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Moc04g10190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr4:7530826..7535031
RNA-Seq ExpressionMoc04g10190
SyntenyMoc04g10190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042086.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-3057.14Show/hide
Query:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST
        S MAEG  FSL +P+LANIY GL  IHD+++S G+S ACFP+HYVH WL  YF+THYK P  +RG  M+++FGEGGA Y+    A   I+KGK +SWH  
Subjt:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST

Query:  LQSRNRDEDLKE
        LQ++N+DE LK+
Subjt:  LQSRNRDEDLKE

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]5.2e-3156.91Show/hide
Query:  MVQRESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDII
        +V R  +   AS MAEG  FSLAIP+LANIY GL  IHD ++S G+S ACFPIHYVH WLA YF+T+YK P  +RG  MV++ GEGGAKY+    AR  I
Subjt:  MVQRESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDII

Query:  HKGKCISWHSTLQSRNRDEDLKE
        H  K +SWH+ LQ++N+DE L +
Subjt:  HKGKCISWHSTLQSRNRDEDLKE

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]3.0e-3161.95Show/hide
Query:  ASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHS
        AS MAEG  FSLAIPVLANIY GL  IHD ++S G+S ACFPIHYVH WLA YF+T+YK P  +RG  MV++ GEGGAKY+    AR  IHK K +SWH+
Subjt:  ASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHS

Query:  TLQSRNRDEDLKE
         LQ++N+DE L +
Subjt:  TLQSRNRDEDLKE

TYK18029.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-3057.14Show/hide
Query:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST
        S MAEG  FSL +P+LANIY GL  IHD+++S G+S ACFP+HYVH WL  YF+THYK P  +RG  M+++FGEGGA Y+    A   I+KGK +SWH  
Subjt:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST

Query:  LQSRNRDEDLKE
        LQ++N+DE LK+
Subjt:  LQSRNRDEDLKE

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]8.0e-3256.91Show/hide
Query:  RESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKG
        R  +   AS MAEG  FSLA+PVLANIY GL  +HD+++S G S ACFP+HYVH WLA YF+THYK P  +RG  MV++ GEGGAKY+    AR  IHKG
Subjt:  RESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKG

Query:  KCISWHSTLQSRNRDEDLKEIDE
        K +SWH+ L ++N+DE L +  E
Subjt:  KCISWHSTLQSRNRDEDLKEIDE

TrEMBL top hitse value%identityAlignment
A0A5A7TJC9 Reverse transcriptase5.6e-3157.14Show/hide
Query:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST
        S MAEG  FSL +P+LANIY GL  IHD+++S G+S ACFP+HYVH WL  YF+THYK P  +RG  M+++FGEGGA Y+    A   I+KGK +SWH  
Subjt:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST

Query:  LQSRNRDEDLKE
        LQ++N+DE LK+
Subjt:  LQSRNRDEDLKE

A0A5A7U349 PMD domain-containing protein2.9e-2755.17Show/hide
Query:  RESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKG
        R  +   AS MA G ++SLA+PVLANIYHGLG I  AS   G     FP+HYVH WLAHYF THY  P  VRG  M ++ GEGG+ YF E  AR++IH G
Subjt:  RESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKG

Query:  KCISWHSTLQSRNRDE
          I WH+ LQ+RN+ E
Subjt:  KCISWHSTLQSRNRDE

A0A5A7V0Y4 Uncharacterized protein2.5e-3156.91Show/hide
Query:  MVQRESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDII
        +V R  +   AS MAEG  FSLAIP+LANIY GL  IHD ++S G+S ACFPIHYVH WLA YF+T+YK P  +RG  MV++ GEGGAKY+    AR  I
Subjt:  MVQRESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDII

Query:  HKGKCISWHSTLQSRNRDEDLKE
        H  K +SWH+ LQ++N+DE L +
Subjt:  HKGKCISWHSTLQSRNRDEDLKE

A0A5D3C9B7 Uncharacterized protein1.5e-3161.95Show/hide
Query:  ASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHS
        AS MAEG  FSLAIPVLANIY GL  IHD ++S G+S ACFPIHYVH WLA YF+T+YK P  +RG  MV++ GEGGAKY+    AR  IHK K +SWH+
Subjt:  ASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHS

