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Moc04g12120 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12120
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Genome locationchr4:9154603..9155345
RNA-Seq ExpressionMoc04g12120
SyntenyMoc04g12120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV62041.1 DUF4219 domain-containing protein/UBN2 domain-containing protein [Cephalotus follicularis]5.7e-6758.27Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        ++QIK +KER+TRKA+A++CLYA VSPAIFNRI+A +SAK+IW FLK+EY+GDE+I+ +K LNL                            AR LG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--
        SDNRLVQKILVS+PER+EATIASLENTKDL + K+ E++SALQAQEQRRLMR EGS EGAL AK Q+   G+ KKWKGKK +GS  SE+AA     GN  
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--

Query:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGA
               +C+H  K NHP FR W+RP+V+CR+CH LGHIERFCK  + QQQG A
Subjt:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGA

GAV76108.1 DUF4219 domain-containing protein/UBN2 domain-containing protein [Cephalotus follicularis]1.8e-6858.53Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        ++QIK +KER+TRKA+A++CLYA VSPAIF+RIMA +SAK+IW FLKSEY+GDE+I+ +K LNL                            AR LG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--
        SDNRLVQKILVS+PER+EATIASLENT DL + K+ E++SALQAQEQRRLMR EGS EGAL AK Q+  GG+ KKWKGKK +GS  SE+AA     GN  
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--

Query:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV
               +C+H  K NHP FR W+RP+V+CR+CH L HIERFCK  + QQQG A+AAV
Subjt:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV

KAA0042872.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.7e-7268Show/hide
Query:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV
        KA+ARACL+ AVS  IFN++MAL+SAKEIW+FLKSEYEG ERIK +KVLNL                             RALG DLSD+RLVQKILVSV
Subjt:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV

Query:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR
        P+RYEATIASLENTKDL K KVIEVVS LQ QEQRRLMRQEGSIEGALKA+MQ+GEGG+ KKWKG K +G S +ES AKDVG+ACKH  K NHP FR WR
Subjt:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR

Query:  RPNVKCRRCHLLGHIERFCKGVKTQ
         P+VKCRR +LLGHIER CK V TQ
Subjt:  RPNVKCRRCHLLGHIERFCKGVKTQ

XP_008450210.1 PREDICTED: uncharacterized protein LOC103491872 [Cucumis melo]1.4e-6568.57Show/hide
Query:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV
        KA+ARACL+ AVSP IFNR+MAL+SAKEIW+FLKSEYEG ERIK +KVLNL                             RALG DLSD+RLVQKILVSV
Subjt:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV

Query:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR
        P+RYEATIASLENTKDL K KVIEVVSALQ QEQRRLMRQEGSIEGALKA+MQ+GEGG+ KKWKG K +G S  ES AKDVG+ACKH  K NHP FR WR
Subjt:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR

Query:  RPNVKCRRCH
         P+VKCR  H
Subjt:  RPNVKCRRCH

XP_022148138.1 uncharacterized protein LOC111016891 [Momordica charantia]2.5e-8673.28Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        MH+I THKERVTRK +A ACL AAVSPAIFNRIMALKSAKEIW+FLK+EYEG+ERIK +KVLNL                            ARALG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKH
        S NRLVQKILVSVPERYEATIASLENTKDL K KVIEVVS LQAQEQRRL+ QEGS+EGALKA+MQ GEGGR  KWKGKKASGSS SE A+KDVG+ACKH
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKH

Query:  RKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV
          K+NHP FR WRRP VKCR C+LLGHIERF KG KTQQQGGA+AAV
Subjt:  RKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV

TrEMBL top hitse value%identityAlignment
A0A1Q3B201 DUF4219 domain-containing protein/UBN2 domain-containing protein2.8e-6758.27Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        ++QIK +KER+TRKA+A++CLYA VSPAIFNRI+A +SAK+IW FLK+EY+GDE+I+ +K LNL                            AR LG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--
        SDNRLVQKILVS+PER+EATIASLENTKDL + K+ E++SALQAQEQRRLMR EGS EGAL AK Q+   G+ KKWKGKK +GS  SE+AA     GN  
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--

Query:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGA
               +C+H  K NHP FR W+RP+V+CR+CH LGHIERFCK  + QQQG A
Subjt:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGA

A0A1Q3C7Q5 DUF4219 domain-containing protein/UBN2 domain-containing protein8.6e-6958.53Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        ++QIK +KER+TRKA+A++CLYA VSPAIF+RIMA +SAK+IW FLKSEY+GDE+I+ +K LNL                            AR LG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--
        SDNRLVQKILVS+PER+EATIASLENT DL + K+ E++SALQAQEQRRLMR EGS EGAL AK Q+  GG+ KKWKGKK +GS  SE+AA     GN  
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAA--KDVGN--

Query:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV
               +C+H  K NHP FR W+RP+V+CR+CH L HIERFCK  + QQQG A+AAV
Subjt:  -------ACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV

A0A1S3BNQ3 uncharacterized protein LOC1034918726.8e-6668.57Show/hide
Query:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV
        KA+ARACL+ AVSP IFNR+MAL+SAKEIW+FLKSEYEG ERIK +KVLNL                             RALG DLSD+RLVQKILVSV
Subjt:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV

Query:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR
        P+RYEATIASLENTKDL K KVIEVVSALQ QEQRRLMRQEGSIEGALKA+MQ+GEGG+ KKWKG K +G S  ES AKDVG+ACKH  K NHP FR WR
Subjt:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR

Query:  RPNVKCRRCH
         P+VKCR  H
Subjt:  RPNVKCRRCH

A0A5D3C1N2 Retrovirus-related Pol polyprotein from transposon TNT 1-943.7e-7268Show/hide
Query:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV
        KA+ARACL+ AVS  IFN++MAL+SAKEIW+FLKSEYEG ERIK +KVLNL                             RALG DLSD+RLVQKILVSV
Subjt:  KARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDLSDNRLVQKILVSV

Query:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR
        P+RYEATIASLENTKDL K KVIEVVS LQ QEQRRLMRQEGSIEGALKA+MQ+GEGG+ KKWKG K +G S +ES AKDVG+ACKH  K NHP FR WR
Subjt:  PERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWR

Query:  RPNVKCRRCHLLGHIERFCKGVKTQ
         P+VKCRR +LLGHIER CK V TQ
Subjt:  RPNVKCRRCHLLGHIERFCKGVKTQ

A0A6J1D394 uncharacterized protein LOC1110168911.2e-8673.28Show/hide
Query:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL
        MH+I THKERVTRK +A ACL AAVSPAIFNRIMALKSAKEIW+FLK+EYEG+ERIK +KVLNL                            ARALG DL
Subjt:  MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNL----------------------------ARALGIDL

Query:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKH
        S NRLVQKILVSVPERYEATIASLENTKDL K KVIEVVS LQAQEQRRL+ QEGS+EGALKA+MQ GEGGR  KWKGKKASGSS SE A+KDVG+ACKH
Subjt:  SDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEVVSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKH

Query:  RKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV
          K+NHP FR WRRP VKCR C+LLGHIERF KG KTQQQGGA+AAV
Subjt:  RKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCAGATCAAGACTCACAAGGAGAGGGTCACCAGGAAGGCAAGGGCTCGGGCTTGCCTATATGCAGCTGTGTCTCCCGCCATATTCAACAGAATTATGGCCTTGAA
GTCAGCAAAGGAGATCTGGCAGTTTCTCAAAAGTGAGTATGAAGGCGATGAGAGGATTAAAGACATTAAGGTGCTGAACTTGGCAAGAGCATTAGGAATTGATCTATCTG
ACAATAGATTGGTTCAGAAGATTCTGGTTTCAGTACCTGAGAGATATGAAGCAACCATTGCTTCCTTAGAGAATACTAAAGACCTCTTCAAATTCAAAGTGATAGAAGTT
GTTAGTGCTTTGCAAGCACAGGAGCAGAGGAGGTTGATGAGGCAAGAAGGAAGCATTGAGGGGGCACTAAAAGCTAAAATGCAGGAGGGAGAAGGTGGAAGAGTGAAGAA
GTGGAAAGGGAAGAAGGCGAGTGGCAGCAGTATCTCAGAATCTGCTGCAAAGGATGTTGGTAATGCATGCAAGCACCGCAAGAAGTACAATCATCCACAATTCAGATTCT
GGAGAAGGCCAAATGTGAAGTGTAGAAGGTGTCATTTATTAGGACACATTGAACGGTTTTGTAAAGGTGTCAAGACTCAACAACAAGGAGGAGCATATGCTGCAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCAGATCAAGACTCACAAGGAGAGGGTCACCAGGAAGGCAAGGGCTCGGGCTTGCCTATATGCAGCTGTGTCTCCCGCCATATTCAACAGAATTATGGCCTTGAA
GTCAGCAAAGGAGATCTGGCAGTTTCTCAAAAGTGAGTATGAAGGCGATGAGAGGATTAAAGACATTAAGGTGCTGAACTTGGCAAGAGCATTAGGAATTGATCTATCTG
ACAATAGATTGGTTCAGAAGATTCTGGTTTCAGTACCTGAGAGATATGAAGCAACCATTGCTTCCTTAGAGAATACTAAAGACCTCTTCAAATTCAAAGTGATAGAAGTT
GTTAGTGCTTTGCAAGCACAGGAGCAGAGGAGGTTGATGAGGCAAGAAGGAAGCATTGAGGGGGCACTAAAAGCTAAAATGCAGGAGGGAGAAGGTGGAAGAGTGAAGAA
GTGGAAAGGGAAGAAGGCGAGTGGCAGCAGTATCTCAGAATCTGCTGCAAAGGATGTTGGTAATGCATGCAAGCACCGCAAGAAGTACAATCATCCACAATTCAGATTCT
GGAGAAGGCCAAATGTGAAGTGTAGAAGGTGTCATTTATTAGGACACATTGAACGGTTTTGTAAAGGTGTCAAGACTCAACAACAAGGAGGAGCATATGCTGCAGTATAG
Protein sequenceShow/hide protein sequence
MHQIKTHKERVTRKARARACLYAAVSPAIFNRIMALKSAKEIWQFLKSEYEGDERIKDIKVLNLARALGIDLSDNRLVQKILVSVPERYEATIASLENTKDLFKFKVIEV
VSALQAQEQRRLMRQEGSIEGALKAKMQEGEGGRVKKWKGKKASGSSISESAAKDVGNACKHRKKYNHPQFRFWRRPNVKCRRCHLLGHIERFCKGVKTQQQGGAYAAV