; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g10780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1
Genome locationchr4:8087667..8096214
RNA-Seq ExpressionMoc04g10780
SyntenyMoc04g10780
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154414.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]9.4e-169100Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

XP_022154415.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia]2.1e-16096.7Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK          RSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

XP_022154416.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 [Momordica charantia]9.4e-169100Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

XP_022967610.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima]1.5e-12979.73Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        ML+RRFHRA TW TPLLRD T GQ+M+LGV++LQ+GNSCYCTM+Q QM ++ AD+DM +KDVNNSK L Q SE+N GD+RKHQIGENVSRKDKINFLV T
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRVADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  K
        K
Subjt:  K

XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida]4.0e-13581.85Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRAT W TPLLRDLT GQIM+LGVSRLQVG+ CYCTM+Q QM +QLA +D+KNKD NNSKAL Q SEQN GD+RKHQIG+NV RKDKINFLV T
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        L+DLR SKEAVYGALDAWVAWEQ+FPI SLK VL VLEKEQQWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMI+IYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRVADA E+LGL EEKERVL KYK LFTDE++G I+KY ++SFEKSK +RK TK ++DN +L 
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        K Q
Subjt:  KPQ

TrEMBL top hitse value%identityAlignment
A0A6J1DJJ2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X21.0e-16096.7Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK          RSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

A0A6J1DM10 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X14.6e-169100Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

A0A6J1DNN5 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X34.6e-169100Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  KPQ
        KPQ
Subjt:  KPQ

A0A6J1HGC4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.3e-12879.07Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        ML+RRFHRA TW TPLLRD T GQIM+LGV++LQ+GNSCYCTM+Q QM ++  D+DM +KDVNNSK L Q SE+N GD+RKHQIGENVSRKDKI+FLV T
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKML++LVKLFK+LEAFGRKPPEKSIVQRVADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  K
        K
Subjt:  K

A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X17.1e-13079.73Show/hide
Query:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT
        ML+RRFHRA TW TPLLRD T GQ+M+LGV++LQ+GNSCYCTM+Q QM ++ AD+DM +KDVNNSK L Q SE+N GD+RKHQIGENVSRKDKINFLV T
Subjt:  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVAT

Query:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQL
Subjt:  LVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQL

Query:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
        CRSMISIYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRVADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Subjt:  CRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.0e-3240.98Show/hide
Query:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV
        LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+E+   W M +     S+
Subjt:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV

Query:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY
        P +L   MI++Y  + + D ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +++Y
Subjt:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY

Q8LG95 Pentatricopeptide repeat-containing protein At4g211902.3e-2935.03Show/hide
Query:  NSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMR
        N+  +C          R  +  + +    K   ++A +  L   KE VYGALD+++AWE  FP+  +K+ L +LE E++W +++QV KWMLSKGQG TM 
Subjt:  NSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMR

Query:  VYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKY
         Y  L+ AL  D+R +E+ + W       L   P +    MISIYY+  M   L ++F D+E  G K P  +IV  V   +  L + ++ E++++KY
Subjt:  VYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKY

Arabidopsis top hitse value%identityAlignment
AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1)2.9e-7563.72Show/hide
Query:  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVL
        VQ+   Q +AD      R +KN+D  +     ++   N  + RKHQIGEN+ +KDKI FLV TL+D+  +KEAVYGALDAWVAWE+NFPIASLK V+A L
Subjt:  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVL

Query:  EKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIV
        EKE QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEE+H  W  K+G DLHSVPWQLC  M+ IY+RN ML  LVKLFKDLE++ RKPP+K IV
Subjt:  EKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIV

Query:  QRVADAYEMLGLHEEKERVLEKYKDL
        Q VADAYE+LG+ +EKERV+ KY  L
Subjt:  QRVADAYEMLGLHEEKERVLEKYKDL

AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4)1.2e-7362.88Show/hide
Query:  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVL
        VQ+   Q +AD      R +KN+D  +     ++   N  + RKHQIGEN+ +KDKI FLV TL+D+  +KEAVYGALDAWVAWE+NFPIASLK V+A L
Subjt:  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVL

Query:  EKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLV---KLFKDLEAFGRKPPEK
        EKE QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEE+H  W  K+G DLHSVPWQLC  M+ IY+RN ML  LV   KLFKDLE++ RKPP+K
Subjt:  EKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLV---KLFKDLEAFGRKPPEK

