; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g10620 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10620
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:7913163..7914057
RNA-Seq ExpressionMoc04g10620
SyntenyMoc04g10620
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]3.5e-4575.4Show/hide
Query:  SLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDG
        S   +NSN +A+S YN +TPE VITREEFD +K++FDAQV A K KCEKKESSFDDG++GESPFTSDILEA I  KFKT  MKPYDGSKDP DYVEVF+G
Subjt:  SLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDG

Query:  LMDFQAAFDAIKCREFQIAMTGSTRL
        LMDFQAA DAIKCR+FQIA+TGS RL
Subjt:  LMDFQAAFDAIKCREFQIAMTGSTRL

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]5.7e-4372.95Show/hide
Query:  KNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDF
        +NSN +A+S YN +TP+ VITREEFD +K++FDAQV A K  CEKKESSFDDG++GE PFT DILEAPI PKFKT  MKPYDGSK+P DYV+VF+GLM+F
Subjt:  KNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDF

Query:  QAAFDAIKCREFQIAMTGSTRL
        QAA DAIKCR FQIA TGS RL
Subjt:  QAAFDAIKCREFQIAMTGSTRL

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]8.7e-4476.86Show/hide
Query:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ
        NSN KAQS+Y  L PE VI REEFDLMK RFD QV A K +CEKKES FDD ++GESPFTSDI+EAPI PKFKT  MKPYDGSKDP DYVEVF+GLMDFQ
Subjt:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ

Query:  AAFDAIKCREFQIAMTGSTRL
        AA DAIKC  FQIA+TGS RL
Subjt:  AAFDAIKCREFQIAMTGSTRL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]3.9e-4472.44Show/hide
Query:  SSLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFD
        S+   KNSN +A+S YN + PE VITREEF+ +K++FDAQV A K++CEKKES+FDDG++GESPFTSDILEA I PKFKT  MK YDGSKDP DYVEVF+
Subjt:  SSLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFD

Query:  GLMDFQAAFDAIKCREFQIAMTGSTRL
        GLMDFQAA DAIKCR FQIA+TGS RL
Subjt:  GLMDFQAAFDAIKCREFQIAMTGSTRL

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.9e-4377.69Show/hide
Query:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ
        NS+ KAQS+Y  LTPE VITREEFDLMK RFD QV A K KCEKKE SFDDG++GESPFTSDILE PI PKFKT  MK YD SKDP DYVEVF+GLMDFQ
Subjt:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ

Query:  AAFDAIKCREFQIAMTGSTRL
        AA DAIKC  FQIA+TGS RL
Subjt:  AAFDAIKCREFQIAMTGSTRL

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196341.7e-4575.4Show/hide
Query:  SLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDG
        S   +NSN +A+S YN +TPE VITREEFD +K++FDAQV A K KCEKKESSFDDG++GESPFTSDILEA I  KFKT  MKPYDGSKDP DYVEVF+G
Subjt:  SLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDG

Query:  LMDFQAAFDAIKCREFQIAMTGSTRL
        LMDFQAA DAIKCR+FQIA+TGS RL
Subjt:  LMDFQAAFDAIKCREFQIAMTGSTRL

A0A6J1DM55 uncharacterized protein LOC1110222672.7e-4372.95Show/hide
Query:  KNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDF
        +NSN +A+S YN +TP+ VITREEFD +K++FDAQV A K  CEKKESSFDDG++GE PFT DILEAPI PKFKT  MKPYDGSK+P DYV+VF+GLM+F
Subjt:  KNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDF

Query:  QAAFDAIKCREFQIAMTGSTRL
        QAA DAIKCR FQIA TGS RL
Subjt:  QAAFDAIKCREFQIAMTGSTRL

A0A6J1DPC9 uncharacterized protein LOC1110222804.2e-4476.86Show/hide
Query:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ
        NSN KAQS+Y  L PE VI REEFDLMK RFD QV A K +CEKKES FDD ++GESPFTSDI+EAPI PKFKT  MKPYDGSKDP DYVEVF+GLMDFQ
Subjt:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ

Query:  AAFDAIKCREFQIAMTGSTRL
        AA DAIKC  FQIA+TGS RL
Subjt:  AAFDAIKCREFQIAMTGSTRL

A0A6J1DPN4 uncharacterized protein LOC1110230601.9e-4472.44Show/hide
Query:  SSLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFD
        S+   KNSN +A+S YN + PE VITREEF+ +K++FDAQV A K++CEKKES+FDDG++GESPFTSDILEA I PKFKT  MK YDGSKDP DYVEVF+
Subjt:  SSLLQKNSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFD

