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Moc04g12110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor bHLH160
Genome locationchr4:9141882..9147152
RNA-Seq ExpressionMoc04g12110
SyntenyMoc04g12110
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159073.1 transcription factor bHLH160 [Momordica charantia]1.1e-5053.75Show/hide
Query:  MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMK
        MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSK                    ASNSNANAKKEEHNAKERERRMK
Subjt:  MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMK

Query:  LSQTYFSLRSLLPNSRRS----------------------------------------------------------------------------------
        LSQTYFSLRSLLPNSRRS                                                                                  
Subjt:  LSQTYFSLRSLLPNSRRS----------------------------------------------------------------------------------

Query:  ---------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
                 KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
Subjt:  ---------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ

XP_022963582.1 transcription factor bHLH160 [Cucurbita moschata]1.2e-1245.97Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT
        MA+APWE      D+N G    E   L P    ++ G  I  +     AL+GLEE+      + N   P  + A+   +NAKKEEHNA+ER+RRM+LSQ 
Subjt:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT

Query:  YFSLRSLLPNSRRSKAEAEGITII
        YFSLRSLLPN+RRSK      TII
Subjt:  YFSLRSLLPNSRRSKAEAEGITII

XP_023553728.1 transcription factor bHLH160 [Cucurbita pepo subsp. pepo]4.7e-1245.16Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT
        MA+ PWE      D+N G    E   L P    ++ G  I  +     AL+GLEE+      + N   P  + A+   +NAKKEEHNA+ER+RRM+LSQ 
Subjt:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT

Query:  YFSLRSLLPNSRRSKAEAEGITII
        YFSLRSLLPN+RRSK      TII
Subjt:  YFSLRSLLPNSRRSKAEAEGITII

XP_031743831.1 transcription factor bHLH160 [Cucumis sativus]7.3e-1342.77Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENP---------PLFPIF---------------PPSINGNNIEETHFSKGALMGLEE-----------EKGNFTSPIG
        M+L PWEE IL ID++ G  E+ENP          L  IF               P  I G+ +E++      L+GLEE           E      P  
Subjt:  MALAPWEEDILNIDQNYGFVERENP---------PLFPIF---------------PPSINGNNIEETHFSKGALMGLEE-----------EKGNFTSPIG

Query:  V-----EASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEAEGITII
        +     E SNSN ANAKKEEHNA+ER+RR+KLS +YFSLRSLLPN+RRSK      TII
Subjt:  V-----EASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEAEGITII

XP_038888939.1 transcription factor bHLH160 [Benincasa hispida]5.6e-1330.8Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNN--IEETHFSK-----------------GALMGLE-------EEKGNFTSPIGVEASN----
        M+L  WEE IL +++N G  E ENP L  +   S++ NN  +EET  S+                   L+GLE       E++ +   P  +  +N    
Subjt:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNN--IEETHFSK-----------------GALMGLE-------EEKGNFTSPIGVEASN----

Query:  --SNANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRS------------------------------------------------------------
          + ANAKKEEHNA+ER+RRM+LS +YFSLRSLLPN+RRS                                                            
Subjt:  --SNANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRS------------------------------------------------------------

Query:  --------------------------------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
                                        KA+AEG+ IIGASTVSVS DH TL+ HLH+Q
Subjt:  --------------------------------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KGG0 BHLH domain-containing protein8.1e-2648.89Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENP---------PLFPIF---------------PPSINGNNIEETHFSKGALMGLEE-----------EKGNFTSPIG
        M+L PWEE IL ID++ G  E+ENP          L  IF               P  I G+ +E++      L+GLEE           E      P  
Subjt:  MALAPWEEDILNIDQNYGFVERENP---------PLFPIF---------------PPSINGNNIEETHFSKGALMGLEE-----------EKGNFTSPIG

Query:  V-----EASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
        +     E SNSN ANAKKEEHNA+ER+RR+KLS +YFSLRSLLPN+RRSKAEAEG+ IIGASTVSVS DH  LT HLH+Q
Subjt:  V-----EASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEAEGITIIGASTVSVSGDHPTLTCHLHVQ

A0A1S3BLZ5 transcription factor bHLH1001.9e-1150Show/hide
Query:  DQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEA
        D  YG +EREN  LFP  PPSIN +N                           E SNSN  NAKKEEHNA+ER+RR++LS +YFSLRSLLPN+RRSK   
Subjt:  DQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSN-ANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSKAEA

