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Moc04g10400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:7694741..7694965
RNA-Seq ExpressionMoc04g10400
SyntenyMoc04g10400
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00937.1 hypothetical protein Acr_14g0005720 [Actinidia rufa]5.3e-1756.41Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRV-----QTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY
        +A++YN RVR R+F  G LVLR+V     + + G L PTWEGP++V  + RPGTY L DL+G  L+HPWNAEHLK+YY
Subjt:  MARHYNARVRPRTFQVGHLVLRRV-----QTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]2.0e-1978.18Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEVKGI+R GTY+LADL+G+VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]8.0e-2174.6Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHP
        MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFEVKGIVRPGTY+LADL+G +L+HP
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]4.4e-1961.64Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY
        MAR+YNARV+ RTF+   LVL++V  HVGAL+P WEGP+ V  I+RP  Y+L+DL G  L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.7e-2877.03Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP
        MARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FEVKGIVRPGTY+LADL+  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9FYD5 Ribonuclease H2.3e-1856.96Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRV-----QTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP
        MARHYN+RV+PR   +G LVLR+V         G L P WEGP++V  + RPGTY L D+ G  L+HPWNAEHL+RYYP
Subjt:  MARHYNARVRPRTFQVGHLVLRRV-----QTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H9.5e-2078.18Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEVKGI+R GTY+LADL+G+VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like3.9e-2174.6Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHP
        MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFEVKGIVRPGTY+LADL+G +L+HP
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHP

A0A6J1DWM2 Ribonuclease H2.1e-1961.64Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY
        MAR+YNARV+ RTF+   LVL++V  HVGAL+P WEGP+ V  I+RP  Y+L+DL G  L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254483.3e-2877.03Show/hide
Query:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP
        MARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FEVKGIVRPGTY+LADL+  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGACATTACAACGCCCGCGTTCGACCTCGGACCTTTCAGGTAGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGG
GAGGGCCCGTTTGAGGTCAAGGGCATAGTCCGACCTGGGACGTACGTATTGGCCGATTTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCAGAGCACCTGAAG
CGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGACATTACAACGCCCGCGTTCGACCTCGGACCTTTCAGGTAGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGG
GAGGGCCCGTTTGAGGTCAAGGGCATAGTCCGACCTGGGACGTACGTATTGGCCGATTTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCAGAGCACCTGAAG
CGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MARHYNARVRPRTFQVGHLVLRRVQTHVGALDPTWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP