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Moc04g12080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr4:9114876..9119843
RNA-Seq ExpressionMoc04g12080
SyntenyMoc04g12080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042126.1 hypothetical protein E6C27_scaffold67G006100 [Cucumis melo var. makuwa]6.6e-2042Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS E G+ YF ++E R+LIH G  I W  N+ +R+K E + D    S  Q SY+   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG
         R  E  A    E   E  + S      +HWK   RP K    +  + DG
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]4.6e-2145Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS EGG+ YF ++E R+LIH    I W  N+ +R+K E + D    S  Q SYF   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV
         R  E  A+   E   E  ++S  S   +HWKR  +  KV
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]4.6e-2145Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS EGG+ YF ++E R+LIH    I W  N+ +R+K E + D    S  Q SYF   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV
         R  E  A+   E   E  ++S  S   +HWKR  +  KV
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV

TYK18070.1 hypothetical protein E5676_scaffold306G004010 [Cucumis melo var. makuwa]6.6e-2042Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS E G+ YF ++E R+LIH G  I W  N+ +R+K E + D    S  Q SY+   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG
         R  E  A    E   E  + S      +HWK   RP K    +  + DG
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.4e-2251.92Show/hide
Query:  EVIPSYKELTESGSCLTMHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYF
        +V  S   L  S +C  +HYVH WLA YFNTHYK P  L GP+MVEFS EGGAKY+ + E R  IH G  ++W   + ++NKDELL D+G L S   S+F
Subjt:  EVIPSYKELTESGSCLTMHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYF

Query:  SSLR
         S+R
Subjt:  SSLR

TrEMBL top hitse value%identityAlignment
A0A5A7TJH3 PMD domain-containing protein3.2e-2042Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS E G+ YF ++E R+LIH G  I W  N+ +R+K E + D    S  Q SY+   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG
         R  E  A    E   E  + S      +HWK   RP K    +  + DG
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG

A0A5A7TZZ9 PMD domain-containing protein2.2e-2145Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS EGG+ YF ++E R+LIH    I W  N+ +R+K E + D    S  Q SYF   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV
         R  E  A+   E   E  ++S  S   +HWKR  +  KV
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV

A0A5D3C543 PMD domain-containing protein2.2e-2145Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS EGG+ YF ++E R+LIH    I W  N+ +R+K E + D    S  Q SYF   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV
         R  E  A+   E   E  ++S  S   +HWKR  +  KV
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKV

A0A5D3C9B7 Uncharacterized protein5.5e-2051.04Show/hide
Query:  LTESGSCLTMHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLR
        L  S +C  +HYVH WLA YFNT+YK P  L GP+MVEFS EGGAKY+ + E R  IH    ++W   + ++NKDELL D+G+L     S+F S+R
Subjt:  LTESGSCLTMHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLR

A0A5D3D2X6 PMD domain-containing protein3.2e-2042Show/hide
Query:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN
        MHYVH WLA YF THY  P E+ GPKM  FS E G+ YF ++E R+LIH G  I W  N+ +R+K E + D    S  Q SY+   RL  N+  N GGK 
Subjt:  MHYVHSWLARYFNTHYKTPMELPGPKMVEFSSEGGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKN

Query:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG
         R  E  A    E   E  + S      +HWK   RP K    +  + DG
Subjt:  FRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNSNDQYFDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCTGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGTCGATGTCCGCCCAAGTATTCAGATCGATACTCTCAGGATTGGTT
GAGTATCTTTAGAAGACTTTACCCTTTCGGTTACCATCCTTTCGGGGATGACGCTTGCAAATTCTACGAGGAGGTTATTCCTAGCTATAAGGAATTGACAGAGTCAGGAT
CTTGTCTCACCATGCATTACGTTCATAGTTGGTTGGCTCGTTATTTCAACACTCATTATAAAACACCCATGGAGCTTCCGGGTCCTAAAATGGTTGAGTTTTCTAGTGAA
GGCGGTGCTAAATATTTCTATGATTTTGAGACTCGAAAATTGATTCATGGAGGTACGTCCATAGCATGGTTTATGAATGTTCACTCTAGGAATAAAGATGAACTTCTAAA
GGATAATGGCAGTCTGTCATCCACACAATTTTCGTATTTCTCAAGTCTTAGATTACGCAATAACAAGAAGGGCAATAGAGGAGGCAAGAATTTTCGTAATGGTGAGGACA
AGGCATCTGCTCCTGCAGAAGTTGCTTCTGAATCTACTGAAGATAGCCAAGACAGTAATGACAAGCAACATTGGAAGAGAGTGGAGAGGCCCAAAAAAGTGCCGAACTCT
AATGATCAATATTTTGATGGCATATCGAGCACTTCTCAGATTTCGGACGATGCTGGAGTTTTCATTGAAAATGCAGATCAGCAGCATAGTGGAGGGTCTATGATGAGTCT
TAATGATCTTGATCTTACTGTTACTTGTGTTGGAGGGATGAATGTAGTTAACCTTGCTTCTCTCCAAGATTTTGTAGGTGACTATTTTGGAAAGGTCGCAACTTTCAACA
ACCTACAATCCTCTATTTCTTCTCAGTTGACTTCAGTAAGTAAAGACCGCCAATTGGAGGAGTGGAAACTTAATTTGGAGAAGATGTTACGTGACGAACAACATGCTCTT
GAGAAGAAAGATAAGCTTCAACGACAACATGCACGAATATTGCAAGAAGAGAAGGAGTTGGAAGCCAAACTTAAAGCTGCTCGGGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCTGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGTCGATGTCCGCCCAAGTATTCAGATCGATACTCTCAGGATTGGTT
GAGTATCTTTAGAAGACTTTACCCTTTCGGTTACCATCCTTTCGGGGATGACGCTTGCAAATTCTACGAGGAGGTTATTCCTAGCTATAAGGAATTGACAGAGTCAGGAT
CTTGTCTCACCATGCATTACGTTCATAGTTGGTTGGCTCGTTATTTCAACACTCATTATAAAACACCCATGGAGCTTCCGGGTCCTAAAATGGTTGAGTTTTCTAGTGAA
GGCGGTGCTAAATATTTCTATGATTTTGAGACTCGAAAATTGATTCATGGAGGTACGTCCATAGCATGGTTTATGAATGTTCACTCTAGGAATAAAGATGAACTTCTAAA
GGATAATGGCAGTCTGTCATCCACACAATTTTCGTATTTCTCAAGTCTTAGATTACGCAATAACAAGAAGGGCAATAGAGGAGGCAAGAATTTTCGTAATGGTGAGGACA
AGGCATCTGCTCCTGCAGAAGTTGCTTCTGAATCTACTGAAGATAGCCAAGACAGTAATGACAAGCAACATTGGAAGAGAGTGGAGAGGCCCAAAAAAGTGCCGAACTCT
AATGATCAATATTTTGATGGCATATCGAGCACTTCTCAGATTTCGGACGATGCTGGAGTTTTCATTGAAAATGCAGATCAGCAGCATAGTGGAGGGTCTATGATGAGTCT
TAATGATCTTGATCTTACTGTTACTTGTGTTGGAGGGATGAATGTAGTTAACCTTGCTTCTCTCCAAGATTTTGTAGGTGACTATTTTGGAAAGGTCGCAACTTTCAACA
ACCTACAATCCTCTATTTCTTCTCAGTTGACTTCAGTAAGTAAAGACCGCCAATTGGAGGAGTGGAAACTTAATTTGGAGAAGATGTTACGTGACGAACAACATGCTCTT
GAGAAGAAAGATAAGCTTCAACGACAACATGCACGAATATTGCAAGAAGAGAAGGAGTTGGAAGCCAAACTTAAAGCTGCTCGGGCTAAATGA
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAEVRPTGKLGGGRCPPKYSDRYSQDWLSIFRRLYPFGYHPFGDDACKFYEEVIPSYKELTESGSCLTMHYVHSWLARYFNTHYKTPMELPGPKMVEFSSE
GGAKYFYDFETRKLIHGGTSIAWFMNVHSRNKDELLKDNGSLSSTQFSYFSSLRLRNNKKGNRGGKNFRNGEDKASAPAEVASESTEDSQDSNDKQHWKRVERPKKVPNS
NDQYFDGISSTSQISDDAGVFIENADQQHSGGSMMSLNDLDLTVTCVGGMNVVNLASLQDFVGDYFGKVATFNNLQSSISSQLTSVSKDRQLEEWKLNLEKMLRDEQHAL
EKKDKLQRQHARILQEEKELEAKLKAARAK