; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g10850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g10850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:8117288..8118148
RNA-Seq ExpressionMoc04g10850
SyntenyMoc04g10850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]7.7e-8886.43Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+ VAR++MHEQRG HLGPV++    G EDEEYTHQRGDLREHLNRKRSSSLRKG+SPSCSH+NSNQ AESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNP

Query:  ITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        ITPEGVIT+EEFDQLKSKFDAQVEALKA+C+KKESSFDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYV+VFEGLMDFQAATDAIKCR F
Subjt:  ITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.4e-5248.15Show/hide
Query:  MVQPANSTNTADRRALAANDGHQI-----------HEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN GHQ            HE LGTEPL RSARITT VLPPAHPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDGHQI-----------HEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT
                                                                                                   AESSYNPIT
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT

Query:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        P GVIT+EEFDQLKSKFDAQVEALKARC+KKESSFDDGDLGE  F+SDI+EA IPPKFKTPTMKPYDGSKDPKDYV+VFE LMDFQAATDAIKC AF
Subjt:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]1.8e-6589.73Show/hide
Query:  EDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIME
        EDEEYTHQRGDLREHLNRKRSSSLRKG+SPS SH+NSNQ AESSYNPITP+ VIT+EEFDQLKSKFDAQVEALKA C+KKESSFDDGDLGE PFT DI+E
Subjt:  EDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIME

Query:  APIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        API PKFKTPTMKPYDGSK+PKDYVKVFEGLM+FQAATDAIKCRAF
Subjt:  APIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]9.8e-7576.24Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESS
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D V  +++HEQ  LH  PV+EE LG           GDLR+HLNRKR+SS R  R+ +  HKNSNQ AESS
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESS

Query:  YNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCR
        YNPI PEGVIT+EEF+QLKSKFDAQVEALK RC+KKES+FDDGDLGESPFTSDI+EA IPPKFKTPTMK YDGSKDPKDYV+VFEGLMDFQAATDAIKCR
Subjt:  YNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCR

Query:  AF
        AF
Subjt:  AF

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]9.3e-11075.42Show/hide
Query:  MVQPANSTNTADRRALAANDGH-----------QIHEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL ANDGH           QIHEGLGTEP  RSARITT  L PAHPKP KANRGRGGASRRTT G APAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDGH-----------QIHEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT
        TQM TMEEMYNEMVQA GAGSRSED  ARDE                            RGDLR+HL+RKRSSSLRKGRSPSCSHKNSNQ AESSYNP+ 
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT

Query:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        PEGVIT+EEFDQLKSKFDAQVE LKARC+ K S+FDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYV+VFEGLM FQAATDAIK RAF
Subjt:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196343.7e-8886.43Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+ VAR++MHEQRG HLGPV++    G EDEEYTHQRGDLREHLNRKRSSSLRKG+SPSCSH+NSNQ AESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNP

Query:  ITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        ITPEGVIT+EEFDQLKSKFDAQVEALKA+C+KKESSFDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYV+VFEGLMDFQAATDAIKCR F
Subjt:  ITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

A0A6J1DHB3 uncharacterized protein LOC1110204796.6e-5348.15Show/hide
Query:  MVQPANSTNTADRRALAANDGHQI-----------HEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN GHQ            HE LGTEPL RSARITT VLPPAHPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDGHQI-----------HEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT
                                                                                                   AESSYNPIT
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT

Query:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        P GVIT+EEFDQLKSKFDAQVEALKARC+KKESSFDDGDLGE  F+SDI+EA IPPKFKTPTMKPYDGSKDPKDYV+VFE LMDFQAATDAIKC AF
Subjt:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

A0A6J1DM55 uncharacterized protein LOC1110222678.9e-6689.73Show/hide
Query:  EDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIME
        EDEEYTHQRGDLREHLNRKRSSSLRKG+SPS SH+NSNQ AESSYNPITP+ VIT+EEFDQLKSKFDAQVEALKA C+KKESSFDDGDLGE PFT DI+E
Subjt:  EDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIME

Query:  APIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        API PKFKTPTMKPYDGSK+PKDYVKVFEGLM+FQAATDAIKCRAF
Subjt:  APIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

A0A6J1DPN4 uncharacterized protein LOC1110230604.7e-7576.24Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESS
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D V  +++HEQ  LH  PV+EE LG           GDLR+HLNRKR+SS R  R+ +  HKNSNQ AESS
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESS

Query:  YNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCR
        YNPI PEGVIT+EEF+QLKSKFDAQVEALK RC+KKES+FDDGDLGESPFTSDI+EA IPPKFKTPTMK YDGSKDPKDYV+VFEGLMDFQAATDAIKCR
Subjt:  YNPITPEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCR

