CuGenDBv2

Gene ID	Moc04g10060
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	syntaxin-43-like
Genome location	chr4:7462095..7463876
RNA-Seq Expression	Moc04g10060
Synteny	Moc04g10060
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0051641 - cellular localization (biological process) GO:0061025 - membrane fusion (biological process) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6599198.1 Syntaxin-43, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-16

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

KAG7030133.1 Syntaxin-43, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-16

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

XP_022999413.1 syntaxin-43-like [Cucurbita maxima]

1.1e-16

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

XP_023522691.1 syntaxin-41-like, partial [Cucurbita pepo subsp. pepo]

1.1e-16

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

XP_023545297.1 syntaxin-43-like [Cucurbita pepo subsp. pepo]

1.1e-16

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLY7 t-SNARE coiled-coil homology domain-containing protein

3.4e-16

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQC
        MASRN+TLLF+KYRDALRSVR PTSSS   ASP TSS  GGP+IEL                          A TVGLPPAWV+VSEEIAANVQC
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQC

A0A5A7U3M4 Syntaxin-43

4.4e-16

60.64

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TLLF+KYRDALRSVR PTSSS  SASP TSS  GGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

A0A6J1DTG3 syntaxin-41-like

1.5e-16

45.91

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYLD
        MASRN+TLLFRKYRDALRSVRAPTSSS VSASP TSSG GGP+IEL                          AHTVGLPPAWV+VSEEIAANVQ      
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYLD

Query:  IHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA
            +A  K   + ++   AL  +    K  Q   +    + +HL +K +K  +++  A
Subjt:  IHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA

A0A6J1G576 syntaxin-43-like

5.2e-17

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

A0A6J1KJM9 syntaxin-43-like

5.2e-17

61.7

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ
        MASRN+TL+FRKYRDALRSVR PT SS  SASP TSSGTGGP+IEL                          A TVGLPPAWV+VSEEIAANVQ
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL-------------------------SAHTVGLPPAWVEVSEEIAANVQ

SwissProt top hits

e value

%identity

Alignment

O65359 Syntaxin-41

3.7e-12

48.94

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ
        MA+RN+TLLFRKYR++LRSVRAP SSS ++    T SG  GP+IE++                         A TVGLPPAWV+VSEEI+ N+Q
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ

Q9SUJ1 Syntaxin-43

2.6e-05

32.32

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH-------------------------TVGLPPAWVEVSEEIAANVQC
        MA+RN+TLLFRKYR++LRSVRAP  SS  S     +S TG     GP+IE+++                          TVGLPP WV+VSEEI+  +Q 
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH-------------------------TVGLPPAWVEVSEEIAANVQC

Query:  DPYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA
                 +A  K   + ++   AL  +    K  Q+  +    + + L +K +K+ +++  A
Subjt:  DPYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA

Q9SWH4 Syntaxin-42

1.3e-04

31.37

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL--------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYL
        MA+RN+T ++RK+RDA +S RAP S S        S   GGP+IE+                           A T+G+PPAWV+ SEEI  N+Q     
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL--------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYL

Query:  DIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKR
             K  DK N + ++   AL  T    K      +    + + L +K +KR
Subjt:  DIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKR

Arabidopsis top hits

e value

%identity

Alignment

AT3G05710.1 syntaxin of plants 43

1.4e-06

32.52

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH------------------------TVGLPPAWVEVSEEIAANVQCD
        MA+RN+TLLFRKYR++LRSVRAP  SS  S     +S TG     GP+IE+++                         TVGLPP WV+VSEEI+  +Q  
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH------------------------TVGLPPAWVEVSEEIAANVQCD

Query:  PYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA
                +A  K   + ++   AL  +    K  Q+  +    + + L +K +K+ +++  A
Subjt:  PYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA

AT3G05710.2 syntaxin of plants 43

1.8e-06

32.32

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH-------------------------TVGLPPAWVEVSEEIAANVQC
        MA+RN+TLLFRKYR++LRSVRAP  SS  S     +S TG     GP+IE+++                          TVGLPP WV+VSEEI+  +Q 
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTG-----GPMIELSAH-------------------------TVGLPPAWVEVSEEIAANVQC

Query:  DPYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA
                 +A  K   + ++   AL  +    K  Q+  +    + + L +K +K+ +++  A
Subjt:  DPYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKRRRKMKMA

AT4G02195.1 syntaxin of plants 42

9.1e-06

31.37

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL--------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYL
        MA+RN+T ++RK+RDA +S RAP S S        S   GGP+IE+                           A T+G+PPAWV+ SEEI  N+Q     
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIEL--------------------------SAHTVGLPPAWVEVSEEIAANVQCDPYL

Query:  DIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKR
             K  DK N + ++   AL  T    K      +    + + L +K +KR
Subjt:  DIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAKKRRKSKESHLTQKMKKR

AT5G26980.1 syntaxin of plants 41

2.6e-13

48.94

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ
        MA+RN+TLLFRKYR++LRSVRAP SSS ++    T SG  GP+IE++                         A TVGLPPAWV+VSEEI+ N+Q
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ

AT5G26980.2 syntaxin of plants 41

2.6e-13

48.94

Show/hide

Query:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ
        MA+RN+TLLFRKYR++LRSVRAP SSS ++    T SG  GP+IE++                         A TVGLPPAWV+VSEEI+ N+Q
Subjt:  MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELS-------------------------AHTVGLPPAWVEVSEEIAANVQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTCGAGGAATCAGACTTTGCTTTTTAGGAAATACAGGGACGCCTTGAGAAGTGTGAGGGCTCCTACCAGCTCTTCACTAGTTTCGGCATCGCCACCGACTAGTTC
TGGCACTGGTGGTCCGATGATTGAATTGAGTGCTCATACCGTGGGTCTGCCTCCAGCTTGGGTTGAAGTATCCGAAGAAATAGCTGCAAATGTGCAATGTGACCCTTATC
TTGATATACACGACGGCAAAGCTACTGATAAAGAGAATGCAGTAGTGGAAAGTAAAGTTTCGGCTCTTAAGCAAACTCCAAAGGCTGCTAAAACTTCACAAAACGCCAAG
AAGAGGAGGAAATCTAAAGAATCTCATCTGACTCAGAAGATGAAGAAGAGGAGGAGGAAAATGAAGATGGCAACAGCAGCGGTGAAGAAGCATTACAAAATTTTTGGAGT
TGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASRNQTLLFRKYRDALRSVRAPTSSSLVSASPPTSSGTGGPMIELSAHTVGLPPAWVEVSEEIAANVQCDPYLDIHDGKATDKENAVVESKVSALKQTPKAAKTSQNAK
KRRKSKESHLTQKMKKRRRKMKMATAAVKKHYKIFGVD

Moc04g10060 (gene) of Bitter gourd (OHB3-1) v2 genome