Query:  TLQSRNRDEDLKE
         LQ++N+DE L +
Subjt:  TLQSRNRDEDLKE

A0A5D3D3U4 Reverse transcriptase5.6e-3157.14Show/hide
Query:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST
        S MAEG  FSL +P+LANIY GL  IHD+++S G+S ACFP+HYVH WL  YF+THYK P  +RG  M+++FGEGGA Y+    A   I+KGK +SWH  
Subjt:  SYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHST

Query:  LQSRNRDEDLKE
        LQ++N+DE LK+
Subjt:  LQSRNRDEDLKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAAAGAGAAAGCATTGTCATTCCTGCTAGTTACATGGCTGAAGGTATTGTATTTAGCCTTGCCATTCCTGTTTTGGCCAACATTTATCATGGACTCGGCCATAT
CCACGATGCGTCAACTTCATATGGGAACTCAGGTGCTTGCTTTCCCATACATTATGTTCATAGTTGGCTTGCTCATTATTTCCATACACATTACAAAACTCCCATGCCGG
TTAGAGGTCTGATGATGGTTGATTATTTTGGAGAAGGTGGAGCTAAATACTTCAAGGAGGCTGCTGCTCGTGACATAATTCACAAGGGTAAATGTATATCATGGCATTCA
ACTCTACAGTCGAGAAATAGAGATGAAGATCTGAAAGAAATTGATGAGAAAAGTAGTGTCCCATCTTTGACAAGTCCTCATGTTCAAGATCCAGTTGTCGCTGGCGTCGA
AAATTTCAAGGTGCCAACTGACAAGATTGTAACTCCTCCTGATACTTTGCTTGAAACTGTTGAGGATTCTACACCAGCTAAGAAGGCGGTACATGTTGTAATGCCGGAGG
TCTCTGACCTTTATGCACAAATCCATCATAAGATAGTTGCACTAGAGGTAGCGCAGCAGCTTCCCATGGAGCCTCCTGCAGATCTCTTTAGCTTTTCCGCCTTTAGAGTT
AGAGCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAAAGAGAAAGCATTGTCATTCCTGCTAGTTACATGGCTGAAGGTATTGTATTTAGCCTTGCCATTCCTGTTTTGGCCAACATTTATCATGGACTCGGCCATAT
CCACGATGCGTCAACTTCATATGGGAACTCAGGTGCTTGCTTTCCCATACATTATGTTCATAGTTGGCTTGCTCATTATTTCCATACACATTACAAAACTCCCATGCCGG
TTAGAGGTCTGATGATGGTTGATTATTTTGGAGAAGGTGGAGCTAAATACTTCAAGGAGGCTGCTGCTCGTGACATAATTCACAAGGGTAAATGTATATCATGGCATTCA
ACTCTACAGTCGAGAAATAGAGATGAAGATCTGAAAGAAATTGATGAGAAAAGTAGTGTCCCATCTTTGACAAGTCCTCATGTTCAAGATCCAGTTGTCGCTGGCGTCGA
AAATTTCAAGGTGCCAACTGACAAGATTGTAACTCCTCCTGATACTTTGCTTGAAACTGTTGAGGATTCTACACCAGCTAAGAAGGCGGTACATGTTGTAATGCCGGAGG
TCTCTGACCTTTATGCACAAATCCATCATAAGATAGTTGCACTAGAGGTAGCGCAGCAGCTTCCCATGGAGCCTCCTGCAGATCTCTTTAGCTTTTCCGCCTTTAGAGTT
AGAGCTAGTTGA
Protein sequenceShow/hide protein sequence
MVQRESIVIPASYMAEGIVFSLAIPVLANIYHGLGHIHDASTSYGNSGACFPIHYVHSWLAHYFHTHYKTPMPVRGLMMVDYFGEGGAKYFKEAAARDIIHKGKCISWHS
TLQSRNRDEDLKEIDEKSSVPSLTSPHVQDPVVAGVENFKVPTDKIVTPPDTLLETVEDSTPAKKAVHVVMPEVSDLYAQIHHKIVALEVAQQLPMEPPADLFSFSAFRV
RAS