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Moc04g10340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:7665564..7666774
RNA-Seq ExpressionMoc04g10340
SyntenyMoc04g10340
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]2.6e-2568.67Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
        R+++YE   NE+ELLLNLDLL+E+R +AQLRL EYQ R+ RHYN+ VRPR+FQVGHLVLR+VQ HV  L+P+WEG FE+KGIV
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]1.2e-2254.46Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+++  TN +  LLNLDLLEE+R+ +QL+LAEYQ RMAR+YN   R R F+ G L L++V  HV AL+P WEGP+ +  +VRP  Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]2.6e-3369.31Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+YE   NE+ELLL LDL++E+R  AQLRLAEYQ +MARHYN+ VR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVRPGTY+LADL+G +L+H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]3.8e-2456.44Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+++   N + LL+NLDLLEE+R+ +QLRLAEYQ RMAR+YNA V+ R F+   LVL++V  HVGAL+P WEGP+ +  I+RP  Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]2.9e-3256.72Show/hide
Query:  TPESSWMDPIADFIRGNSPQDPKERRKLARRAARVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVG
        TP  S  +       G+    P E   +     R+E YEP  NE ELLLNLDLLE +R  AQLRL E Q RMARHYN  ++PR+FQVGHLV  ++Q+HVG
Subjt:  TPESSWMDPIADFIRGNSPQDPKERRKLARRAARVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVG

Query:  ALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
         LDP+WE  FE+KGIVRPGTY+LADL+  VLAHP
Subjt:  ALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

TrEMBL top hitse value%identityAlignment
A0A6J1CLW5 protein NYNRIN-like1.3e-2568.67Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
        R+++YE   NE+ELLLNLDLL+E+R +AQLRL EYQ R+ RHYN+ VRPR+FQVGHLVLR+VQ HV  L+P+WEG FE+KGIV
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV

A0A6J1DP99 uncharacterized protein K02A2.6-like1.3e-3369.31Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+YE   NE+ELLL LDL++E+R  AQLRLAEYQ +MARHYN+ VR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVRPGTY+LADL+G +L+H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

A0A6J1DS38 uncharacterized protein LOC1110230175.9e-2354.46Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+++  TN +  LLNLDLLEE+R+ +QL+LAEYQ RMAR+YN   R R F+ G L L++V  HV AL+P WEGP+ +  +VRP  Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

A0A6J1DWM2 Ribonuclease H1.8e-2456.44Show/hide
Query:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH
        RVE+++   N + LL+NLDLLEE+R+ +QLRLAEYQ RMAR+YNA V+ R F+   LVL++V  HVGAL+P WEGP+ +  I+RP  Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAH

Query:  P
        P
Subjt:  P

A0A6J1DXL9 uncharacterized protein LOC1110254481.4e-3256.72Show/hide
Query:  TPESSWMDPIADFIRGNSPQDPKERRKLARRAARVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVG
        TP  S  +       G+    P E   +     R+E YEP  NE ELLLNLDLLE +R  AQLRL E Q RMARHYN  ++PR+FQVGHLV  ++Q+HVG
Subjt:  TPESSWMDPIADFIRGNSPQDPKERRKLARRAARVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVG

Query:  ALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
         LDP+WE  FE+KGIVRPGTY+LADL+  VLAHP
Subjt:  ALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCACTCCAGAATCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGAGTAGAGCATTACGAGCCTACGACAAATGAGGATGAGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGG
GCCGAATGGCCAGACATTACAATGCCTGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGG
GAGGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGATGTCCTCGCGCACCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCACTCCAGAATCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGAGTAGAGCATTACGAGCCTACGACAAATGAGGATGAGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGG
GCCGAATGGCCAGACATTACAATGCCTGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGG
GAGGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGATGTCCTCGCGCACCCGTAG
Protein sequenceShow/hide protein sequence
MEIGTPESSWMDPIADFIRGNSPQDPKERRKLARRAARVEHYEPTTNEDELLLNLDLLEERRAMAQLRLAEYQGRMARHYNACVRPRAFQVGHLVLRRVQTHVGALDPAW
EGPFEIKGIVRPGTYILADLKGDVLAHP