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Moc04g12140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGlycine cleavage T-protein family
Genome locationchr4:9169126..9175886
RNA-Seq ExpressionMoc04g12140
SyntenyMoc04g12140
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013977 - Glycine cleavage T-protein, C-terminal barrel domain
IPR017703 - YgfZ/GcvT conserved site
IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022574.1 putative transferase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]7.0e-5582.09Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDG++VGKLTSYTPGRKGLEHFGLGYIKKRAAS+G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI
        DTVIVGENTIG        F+ R   ++ + SN+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI

XP_022158902.1 LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic [Momordica charantia]5.7e-57100Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIG
        DTVIVGENTIG
Subjt:  DTVIVGENTIG

XP_022927742.1 putative transferase At1g60990, chloroplastic [Cucurbita moschata]7.0e-5581.16Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNILQRA
        DTVIVGENTIG        F+     ++ S SN+ +R+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNILQRA

XP_022988791.1 putative transferase At1g60990, chloroplastic [Cucurbita maxima]1.4e-5583.58Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS+G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI
        DTVIVGENTIG        F+ R   ++ S SN+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI

XP_023531687.1 putative transferase At1g60990, chloroplastic [Cucurbita pepo subsp. pepo]2.4e-5583.58Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS+G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI
        DTVIVGENTIG        F+ R   ++ S SN+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI

TrEMBL top hitse value%identityAlignment
A0A0A0KJI9 Uncharacterized protein4.6e-5292.79Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGKRVGKLTSY PGRK  EHFGLGYIKK+AAS G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIG
        D+VIVGENTIG
Subjt:  DTVIVGENTIG

A0A5A7UN60 Putative transferase1.3e-5191.07Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP+PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGKRVGKLTSY PGRK  EHFGLGYIKK+AAS G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGS
        DTVIVGE+T G+
Subjt:  DTVIVGENTIGS

A0A6J1DYD6 LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic2.8e-57100Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIG
        DTVIVGENTIG
Subjt:  DTVIVGENTIG

A0A6J1EI20 putative transferase At1g60990, chloroplastic3.4e-5581.16Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNILQRA
        DTVIVGENTIG        F+     ++ S SN+ +R+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNILQRA

A0A6J1JI89 putative transferase At1g60990, chloroplastic6.8e-5683.58Show/hide
Query:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG
        MP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS+G
Subjt:  MPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNG

Query:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI
        DTVIVGENTIG        F+ R   ++ S SN+
Subjt:  DTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNI

SwissProt top hitse value%identityAlignment
Q1INT8 Aminomethyltransferase9.0e-0529.73Show/hide
Query:  RMPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSS---ITIDGKRVGKLT--SYTPGRKGLEHFGLGYIKK
        ++P    E++DE NV EAGL   + ++KG + G+  + +    DGVK+ L GL+  +   P      + ++GK +G +T  SY P  K   +  L Y+  
Subjt:  RMPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSS---ITIDGKRVGKLT--SYTPGRKGLEHFGLGYIKK

Query:  RAASNGDTVIV
          ++  + V V
Subjt:  RAASNGDTVIV

Q67N36 Aminomethyltransferase5.8e-0428.83Show/hide
Query:  RMPTPQKELTDEFNVLEAGLWNSISLNKGC-YKGQETISRLITYDGVKQRLWGLQLSDSVEP--GSSITIDGKRVGKLT--SYTPGRKGLEHFGLGYIKK
        ++P    E++D+ N LEAGL  ++ L KG  + G++ ++R I   G  ++L G+++ D   P  G  + + G+ VG++T  S++P  +  ++  L Y+  
Subjt:  RMPTPQKELTDEFNVLEAGLWNSISLNKGC-YKGQETISRLITYDGVKQRLWGLQLSDSVEP--GSSITIDGKRVGKLT--SYTPGRKGLEHFGLGYIKK