Query:  GLMDFQAAFDAIKCREFQIAMTGSTRL
        GLMDFQAA DAIKCR FQIA+TGS RL
Subjt:  GLMDFQAAFDAIKCREFQIAMTGSTRL

A0A6J1DVR0 uncharacterized protein LOC1110245039.4e-4477.69Show/hide
Query:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ
        NS+ KAQS+Y  LTPE VITREEFDLMK RFD QV A K KCEKKE SFDDG++GESPFTSDILE PI PKFKT  MK YD SKDP DYVEVF+GLMDFQ
Subjt:  NSNSKAQSRYNLLTPEEVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQ

Query:  AAFDAIKCREFQIAMTGSTRL
        AA DAIKC  FQIA+TGS RL
Subjt:  AAFDAIKCREFQIAMTGSTRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATAATGGCCTCCAGCGTGAGGTCGATGCCAAGGTCGCGGAAGACTAGGTCCAATAAGTACAGGCAATCGATCAGCCCCAGAGGCTGGCCTACAATGCGAATCCA
ACCTTGCCTCCTACTCATTCCAGACCCGCCAAGACCCACTGAGGTCGAGGTGGGGTGTCCAAAAAAACCTCACGGAGGTCCGTACCGGCTCCGGATCTTGATGTTCTCGC
TACCCTTCAGCGGGAGCTGGATGATATGCGCAATCGAATGTTTCTCCTCCCTACTCCAAAAGAACTCGAATTCCAAAGCCCAATCTCGTTACAATCTGTTAACACCCGAA
GAGGTGATTACAAGGGAAGAGTTCGACCTGATGAAAACTAGATTCGACGCACAGGTTTCGGCTCAAAAGTTGAAGTGCGAGAAGAAAGAGAGCTCGTTCGATGATGGTGA
GATGGGCGAATCGCCATTCACCTCGGACATCCTTGAAGCACCTATCTCCCCCAAATTCAAGACGTCTGCCATGAAGCCTTATGATGGGTCTAAGGACCCGAACGACTATG
TTGAGGTCTTCGACGGCCTCATGGACTTTCAGGCAGCATTCGACGCCATTAAATGCAGAGAATTCCAGATTGCTATGACTGGGAGCACTCGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATAATGGCCTCCAGCGTGAGGTCGATGCCAAGGTCGCGGAAGACTAGGTCCAATAAGTACAGGCAATCGATCAGCCCCAGAGGCTGGCCTACAATGCGAATCCA
ACCTTGCCTCCTACTCATTCCAGACCCGCCAAGACCCACTGAGGTCGAGGTGGGGTGTCCAAAAAAACCTCACGGAGGTCCGTACCGGCTCCGGATCTTGATGTTCTCGC
TACCCTTCAGCGGGAGCTGGATGATATGCGCAATCGAATGTTTCTCCTCCCTACTCCAAAAGAACTCGAATTCCAAAGCCCAATCTCGTTACAATCTGTTAACACCCGAA
GAGGTGATTACAAGGGAAGAGTTCGACCTGATGAAAACTAGATTCGACGCACAGGTTTCGGCTCAAAAGTTGAAGTGCGAGAAGAAAGAGAGCTCGTTCGATGATGGTGA
GATGGGCGAATCGCCATTCACCTCGGACATCCTTGAAGCACCTATCTCCCCCAAATTCAAGACGTCTGCCATGAAGCCTTATGATGGGTCTAAGGACCCGAACGACTATG
TTGAGGTCTTCGACGGCCTCATGGACTTTCAGGCAGCATTCGACGCCATTAAATGCAGAGAATTCCAGATTGCTATGACTGGGAGCACTCGACTCTGA
Protein sequenceShow/hide protein sequence
MVIMASSVRSMPRSRKTRSNKYRQSISPRGWPTMRIQPCLLLIPDPPRPTEVEVGCPKKPHGGPYRLRILMFSLPFSGSWMICAIECFSSLLQKNSNSKAQSRYNLLTPE
EVITREEFDLMKTRFDAQVSAQKLKCEKKESSFDDGEMGESPFTSDILEAPISPKFKTSAMKPYDGSKDPNDYVEVFDGLMDFQAAFDAIKCREFQIAMTGSTRL