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Moc04g11260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g11260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:8478001..8480967
RNA-Seq ExpressionMoc04g11260
SyntenyMoc04g11260
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00092.1 protein NYNRIN-like [Cucumis melo var. makuwa]5.4e-1555.56Show/hide
Query:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        ++ F+H+ RE+ ++ DALATLS+ F V   EEV+PI+ EK E P+YC+ +E E D KPWY DIK YI  REYP G SEN K
Subjt:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.6e-1454.65Show/hide
Query:  NQDF-TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        +Q+F  ++FD++ REN ++ DALATL+  F +EL E+V PI+  +R+VPA C+ IEEE D KPW+ DIKQYI  +EYP   SENDK
Subjt:  NQDF-TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

XP_027188669.1 uncharacterized protein LOC101504764 [Cicer arietinum]1.2e-1455Show/hide
Query:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        + F H+ RE+ ++ DALATLSS F +   +E+  I+ E R+ PAYC  +EEE DEKPWY DIK Y+  REYP GISEN+K
Subjt:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

XP_027191139.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101489332 [Cicer arietinum]5.4e-1547.52Show/hide
Query:  EEMMIDFMARNDEAVHNQDFTVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISEND
        +  +I +     E V N +  + F HI RE  ++ DALATLSS F + + ++V  I+ +++  PAYCL IEEE+D KPW++DIK Y+  REYP GISEND
Subjt:  EEMMIDFMARNDEAVHNQDFTVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISEND

Query:  K
        K
Subjt:  K

XP_027913807.1 LOW QUALITY PROTEIN: uncharacterized protein LOC114173538 [Vigna unguiculata]1.6e-1458.02Show/hide
Query:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        ++ F HI RE+ +++DALATLSS F V   E +  IQ +  E PAYC +IEEE D KPWYFDIK+Y+  REYPE  SENDK
Subjt:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

TrEMBL top hitse value%identityAlignment
A0A3Q7X4P5 Ribonuclease H5.8e-1555Show/hide
Query:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        + F H+ RE+ ++ DALATLSS F +   +E+  I+ E R+ PAYC  +EEE DEKPWY DIK Y+  REYP GISEN+K
Subjt:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

A0A3Q7XC48 Reverse transcriptase2.6e-1547.52Show/hide
Query:  EEMMIDFMARNDEAVHNQDFTVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISEND
        +  +I +     E V N +  + F HI RE  ++ DALATLSS F + + ++V  I+ +++  PAYCL IEEE+D KPW++DIK Y+  REYP GISEND
Subjt:  EEMMIDFMARNDEAVHNQDFTVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISEND

Query:  K
        K
Subjt:  K

A0A3Q7XX44 Ribonuclease H9.9e-1555Show/hide
Query:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        + F HILRE  ++ DALA LSS F +   ++V  I+ ++R+ PAYCL IEEE+D KPW++DIK Y+  +EYP GISENDK
Subjt:  VAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

A0A5D3BMZ2 Protein NYNRIN-like2.6e-1555.56Show/hide
Query:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        ++ F+H+ RE+ ++ DALATLS+ F V   EEV+PI+ EK E P+YC+ +E E D KPWY DIK YI  REYP G SEN K
Subjt:  TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

A0A6J1D099 Ribonuclease H7.6e-1554.65Show/hide
Query:  NQDF-TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK
        +Q+F  ++FD++ REN ++ DALATL+  F +EL E+V PI+  +R+VPA C+ IEEE D KPW+ DIKQYI  +EYP   SENDK
Subjt:  NQDF-TVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYI--REYPEGISENDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCCACTCCCCTAAAGTCGGGGAGGAGTGAATTCCA
TCTTGTGAAGTTATGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCGGGCTACTCTCACCCATACAGATCAAAGGACGAGCC
CTCACGGGCAGGAGTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAATAGCAACCTATTAGTTAACGGTGTTACATCTAAAGATTGCCTATTT
CGTGGTTCGCTAGGAAACCAACAAGAATTCACCCCTTATTCAAATCCATACAACCAAGATTGCCTTGAAGAGATGATGATAGATTTTATGGCAAGAAATGATGAAGCAGT
ACACAACCAAGATTTTACCGTTGCTTTTGATCATATTCTGCGAGAAAACTATAAAATCATCGATGCACTAGCAACATTATCTTCCACGTTTATTGTAGAGCTAAAGGAGG
AAGTAGAACCAATCCAGAGTGAAAAGCGAGAGGTTCCTGCATATTGTCTTTATATTGAAGAAGAAGTGGATGAAAAACCATGGTATTTTGACATTAAACAGTACATTAGG
GAATATCCTGAAGGAATCTCAGAAAATGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCCACTCCCCTAAAGTCGGGGAGGAGTGAATTCCA
TCTTGTGAAGTTATGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCGGGCTACTCTCACCCATACAGATCAAAGGACGAGCC
CTCACGGGCAGGAGTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAATAGCAACCTATTAGTTAACGGTGTTACATCTAAAGATTGCCTATTT
CGTGGTTCGCTAGGAAACCAACAAGAATTCACCCCTTATTCAAATCCATACAACCAAGATTGCCTTGAAGAGATGATGATAGATTTTATGGCAAGAAATGATGAAGCAGT
ACACAACCAAGATTTTACCGTTGCTTTTGATCATATTCTGCGAGAAAACTATAAAATCATCGATGCACTAGCAACATTATCTTCCACGTTTATTGTAGAGCTAAAGGAGG
AAGTAGAACCAATCCAGAGTGAAAAGCGAGAGGTTCCTGCATATTGTCTTTATATTGAAGAAGAAGTGGATGAAAAACCATGGTATTTTGACATTAAACAGTACATTAGG
GAATATCCTGAAGGAATCTCAGAAAATGATAAGTGA
Protein sequenceShow/hide protein sequence
MRGWGPLFKSRPLFKSRSQHLREHSSTPLKSGRSEFHLVKLCSQLPTRSRPQNGRNVESATRATLTHTDQRTSPHGQESITHSGLRMSCLVILRNSNLLVNGVTSKDCLF
RGSLGNQQEFTPYSNPYNQDCLEEMMIDFMARNDEAVHNQDFTVAFDHILRENYKIIDALATLSSTFIVELKEEVEPIQSEKREVPAYCLYIEEEVDEKPWYFDIKQYIR
EYPEGISENDK