Query:  SIVQRVADAYEMLGLHEEKERVLEKYKDL
         IVQ VADAYE+LG+ +EKERV+ KY  L
Subjt:  SIVQRVADAYEMLGLHEEKERVLEKYKDL

AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein7.2e-3440.98Show/hide
Query:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV
        LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+E+   W M +     S+
Subjt:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV

Query:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY
        P +L   MI++Y  + + D ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +++Y
Subjt:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein7.2e-3440.98Show/hide
Query:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV
        LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+E+   W M +     S+
Subjt:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV

Query:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY
        P +L   MI++Y  + + D ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +++Y
Subjt:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein7.2e-3440.98Show/hide
Query:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV
        LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+E+   W M +     S+
Subjt:  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSV

Query:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY
        P +L   MI++Y  + + D ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +++Y
Subjt:  PWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPIQKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGTCCGGAGGTTTCATCGGGCTACGACATGGGTAACGCCTCTGTTGCGAGACCTAACTGCTGGACAAATAATGGACCTTGGAGTCAGCAGACTGCAAGTTGGGAA
CTCTTGTTACTGTACAATGGTTCAAGCTCAAATGTGTCAACAGCTTGCTGATAGAGATATGAAAAATAAGGATGTTAACAATAGTAAAGCTTTGTGCCAGAGATCAGAGC
AAAATGATGGAGACATGAGAAAGCACCAAATTGGGGAAAATGTCTCACGGAAGGACAAAATTAACTTCCTTGTAGCCACACTTGTTGATCTGAGAGGTAGTAAGGAGGCT
GTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAAACTTTCCAATAGCATCCCTTAAGCAGGTATTAGCTGTTCTTGAGAAGGAACAACAGTGGCATAGAGTTGT
TCAGGTAATCAAATGGATGTTAAGCAAGGGGCAGGGAACCACTATGAGAGTCTACGGACAGTTAATACGGGCTTTAGACATGGACCATCGAGCAGAAGAATCGCACAAAT
TCTGGGTCATGAAAATTGGTGCAGATCTACATTCGGTCCCTTGGCAATTATGCAGAAGCATGATATCAATATACTATCGAAATAAAATGCTAGACAATCTTGTGAAGCTT
TTTAAGGATCTTGAAGCTTTTGGACGCAAACCTCCAGAAAAATCCATAGTGCAGAGGGTAGCAGATGCGTATGAGATGTTAGGCTTGCATGAAGAGAAAGAGAGGGTGTT
AGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAAATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGA
AAGACAATGGCGATCTTAGGAAGCCTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGTCCGGAGGTTTCATCGGGCTACGACATGGGTAACGCCTCTGTTGCGAGACCTAACTGCTGGACAAATAATGGACCTTGGAGTCAGCAGACTGCAAGTTGGGAA
CTCTTGTTACTGTACAATGGTTCAAGCTCAAATGTGTCAACAGCTTGCTGATAGAGATATGAAAAATAAGGATGTTAACAATAGTAAAGCTTTGTGCCAGAGATCAGAGC
AAAATGATGGAGACATGAGAAAGCACCAAATTGGGGAAAATGTCTCACGGAAGGACAAAATTAACTTCCTTGTAGCCACACTTGTTGATCTGAGAGGTAGTAAGGAGGCT
GTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAAACTTTCCAATAGCATCCCTTAAGCAGGTATTAGCTGTTCTTGAGAAGGAACAACAGTGGCATAGAGTTGT
TCAGGTAATCAAATGGATGTTAAGCAAGGGGCAGGGAACCACTATGAGAGTCTACGGACAGTTAATACGGGCTTTAGACATGGACCATCGAGCAGAAGAATCGCACAAAT
TCTGGGTCATGAAAATTGGTGCAGATCTACATTCGGTCCCTTGGCAATTATGCAGAAGCATGATATCAATATACTATCGAAATAAAATGCTAGACAATCTTGTGAAGCTT
TTTAAGGATCTTGAAGCTTTTGGACGCAAACCTCCAGAAAAATCCATAGTGCAGAGGGTAGCAGATGCGTATGAGATGTTAGGCTTGCATGAAGAGAAAGAGAGGGTGTT
AGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAAATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGA
AAGACAATGGCGATCTTAGGAAGCCTCAATGA
Protein sequenceShow/hide protein sequence
MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEA
VYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKL
FKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLRKPQ