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Moc04g10140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr4:7518611..7519011
RNA-Seq ExpressionMoc04g10140
SyntenyMoc04g10140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.7e-1140.91Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM
        M SKK ++K + AS D+YTGPIT + SK I ++     SA+A+ IL+Q+ +  + G+VIKENPL+ D                          E  MAEM
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM

Query:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        ERK+  L+K V+ERD+EIA+LK Q++  + AE
Subjt:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.7e-1140.91Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM
        M SKK ++K + AS D+YTGPIT + SK I ++     SA+A+ IL+Q+ +  + G+VIKENPL+ D                          E  MAEM
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM

Query:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        ERK+  L+K V+ERD+EIA+LK Q++  + AE
Subjt:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.7e-1140.91Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM
        M SKK ++K + AS D+YTGPIT + SK I ++     SA+A+ IL+Q+ +  + G+VIKENPL+ D                          E  MAEM
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM

Query:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        ERK+  L+K V+ERD+EIA+LK Q++  + AE
Subjt:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.7e-1140.91Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM
        M SKK ++K + AS D+YTGPIT + SK I ++     SA+A+ IL+Q+ +  + G+VIKENPL+ D                          E  MAEM
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM

Query:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        ERK+  L+K V+ERD+EIA+LK Q++  + AE
Subjt:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]3.7e-1140.91Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM
        M SKK ++K + AS D+YTGPIT + SK I ++     SA+A+ IL+Q+ +  + G+VIKENPL+ D                          E  MAEM
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFID-------------------------TEENMAEM

Query:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        ERK+  L+K V+ERD+EIA+LK Q++  + AE
Subjt:  ERKLTTLVKTVEERDYEIASLKNQIENIDVAE

TrEMBL top hitse value%identityAlignment
A0A5A7STX4 Ty3-gypsy retrotransposon protein6.8e-1141.79Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA
        MTS+  ++K   A  D    P TH+ S+EI+  E+  P  VAK I +Q+ KP + G+VIKENP                            +DT EN MA
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA

Query:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        E+E+K+  L+K VEERDYEIA LKN IE+ D AE
Subjt:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE

A0A5A7SZB7 Ty3-gypsy retrotransposon protein6.8e-1140.3Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA
        MTS+  ++K   A  D    P TH+ S+E +  E+ +PS VAK I +Q+ KP + G++IKENP+                           +DT EN M 
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA

Query:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        E+ +K+  L+K VEERDYEIASLKN IE+ D AE
Subjt:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE

A0A5A7TJG8 Ty3-gypsy retrotransposon protein2.4e-1142.54Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA
        MTS+  ++K   A  D    P THN S+EI+  E+  P  VAK I +Q+ KP + G+VIKENP                            +DT EN MA
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA

Query:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        E+E+K+  L+K VEERDYEIA LKN IE+ D AE
Subjt:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE

A0A5D3C4W1 Ty3-gypsy retrotransposon protein6.8e-1143.86Show/hide
Query:  PITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MAEMERKLTTLVKTVEERDYEI
        P TH+ S+EI+  E+  P  VAK I +Q+ KP + G+VIKENP                            +DT EN M E+E+K+  L+K VEERDYEI
Subjt:  PITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MAEMERKLTTLVKTVEERDYEI

Query:  ASLKNQIENIDVAE
        ASLKN IE+ D AE
Subjt:  ASLKNQIENIDVAE

A0A5D3CRB1 Ty3-gypsy retrotransposon protein8.9e-1141.79Show/hide
Query:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA
        MTS+  ++K   A  D    P TH+ S+EI+  E+  P  VAK I +Q+ KP + G+VIKENP                            +DT EN MA
Subjt:  MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLF--------------------------IDTEEN-MA

Query:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE
        E+E+K+  L+K VEERDYEIA LKN IE+ D AE
Subjt:  EMERKLTTLVKTVEERDYEIASLKNQIENIDVAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCCAAGAAAACCTCTGCCAAAGTTACTTTTGCCTCGGGCGACTCCTATACAGGACCGATCACCCATAACAGTTCAAAAGAAATCCGGCTAGAAGAAAATCAAAC
TCCTTCAGCTGTTGCTAAGAAAATACTGCAGCAGATGAAGAAACCTACTCAAGTTGGAGTCGTTATCAAAGAAAACCCTTTGTTCATCGACACAGAAGAAAATATGGCTG
AAATGGAAAGGAAACTCACTACGCTAGTGAAGACGGTAGAAGAAAGAGACTATGAAATCGCTTCCTTGAAGAATCAGATTGAAAATATAGATGTTGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGTCCAAGAAAACCTCTGCCAAAGTTACTTTTGCCTCGGGCGACTCCTATACAGGACCGATCACCCATAACAGTTCAAAAGAAATCCGGCTAGAAGAAAATCAAAC
TCCTTCAGCTGTTGCTAAGAAAATACTGCAGCAGATGAAGAAACCTACTCAAGTTGGAGTCGTTATCAAAGAAAACCCTTTGTTCATCGACACAGAAGAAAATATGGCTG
AAATGGAAAGGAAACTCACTACGCTAGTGAAGACGGTAGAAGAAAGAGACTATGAAATCGCTTCCTTGAAGAATCAGATTGAAAATATAGATGTTGCTGAGTAG
Protein sequenceShow/hide protein sequence
MTSKKTSAKVTFASGDSYTGPITHNSSKEIRLEENQTPSAVAKKILQQMKKPTQVGVVIKENPLFIDTEENMAEMERKLTTLVKTVEERDYEIASLKNQIENIDVAE