CuGenDBv2

Gene ID	Moc04g10560
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	chr4:7856338..7856844
RNA-Seq Expression	Moc04g10560
Synteny	Moc04g10560
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR012337 - Ribonuclease H-like superfamily IPR025525 - hAT-like transposase, RNase-H fold

Homology

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GenBank top hits

e value

%identity

Alignment

ACX85638.1 putative transposase [Cucumis melo]

5.0e-55

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+ QKTFERL++HDP+Y+ + D PT EDWDNA+VFV FLK FS+VT+KFSASMSVT NIFFHE+CL+Q+ IREYS YEN LLS+MT SMQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV+VV  PRYKL YV+YCF+EFLEE+ A +WTNKVE
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

ADN33674.1 transposase [Cucumis melo subsp. melo]

5.0e-55

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+ QKTFERL++HDP+Y+ + D PT EDWDNA+VFV FLK FS+VT+KFSASMSVT NIFFHE+CL+Q+ IREYS YEN LLS+MT SMQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV+VV  PRYKL YV+YCF+EFLEE+ A +WTNKVE
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

XP_016899471.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo]

1.9e-49

67.33

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        +LD AI+ QKTFERLK+HDP+Y+   D PT EDWD+A+VFV FLK FS VT+KFSASM VT NIFF+E+CL+Q+ IREYS YEN LLS+MT +MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV VV   RYKL YV+YCF+EFLE++   LWTNK+E
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

XP_016899473.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo]

1.9e-49

67.33

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        +LD AI+ QKTFERLK+HDP+Y+   D PT EDWD+A+VFV FLK FS VT+KFSASM VT NIFF+E+CL+Q+ IREYS YEN LLS+MT +MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV VV   RYKL YV+YCF+EFLE++   LWTNK+E
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

XP_022155174.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]

1.8e-65

84.11

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+F++TFERL+DHD NYI EGD PTNEDWDNARVFVGFLKIFSDVTLKFSASMSVT NIFFHE+CLVQ+TIREYSLY+N LLSKM   MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVEA
        YW VTTSE +NLLLYVAVVF PRYKLNYVSYCFHEFLEEE+A LWTNKVEA
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVEA

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DU07 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1

9.0e-50

67.33

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        +LD AI+ QKTFERLK+HDP+Y+   D PT EDWD+A+VFV FLK FS VT+KFSASM VT NIFF+E+CL+Q+ IREYS YEN LLS+MT +MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV VV   RYKL YV+YCF+EFLE++   LWTNK+E
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

A0A1S4DU44 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2

9.0e-50

67.33

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        +LD AI+ QKTFERLK+HDP+Y+   D PT EDWD+A+VFV FLK FS VT+KFSASM VT NIFF+E+CL+Q+ IREYS YEN LLS+MT +MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV VV   RYKL YV+YCF+EFLE++   LWTNK+E
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

A0A6J1DPH4 zinc finger BED domain-containing protein RICESLEEPER 2-like

8.9e-66

84.11

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+F++TFERL+DHD NYI EGD PTNEDWDNARVFVGFLKIFSDVTLKFSASMSVT NIFFHE+CLVQ+TIREYSLY+N LLSKM   MQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVEA
        YW VTTSE +NLLLYVAVVF PRYKLNYVSYCFHEFLEEE+A LWTNKVEA
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVEA

D0UIX2 Putative transposase

2.4e-55

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+ QKTFERL++HDP+Y+ + D PT EDWDNA+VFV FLK FS+VT+KFSASMSVT NIFFHE+CL+Q+ IREYS YEN LLS+MT SMQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV+VV  PRYKL YV+YCF+EFLEE+ A +WTNKVE
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

E5GB32 Transposase

2.4e-55

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        MLD AI+ QKTFERL++HDP+Y+ + D PT EDWDNA+VFV FLK FS+VT+KFSASMSVT NIFFHE+CL+Q+ IREYS YEN LLS+MT SMQ +FNK
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE
        YW +TTSE  NLLLYV+VV  PRYKL YV+YCF+EFLEE+ A +WTNKVE
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVE

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

1.2e-11

29.58

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        ML  A+ +++ F  L+  D NY    + P+ EDW        +LK+  D      A+ + T N+FFHE   +Q  +   +  E+ + S +   M   F+K
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA
        YW     ++ NL+L +AVV  PR+K+  V + + +    E A
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

4.2e-12

29.58

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        ML  A+ +++ F  L+  D NY    + P+ EDW        +LK+  D      A+ + T N+FFHE   +Q  +   + +E+ + S +   M   F+K
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA
        YW     ++ NL+L +AVV  PR+K+  V + + +    E A
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

1.4e-10

28.87

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        ML  A+ +Q+ F  L+  D +Y    + P+ EDW        +L +  D      A+ + T NIFFHE   +Q  +     +E+ +       M   F+K
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA
        YW     ++ NL+L +AVV  PR+K+  V + + +    E A
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEENA

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER

6.9e-07

26.43

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        ML  A + ++ F  L   DP+Y      P+ EDW +      FLK   +      ++ + +   FFHE+   Q  +      E+  ++ +  +MQ + +K
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEE
        YW      + +L+L +AVV  PR+K+  V + F +   E+
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEE

Arabidopsis top hits

e value

%identity

Alignment

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

4.9e-08

26.43

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Query:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK
        ML  A + ++ F  L   DP+Y      P+ EDW +      FLK   +      ++ + +   FFHE+   Q  +      E+  ++ +  +MQ + +K
Subjt:  MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNK

Query:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEE
        YW      + +L+L +AVV  PR+K+  V + F +   E+
Subjt:  YWSVTTSENMNLLLYVAVVFAPRYKLNYVSYCFHEFLEEE

Sequences

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CDS sequence

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ATGTTAGATGAAGCAATTCAATTCCAAAAGACTTTTGAAAGATTAAAGGATCATGACCCAAATTATATTACAGAAGGTGACGGACCTACTAATGAAGATTGGGATAATGC
TAGAGTATTTGTAGGGTTCTTGAAAATATTTTCAGATGTTACCCTAAAGTTTTCTGCATCAATGTCTGTGACTTTGAACATATTTTTTCATGAAATGTGTTTGGTTCAGA
AAACAATTCGTGAATACTCTTTGTATGAAAATGTCTTGTTGAGTAAAATGACATCAAGCATGCAAGCAGAATTTAACAAGTATTGGAGTGTAACTACAAGTGAGAATATG
AACTTATTGTTATATGTTGCAGTTGTTTTTGCCCCTAGATATAAGTTAAATTATGTGAGTTATTGCTTTCATGAATTTTTGGAGGAAGAAAATGCAATTTTGTGGACAAA
TAAGGTTGAAGCTAAGCAGCATTACGTCGATTGTGGGATGACTATTATACACGAATGTCAATGCTAA

mRNA sequence

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Protein sequence

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MLDEAIQFQKTFERLKDHDPNYITEGDGPTNEDWDNARVFVGFLKIFSDVTLKFSASMSVTLNIFFHEMCLVQKTIREYSLYENVLLSKMTSSMQAEFNKYWSVTTSENM
NLLLYVAVVFAPRYKLNYVSYCFHEFLEEENAILWTNKVEAKQHYVDCGMTIIHECQC

Moc04g10560 (gene) of Bitter gourd (OHB3-1) v2 genome