Query:  RAASNGDTVIV
          ++ G  V V
Subjt:  RAASNGDTVIV

Q681Y3 Putative transferase At1g60990, chloroplastic1.1e-4274.55Show/hide
Query:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD
        P P++EL+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS+IT+DGK+VGKLTSYT G+ G  HFGLGYIKK+AAS G+
Subjt:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD

Query:  TVIVGENTIG
        TV VGE+  G
Subjt:  TVIVGENTIG

Arabidopsis top hitse value%identityAlignment
AT1G60990.1 Glycine cleavage T-protein family7.7e-4474.55Show/hide
Query:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD
        P P++EL+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS+IT+DGK+VGKLTSYT G+ G  HFGLGYIKK+AAS G+
Subjt:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD

Query:  TVIVGENTIG
        TV VGE+  G
Subjt:  TVIVGENTIG

AT1G60990.2 Glycine cleavage T-protein family7.7e-4474.55Show/hide
Query:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD
        P P++EL+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS+IT+DGK+VGKLTSYT G+ G  HFGLGYIKK+AAS G+
Subjt:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD

Query:  TVIVGENTIG
        TV VGE+  G
Subjt:  TVIVGENTIG

AT1G60990.3 Glycine cleavage T-protein family7.7e-4474.55Show/hide
Query:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD
        P P++EL+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS+IT+DGK+VGKLTSYT G+ G  HFGLGYIKK+AAS G+
Subjt:  PTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGD

Query:  TVIVGENTIG
        TV VGE+  G
Subjt:  TVIVGENTIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGGTGACATGGCGATGAACGGCAACAGAATGCCAACTCCTCAGAAAGAGCTTACCGATGAGTTCAATGTACTCGAAGCTGGTCTTTGGAATTCAATTTCTCT
CAACAAGGGTTGTTACAAGGGACAAGAGACAATATCTAGACTAATAACATATGATGGAGTAAAACAGAGATTATGGGGACTTCAGCTATCAGATTCAGTGGAACCAGGCA
GCTCAATAACCATTGACGGAAAAAGGGTGGGAAAGCTGACAAGCTATACACCAGGAAGAAAAGGGTTGGAGCATTTCGGTCTTGGCTACATCAAGAAGCGAGCTGCTTCC
AATGGAGACACTGTAATTGTTGGGGAAAACACCATTGGTAGCACAGGTAGCCAGTATGATGAGTTCATTCTGAGGAACTTCACAGTGGCTGGCAGTGGCAGTAATATCCT
TCAAAGAGCTTGGAAGTGCCATTTTCATTATATTCCATCTCTATTGCAACTCCATATGCATCATTCATTCAGTGTGTTTTGTGGTGCTATTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACGGTGACATGGCGATGAACGGCAACAGAATGCCAACTCCTCAGAAAGAGCTTACCGATGAGTTCAATGTACTCGAAGCTGGTCTTTGGAATTCAATTTCTCT
CAACAAGGGTTGTTACAAGGGACAAGAGACAATATCTAGACTAATAACATATGATGGAGTAAAACAGAGATTATGGGGACTTCAGCTATCAGATTCAGTGGAACCAGGCA
GCTCAATAACCATTGACGGAAAAAGGGTGGGAAAGCTGACAAGCTATACACCAGGAAGAAAAGGGTTGGAGCATTTCGGTCTTGGCTACATCAAGAAGCGAGCTGCTTCC
AATGGAGACACTGTAATTGTTGGGGAAAACACCATTGGTAGCACAGGTAGCCAGTATGATGAGTTCATTCTGAGGAACTTCACAGTGGCTGGCAGTGGCAGTAATATCCT
TCAAAGAGCTTGGAAGTGCCATTTTCATTATATTCCATCTCTATTGCAACTCCATATGCATCATTCATTCAGTGTGTTTTGTGGTGCTATTGTGTGA
Protein sequenceShow/hide protein sequence
MADGDMAMNGNRMPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAAS
NGDTVIVGENTIGSTGSQYDEFILRNFTVAGSGSNILQRAWKCHFHYIPSLLQLHMHHSFSVFCGAIV