| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036997.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa] | 1.6e-46 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| KAA0047644.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-46 | 53.09 | Show/hide |
Query: RGRRRACFKCDEKYSVGHRCKKR---ELRVFVVHND----EHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCG
R + CF+C+EKYSV HRCK + EL++FVV + E EE+T + L+EEEK K ++ NS+VGL PGTMK KGKIQEREVI+L DCG
Subjt: RGRRRACFKCDEKYSVGHRCKKR---ELRVFVVHND----EHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCG
Query: ATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTFEKDG
ATHNFIS KL + LQ+ +T YGVI+GS T ++G GIC+ V + L + E+FLPLELG +DVVLGMQWL +G VDW LT+TF +G
Subjt: ATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTFEKDG
|
|
| KAA0049174.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa] | 1.6e-46 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| TYK17386.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa] | 1.6e-46 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia] | 6.5e-53 | 56.52 | Show/hide |
Query: RRGRRRACFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFI
RR + CF+ +EKYS+GHRCK +EL+VFVVH+DE E D E +I E +E + V +A N++VG +TPGTMK +G I+++EV++L DCGATHNFI
Subjt: RRGRRRACFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFI
Query: STKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
S KL D + +T +YGVIMG+ +RG GICKG++L LPE+TI E+FLPLELG+LDVVLGMQWL G ++VDW ALTM+F
Subjt: STKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T606 Gypsy/ty3 element polyprotein | 7.5e-47 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| A0A5A7TXF0 Ty3/gypsy retrotransposon protein | 5.8e-47 | 53.09 | Show/hide |
Query: RGRRRACFKCDEKYSVGHRCKKR---ELRVFVVHND----EHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCG
R + CF+C+EKYSV HRCK + EL++FVV + E EE+T + L+EEEK K ++ NS+VGL PGTMK KGKIQEREVI+L DCG
Subjt: RGRRRACFKCDEKYSVGHRCKKR---ELRVFVVHND----EHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCG
Query: ATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTFEKDG
ATHNFIS KL + LQ+ +T YGVI+GS T ++G GIC+ V + L + E+FLPLELG +DVVLGMQWL +G VDW LT+TF +G
Subjt: ATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTFEKDG
|
|
| A0A5D3BD16 Ty3/gypsy retrotransposon protein | 7.5e-47 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| A0A5D3D378 Gypsy/ty3 element polyprotein | 7.5e-47 | 53.11 | Show/hide |
Query: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
C++C+E +S GHRCK RELR+ VV +D ED EM+ E + E VE ++ NS+VGLT PGT K KG ++ +E++++ DCGATHNFIS KL +
Subjt: CFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADE
Query: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
L++ +T +YGVIMGS ++G GICKG+ + LP ++I+EDFLPLELG++D+VLGMQWL++ G + VDW ALTMTF
Subjt: LQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| A0A6J1DN22 Reverse transcriptase | 3.2e-53 | 56.52 | Show/hide |
Query: RRGRRRACFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFI
RR + CF+ +EKYS+GHRCK +EL+VFVVH+DE E D E +I E +E + V +A N++VG +TPGTMK +G I+++EV++L DCGATHNFI
Subjt: RRGRRRACFKCDEKYSVGHRCKKRELRVFVVHNDEHAEEDTEMMIPEDELKEEEKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFI
Query: STKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
S KL D + +T +YGVIMG+ +RG GICKG++L LPE+TI E+FLPLELG+LDVVLGMQWL G ++VDW ALTM+F
Subjt: STKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELGDLDVVLGMQWLRRVGRIQVDWPALTMTF
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G53705.1 aminoacyl-tRNA ligases;nucleotide binding;ATP binding | 5.4e-05 | 38.24 | Show/hide |
Query: MGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGMQWLRRVGRIQVDWPALTMTFEKD
MG I G C G+ L + E I+ED+L L+L D DV+LG +WL ++G ++ T TF D
Subjt: MGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGMQWLRRVGRIQVDWPALTMTFEKD
|
|
| AT1G53705.2 aminoacyl-tRNA ligases;nucleotide binding;ATP binding | 5.4e-05 | 38.24 | Show/hide |
Query: MGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGMQWLRRVGRIQVDWPALTMTFEKD
MG I G C G+ L + E I+ED+L L+L D DV+LG +WL ++G ++ T TF D
Subjt: MGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGMQWLRRVGRIQVDWPALTMTFEKD
|
|
| AT3G29750.1 Eukaryotic aspartyl protease family protein | 2.8e-17 | 37.5 | Show/hide |
Query: IVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGM
++ LT M+F G I + +V+V D GAT NFI +LA L++ + T V++G R I+ G C G+ L + E+ I E+FL L+L D+DV+LG
Subjt: IVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPLELG--DLDVVLGM
Query: QWLRRVGRIQVDWPALTMTF
+WL ++G V+W +F
Subjt: QWLRRVGRIQVDWPALTMTF
|
|
| AT3G30770.1 Eukaryotic aspartyl protease family protein | 1.2e-12 | 35.71 | Show/hide |
Query: EKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPL
E K + V S T M+F G I +V+V+ D GAT+NFIS +LA L++ + T V++G R I+ G C G+ L + E+ I E+FL L
Subjt: EKGKAVEYVAFNSIVGLTTPGTMKFKGKIQEREVIVLFDCGATHNFISTKLADELQMVRTKTPSYGVIMGSRTTIRGGGICKGVVLALPEMTIMEDFLPL
Query: EL--GDLDVVLGMQWLRRVGRIQVDW
+L D+DV+LG + + R + W
Subjt: EL--GDLDVVLGMQWLRRVGRIQVDW
|
|