Query:  EGITII
           TII
Subjt:  EGITII

A0A6J1DXT5 transcription factor bHLH1605.6e-5153.75Show/hide
Query:  MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMK
        MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSK                    ASNSNANAKKEEHNAKERERRMK
Subjt:  MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMK

Query:  LSQTYFSLRSLLPNSRRS----------------------------------------------------------------------------------
        LSQTYFSLRSLLPNSRRS                                                                                  
Subjt:  LSQTYFSLRSLLPNSRRS----------------------------------------------------------------------------------

Query:  ---------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
                 KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ
Subjt:  ---------KAEAEGITIIGASTVSVSGDHPTLTCHLHVQ

A0A6J1HFM3 transcription factor bHLH1606.0e-1345.97Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT
        MA+APWE      D+N G    E   L P    ++ G  I  +     AL+GLEE+      + N   P  + A+   +NAKKEEHNA+ER+RRM+LSQ 
Subjt:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT

Query:  YFSLRSLLPNSRRSKAEAEGITII
        YFSLRSLLPN+RRSK      TII
Subjt:  YFSLRSLLPNSRRSKAEAEGITII

A0A6J1HVK8 transcription factor bHLH1603.0e-1244.35Show/hide
Query:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT
        MA+ PWE      D+N G  E + P           G+  E       AL+GLEE+      + N   P  + A+   +NAKKEEHNA+ER+RRM+LSQ 
Subjt:  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEE------KGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQT

Query:  YFSLRSLLPNSRRSKAEAEGITII
        YFSLRSLLPN+RRSK      TII
Subjt:  YFSLRSLLPNSRRSKAEAEGITII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.6e-0440.58Show/hide
Query:  EETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSK
        EET+ +  A+   +   G   S  G E  N+    KK  HNA ER+RR K++  + SLRS LP S +SK
Subjt:  EETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQTYFSLRSLLPNSRRSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATGGAAGGGAAGTGGAGTTTGAGTATGGCATTGGCACCATGGGAGGAGGATATATTGAATATTGATCAAAACTATGGATTTGTAGAGAGAGAAAACCCACCATT
ATTTCCAATATTTCCACCATCCATTAATGGCAATAATATTGAAGAAACCCATTTCTCCAAAGGTGCATTAATGGGTTTGGAGGAGGAGAAGGGGAATTTTACCTCTCCAA
TTGGAGTTGAAGCCTCAAATTCAAATGCAAATGCAAAGAAAGAGGAACACAATGCTAAGGAGAGAGAGAGGAGGATGAAGCTCTCTCAAACCTACTTTTCCCTTCGTTCA
TTGCTTCCAAATTCTAGACGATCAAAGGCTGAAGCAGAAGGCATCACAATCATTGGTGCTTCCACAGTTTCTGTTTCTGGAGATCATCCCACCCTCACCTGCCATTTGCA
TGTCCAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAATGGAAGGGAAGTGGAGTTTGAGTATGGCATTGGCACCATGGGAGGAGGATATATTGAATATTGATCAAAACTATGGATTTGTAGAGAGAGAAAACCCACCATT
ATTTCCAATATTTCCACCATCCATTAATGGCAATAATATTGAAGAAACCCATTTCTCCAAAGGTGCATTAATGGGTTTGGAGGAGGAGAAGGGGAATTTTACCTCTCCAA
TTGGAGTTGAAGCCTCAAATTCAAATGCAAATGCAAAGAAAGAGGAACACAATGCTAAGGAGAGAGAGAGGAGGATGAAGCTCTCTCAAACCTACTTTTCCCTTCGTTCA
TTGCTTCCAAATTCTAGACGATCAAAGGCTGAAGCAGAAGGCATCACAATCATTGGTGCTTCCACAGTTTCTGTTTCTGGAGATCATCCCACCCTCACCTGCCATTTGCA
TGTCCAGGGTTAG
Protein sequenceShow/hide protein sequence
MRMEGKWSLSMALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKGALMGLEEEKGNFTSPIGVEASNSNANAKKEEHNAKERERRMKLSQTYFSLRS
LLPNSRRSKAEAEGITIIGASTVSVSGDHPTLTCHLHVQG