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Moc04g11050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g11050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:8277852..8278473
RNA-Seq ExpressionMoc04g11050
SyntenyMoc04g11050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS31826.1 hypothetical protein Acr_00g0019390 [Actinidia rufa]6.4e-0739.74Show/hide
Query:  NKLDSQRSKRDVPSTSYLNRADL-IQGEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        N ++   ++ D P T  + R  L ++ +   L  ++G+ DP+D+LETYK+LMD  A P+ + CRAF  TL+GS R W+
Subjt:  NKLDSQRSKRDVPSTSYLNRADL-IQGEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

GFS41820.1 hypothetical protein Acr_00g0076520 [Actinidia rufa]6.4e-0727.01Show/hide
Query:  MDVMRAQVAALTKALQTAGVLLPEFPEPEVQRDLRRGKT-------KATEADQEILKG---HNLSKLVLGGNDLPRELEDMRTRLSSLNER-DLRNKLDS
        M +M  +   L + L  A   LP  P P+++R     ++       K+++      +G   H    +        +++ D+  RL ++N R +    +D+
Subjt:  MDVMRAQVAALTKALQTAGVLLPEFPEPEVQRDLRRGKT-------KATEADQEILKG---HNLSKLVLGGNDLPRELEDMRTRLSSLNER-DLRNKLDS

Query:  QRSKRDVPSTSYLNRADLIQ--GEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
           + + P T  + RA +       ++L  Y G  DP+D+L++YKSLM      N V C+AFS TL+G AR W+
Subjt:  QRSKRDVPSTSYLNRADLIQ--GEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]1.1e-0654.9Show/hide
Query:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        +A  +  Y+GS DP DY+E ++SLMDF A  +A+KCRAF + L GSAR WY
Subjt:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

XP_022149836.1 uncharacterized protein LOC111018172 [Momordica charantia]3.4e-0860.87Show/hide
Query:  HNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        + Y+G+ DPVD++ETY+ +MDF AY +A+KCRA S+TLQG ARKW+
Subjt:  HNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

XP_030923433.1 uncharacterized protein LOC115950367 [Quercus lobata]1.1e-0637.23Show/hide
Query:  EDMRTRLSSLNERDLRNKLDSQRSKRDVPSTSYLNRADLIQG-EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        E M   +++L  R + N LD   ++ + P T+ +N   L Q     ++ +YNG  DP+D+L+T+K+LM F   P+ + CRAF  TL+G AR W+
Subjt:  EDMRTRLSSLNERDLRNKLDSQRSKRDVPSTSYLNRADLIQG-EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088135.3e-0754.9Show/hide
Query:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        +A  +  Y+GS DP DY+E ++SLMDF A  +A+KCRAF + L GSAR WY
Subjt:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

A0A6J1D9E1 uncharacterized protein LOC1110188235.3e-0752.94Show/hide
Query:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        EA  + +Y+GS DP DY+E ++ LMDF A  +A+KCRAF + L GSAR W+
Subjt:  EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

A0A6J1D9M1 uncharacterized protein LOC1110181721.6e-0860.87Show/hide
Query:  HNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        + Y+G+ DPVD++ETY+ +MDF AY +A+KCRA S+TLQG ARKW+
Subjt:  HNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

A0A7J0DBQ5 Retrotrans_gag domain-containing protein3.1e-0739.74Show/hide
Query:  NKLDSQRSKRDVPSTSYLNRADL-IQGEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
        N ++   ++ D P T  + R  L ++ +   L  ++G+ DP+D+LETYK+LMD  A P+ + CRAF  TL+GS R W+
Subjt:  NKLDSQRSKRDVPSTSYLNRADL-IQGEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

A0A7J0DUB5 Retrotrans_gag domain-containing protein3.1e-0727.01Show/hide
Query:  MDVMRAQVAALTKALQTAGVLLPEFPEPEVQRDLRRGKT-------KATEADQEILKG---HNLSKLVLGGNDLPRELEDMRTRLSSLNER-DLRNKLDS
        M +M  +   L + L  A   LP  P P+++R     ++       K+++      +G   H    +        +++ D+  RL ++N R +    +D+
Subjt:  MDVMRAQVAALTKALQTAGVLLPEFPEPEVQRDLRRGKT-------KATEADQEILKG---HNLSKLVLGGNDLPRELEDMRTRLSSLNER-DLRNKLDS

Query:  QRSKRDVPSTSYLNRADLIQ--GEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY
           + + P T  + RA +       ++L  Y G  DP+D+L++YKSLM      N V C+AFS TL+G AR W+
Subjt:  QRSKRDVPSTSYLNRADLIQ--GEASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCATGAGGGCTCAAGTGGCAGCCCTAACTAAGGCGCTACAAACGGCAGGTGTACTACTCCCCGAGTTCCCTGAGCCTGAGGTTCAACGCGACCTCCGAAGGGG
AAAAACGAAGGCTACAGAGGCCGACCAGGAAATATTGAAGGGGCATAACCTGTCAAAGCTAGTCCTGGGAGGAAACGACCTCCCTCGGGAACTGGAGGACATGCGGACCC
GCCTTTCCTCGCTGAACGAGCGAGACCTTCGCAACAAGCTGGACTCCCAACGCTCCAAGAGGGACGTCCCTTCAACGAGCTATCTTAATCGCGCCGATCTCATCCAAGGG
GAAGCTTCCGAGCTTCACAACTATAACGGATCCGCCGACCCGGTGGACTACTTGGAGACCTACAAGTCATTGATGGATTTCCTCGCCTACCCTAATGCGGTGAAGTGCAG
GGCGTTCTCCGTGACTCTACAGGGGTCCGCGAGGAAATGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTCATGAGGGCTCAAGTGGCAGCCCTAACTAAGGCGCTACAAACGGCAGGTGTACTACTCCCCGAGTTCCCTGAGCCTGAGGTTCAACGCGACCTCCGAAGGGG
AAAAACGAAGGCTACAGAGGCCGACCAGGAAATATTGAAGGGGCATAACCTGTCAAAGCTAGTCCTGGGAGGAAACGACCTCCCTCGGGAACTGGAGGACATGCGGACCC
GCCTTTCCTCGCTGAACGAGCGAGACCTTCGCAACAAGCTGGACTCCCAACGCTCCAAGAGGGACGTCCCTTCAACGAGCTATCTTAATCGCGCCGATCTCATCCAAGGG
GAAGCTTCCGAGCTTCACAACTATAACGGATCCGCCGACCCGGTGGACTACTTGGAGACCTACAAGTCATTGATGGATTTCCTCGCCTACCCTAATGCGGTGAAGTGCAG
GGCGTTCTCCGTGACTCTACAGGGGTCCGCGAGGAAATGGTACTGA
Protein sequenceShow/hide protein sequence
MDVMRAQVAALTKALQTAGVLLPEFPEPEVQRDLRRGKTKATEADQEILKGHNLSKLVLGGNDLPRELEDMRTRLSSLNERDLRNKLDSQRSKRDVPSTSYLNRADLIQG
EASELHNYNGSADPVDYLETYKSLMDFLAYPNAVKCRAFSVTLQGSARKWY