Query:  AF
        AF
Subjt:  AF

A0A6J1DZJ1 uncharacterized protein LOC1110257384.5e-11075.42Show/hide
Query:  MVQPANSTNTADRRALAANDGH-----------QIHEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL ANDGH           QIHEGLGTEP  RSARITT  L PAHPKP KANRGRGGASRRTT G APAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDGH-----------QIHEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT
        TQM TMEEMYNEMVQA GAGSRSED  ARDE                            RGDLR+HL+RKRSSSLRKGRSPSCSHKNSNQ AESSYNP+ 
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPIT

Query:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF
        PEGVIT+EEFDQLKSKFDAQVE LKARC+ K S+FDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYV+VFEGLM FQAATDAIK RAF
Subjt:  PEGVITKEEFDQLKSKFDAQVEALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCCAGCAAACTCAACCAACACAGCAGACCGAAGAGCTCTGGCTGCCAATGATGGACACCAGATTCATGAAGGCCTTGGGACAGAGCCGCTCCGTAGG
TCGGCACGCATCACCACGCTCGTTCTGCCACCGGCACATCCAAAACCGTCCAAGGCCAATCGCGGTCGAGGTGGAGCCTCAAGGAGAACCACTCGTGGACCAGCC
CCAGCTCCTACTAGGGAGAACTTCGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACTATGGAAGAGATGTACAACGAGATGGTGCAAGCC
GCGGGTGCTGGGTCTCGATCTGAAGACTGGGTGGCGCGCGATGAGATGCACGAGCAAAGAGGTCTGCACCTCGGACCAGTCGAAGAAGAGCGCCTTGGAGGAGAT
GAGGACGAAGAGTACACTCATCAAAGAGGTGATCTCCGCGAGCATCTGAACAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACGATCTCCGTCCTGCTCGCACAAG
AACTCCAACCAACATGCCGAGTCCTCCTACAACCCAATAACTCCCGAGGGAGTAATCACAAAGGAGGAGTTTGACCAGCTAAAGAGCAAGTTTGATGCTCAGGTT
GAAGCCTTGAAAGCTAGGTGCAAGAAAAAAGAGAGCTCGTTTGATGATGGCGACTTGGGAGAATCGCCATTCACCTCGGACATCATGGAGGCTCCAATCCCTCCG
AAGTTCAAAACTCCCACCATGAAGCCTTATGACGGGTCTAAGGACCCAAAAGACTATGTTAAAGTCTTCGAAGGCCTCATGGATTTTCAGGCGGCAACGGATGCA
ATCAAGTGCCGCGCCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGCCAGCAAACTCAACCAACACAGCAGACCGAAGAGCTCTGGCTGCCAATGATGGACACCAGATTCATGAAGGCCTTGGGACAGAGCCGCTCCGTAGG
TCGGCACGCATCACCACGCTCGTTCTGCCACCGGCACATCCAAAACCGTCCAAGGCCAATCGCGGTCGAGGTGGAGCCTCAAGGAGAACCACTCGTGGACCAGCC
CCAGCTCCTACTAGGGAGAACTTCGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACTATGGAAGAGATGTACAACGAGATGGTGCAAGCC
GCGGGTGCTGGGTCTCGATCTGAAGACTGGGTGGCGCGCGATGAGATGCACGAGCAAAGAGGTCTGCACCTCGGACCAGTCGAAGAAGAGCGCCTTGGAGGAGAT
GAGGACGAAGAGTACACTCATCAAAGAGGTGATCTCCGCGAGCATCTGAACAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACGATCTCCGTCCTGCTCGCACAAG
AACTCCAACCAACATGCCGAGTCCTCCTACAACCCAATAACTCCCGAGGGAGTAATCACAAAGGAGGAGTTTGACCAGCTAAAGAGCAAGTTTGATGCTCAGGTT
GAAGCCTTGAAAGCTAGGTGCAAGAAAAAAGAGAGCTCGTTTGATGATGGCGACTTGGGAGAATCGCCATTCACCTCGGACATCATGGAGGCTCCAATCCCTCCG
AAGTTCAAAACTCCCACCATGAAGCCTTATGACGGGTCTAAGGACCCAAAAGACTATGTTAAAGTCTTCGAAGGCCTCATGGATTTTCAGGCGGCAACGGATGCA
ATCAAGTGCCGCGCCTTCTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRALAANDGHQIHEGLGTEPLRRSARITTLVLPPAHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMRTQMRTMEEMYNEMVQA
AGAGSRSEDWVARDEMHEQRGLHLGPVEEERLGGDEDEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQHAESSYNPITPEGVITKEEFDQLKSKFDAQV
EALKARCKKKESSFDDGDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVKVFEGLMDFQAATDAIKCRAF