAG-------ANVVAEEIHYALVLAVE-------STHNTWVVDSGASFHTTGQRDILENYVAGNHR

Query:  NAYLADGEPLDIIGIGDVNLKMAKG
           + +     I GIGD+ +K   G
Subjt:  NAYLADGEPLDIIGIGDVNLKMAKG

Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein2.5e-1150.68Show/hide
Query:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKV
        DYL  K+L  PL KK + M +  W  L R+VL  I LT++KN+  +VAKE +  GLM  LS+IY+KPS NN V
Subjt:  DYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCGCGAGACATCTCACTGATGACACGCCACCAGAAGAATACGTTGATGATACTCACATAGTTAGCAACCCAGTAGATTATCTACAATCCAAGGAATTGGAACT
GCCATTAGACAAGAAGCCAGATGACATGGAAGAAGTCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACGATTTGCCTAACATTAACAAAAAATGTGCAGAGCAGCG
TAGCTAAGGAGACTACCGCAATGGGGCTGATGAGTGCACTGTCCAACATATATGAGAAGCCCTCGGAAAATAATAAAGTGTATCTCGCAACTAATTTTTTTAATTTGAAG
ATGGATGAAGGTACATCTGTGGCTGCCCATATAAATGAATTTGATACGTTGATTAACAAACTAGTTGTTGTGGATTTAACATTTACGGATGAATTAAATGCTATCTTGTT
GTTGATCTTACCTGACAGTTGGGAGCCTATGAAGGCAGCTATTTCAAATTCTTGTGGAAAAGAGAAATTGAAATTCGCAGATGTCAGAGATGCAGCTCTTGGAGAGGAGA
TTCGCAGAAAGGATTCTGGTATTACGTCTACTTCTGGTACAACATTGAATGTGGACAGAGGAAGAAATAATAACAGAGACCACGGAAAATGTGGAAAGTCAAGAAACAAC
AAAAACAAGTCTACAAACAGTAGGCTAGAATGTTGGAATTGTGGTAAGACAGGACATCTGAAGAGGAACTGCAAAGCTCCAAAGAAAGCTGAGGGGAAAGAAGCTGGTGC
AAATGTTGTTGCTGAAGAAATACATTATGCTCTAGTTCTTGCAGTTGAGAGCACTCATAACACATGGGTGGTGGATTCAGGTGCGTCTTTTCACACTACAGGACAACGTG
ACATTCTTGAGAATTATGTTGCAGGAAATCATAGAAATGCGTATCTTGCTGATGGAGAGCCTTTGGACATCATTGGGATTGGTGACGTTAATTTAAAAATGGCGAAGGGT
TCAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCGCGAGACATCTCACTGATGACACGCCACCAGAAGAATACGTTGATGATACTCACATAGTTAGCAACCCAGTAGATTATCTACAATCCAAGGAATTGGAACT
GCCATTAGACAAGAAGCCAGATGACATGGAAGAAGTCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACGATTTGCCTAACATTAACAAAAAATGTGCAGAGCAGCG
TAGCTAAGGAGACTACCGCAATGGGGCTGATGAGTGCACTGTCCAACATATATGAGAAGCCCTCGGAAAATAATAAAGTGTATCTCGCAACTAATTTTTTTAATTTGAAG
ATGGATGAAGGTACATCTGTGGCTGCCCATATAAATGAATTTGATACGTTGATTAACAAACTAGTTGTTGTGGATTTAACATTTACGGATGAATTAAATGCTATCTTGTT
GTTGATCTTACCTGACAGTTGGGAGCCTATGAAGGCAGCTATTTCAAATTCTTGTGGAAAAGAGAAATTGAAATTCGCAGATGTCAGAGATGCAGCTCTTGGAGAGGAGA
TTCGCAGAAAGGATTCTGGTATTACGTCTACTTCTGGTACAACATTGAATGTGGACAGAGGAAGAAATAATAACAGAGACCACGGAAAATGTGGAAAGTCAAGAAACAAC
AAAAACAAGTCTACAAACAGTAGGCTAGAATGTTGGAATTGTGGTAAGACAGGACATCTGAAGAGGAACTGCAAAGCTCCAAAGAAAGCTGAGGGGAAAGAAGCTGGTGC
AAATGTTGTTGCTGAAGAAATACATTATGCTCTAGTTCTTGCAGTTGAGAGCACTCATAACACATGGGTGGTGGATTCAGGTGCGTCTTTTCACACTACAGGACAACGTG
ACATTCTTGAGAATTATGTTGCAGGAAATCATAGAAATGCGTATCTTGCTGATGGAGAGCCTTTGGACATCATTGGGATTGGTGACGTTAATTTAAAAATGGCGAAGGGT
TCAGTCTAG
Protein sequenceShow/hide protein sequence
MGIARHLTDDTPPEEYVDDTHIVSNPVDYLQSKELELPLDKKPDDMEEVKWKKLDRKVLGTICLTLTKNVQSSVAKETTAMGLMSALSNIYEKPSENNKVYLATNFFNLK
MDEGTSVAAHINEFDTLINKLVVVDLTFTDELNAILLLILPDSWEPMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGITSTSGTTLNVDRGRNNNRDHGKCGKSRNN
KNKSTNSRLECWNCGKTGHLKRNCKAPKKAEGKEAGANVVAEEIHYALVLAVESTHNTWVVDSGASFHTTGQRDILENYVAGNHRNAYLADGEPLDIIGIGDVNLKMAKG
SV